FFCP PHASE1:Mm9::chr16:97392672..97392710,-: Difference between revisions
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{{FFCP|EntrezGene=13508|HGNC=|MCL_coexpression_id=278|UniProt=Q9ERC8|association_with_transcript=-313bp_to_ENSMUST00000056102_5end|description=CAGE_peak_4_at_Dscam_5end|id=chr16:97392672..97392710,-|ontology_enrichment_celltype=CL:0000117!2.88e-18!23;CL:0000337!2.88e-18!23;CL:0000540!1.20e-15!33;CL:0000047!1.20e-15!33;CL:0000031!1.20e-15!33;CL:0000404!1.20e-15!33;CL:0000393!9.17e-14!39;CL:0000211!9.17e-14!39;CL:0002319!4.01e-11!43;CL:0000221!1.31e-10!44;CL:0000133!1.31e-10!44;CL:0000055!1.02e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.44e-32,23;CL:0000337,3.44e-32,23;CL:0000540,3.60e-22,33;CL:0000047,3.60e-22,33;CL:0000031,3.60e-22,33;CL:0000404,3.60e-22,33;CL:0000393,1.07e-17,39;CL:0000211,1.07e-17,39;CL:0002319,2.02e-15,43;CL:0000221,6.42e-15,44;CL:0000133,6.42e-15,44;CL:0002609,4.80e-09,6;CL:0002321,4.84e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.67e-34!73;UBERON:0005743!5.67e-34!73;UBERON:0000073!2.32e-32!75;UBERON:0001016!2.32e-32!75;UBERON:0001049!1.06e-29!52;UBERON:0005068!1.06e-29!52;UBERON:0006241!1.06e-29!52;UBERON:0007135!1.06e-29!52;UBERON:0000955!1.80e-28!50;UBERON:0006238!1.80e-28!50;UBERON:0000033!4.36e-28!63;UBERON:0002616!1.84e-27!49;UBERON:0003056!3.41e-26!49;UBERON:0002346!3.93e-26!71;UBERON:0003075!3.93e-26!71;UBERON:0007284!3.93e-26!71;UBERON:0004121!1.92e-25!102;UBERON:0000924!1.92e-25!102;UBERON:0006601!1.92e-25!102;UBERON:0003080!2.21e-24!40;UBERON:0002780!1.83e-23!39;UBERON:0001890!1.83e-23!39;UBERON:0006240!1.83e-23!39;UBERON:0002020!1.85e-22!34;UBERON:0002791!8.06e-19!29;UBERON:0003528!8.06e-19!29;UBERON:0001893!8.06e-19!29;UBERON:0007811!2.20e-15!86;UBERON:0000153!1.29e-13!94;UBERON:0000956!4.88e-13!21;UBERON:0001869!4.88e-13!21;UBERON:0000203!4.88e-13!21;UBERON:0002619!6.81e-10!17;UBERON:0002021!5.91e-09!10;UBERON:0000411!5.91e-09!10;UBERON:0001950!5.91e-09!10;UBERON:0002420!5.01e-07!8;UBERON:0007245!5.01e-07!8;UBERON:0010009!5.01e-07!8;UBERON:0010011!5.01e-07!8;UBERON:0000454!5.01e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.77e-53,54;UBERON:0001049,2.05e-50,52;UBERON:0005068,2.05e-50,52;UBERON:0006241,2.05e-50,52;UBERON:0007135,2.05e-50,52;UBERON:0001017,3.28e-50,73;UBERON:0001016,1.58e-48,75;UBERON:0000955,1.14e-43,47;UBERON:0006238,1.14e-43,47;UBERON:0002346,1.47e-42,64;UBERON:0003075,1.47e-42,64;UBERON:0007284,1.47e-42,64;UBERON:0002616,7.02e-42,46;UBERON:0003080,1.52e-41,40;UBERON:0002020,4.62e-41,34;UBERON:0002780,7.12e-40,39;UBERON:0001890,7.12e-40,39;UBERON:0006240,7.12e-40,39;UBERON:0004121,9.89e-39,95;UBERON:0000924,9.89e-39,95;UBERON:0006601,9.89e-39,95;UBERON:0003056,6.00e-36,49;UBERON:0010371,7.99e-36,73;UBERON:0003528,2.48e-34,29;UBERON:0002791,2.48e-34,29;UBERON:0001893,2.48e-34,29;UBERON:0010314,6.11e-26,92;UBERON:0000956,1.21e-23,21;UBERON:0001869,1.21e-23,21;UBERON:0000203,1.21e-23,21;UBERON:0002619,8.02e-18,17;UBERON:0000025,1.23e-16,114;UBERON:0002021,4.28e-15,10;UBERON:0000411,4.28e-15,10;UBERON:0001950,4.28e-15,10;UBERON:0004111,8.55e-15,122;UBERON:0002420,1.41e-11,8;UBERON:0007245,1.41e-11,8;UBERON:0010009,1.41e-11,8;UBERON:0010011,1.41e-11,8;UBERON:0000454,1.41e-11,8;UBERON:0011216,8.27e-11,194;UBERON:0002240,5.70e-09,6;UBERON:0005174,5.70e-09,6;UBERON:0001137,5.70e-09,6;UBERON:0003076,7.31e-09,12;UBERON:0003057,7.31e-09,12;UBERON:0000483,3.41e-08,174;UBERON:0000119,5.67e-08,176;UBERON:0000369,1.18e-07,5;UBERON:0002435,1.18e-07,5;UBERON:0000204,1.18e-07,5;UBERON:0010082,1.18e-07,5;UBERON:0001948,1.26e-07,5;UBERON:0002315,1.26e-07,5;UBERON:0002950,4.88e-07,4;UBERON:0001891,4.88e-07,4;UBERON:0009616,4.88e-07,4;UBERON:0010286,4.88e-07,4;UBERON:0001894,8.17e-07,10;UBERON:0006222,8.17e-07,10|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0.57423196411502,0,0.430942465371778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,6.67644320836673,5.81890077199236,5.70448263155561,0,0,0,0,0,0.898800331555214,0.384218305321555,4.97710139080693,5.13022565660425,4.83747411108179,2.85650984403804,2.20868540951614,2.44981598429908,1.24599112323707,1.83843757322004,2.20231761998777,4.97980618532232,4.30098293117482,3.42904348098504,3.65950574409639,1.56274011167028,2.23346399201105,3.93933827022176,4.88954392885792,4.71405736757868,2.98980529678116,2.60959224155421,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,2.09446706813455,0,0,0,0,5.24267237916879,3.66000482254901,2.76439574648302,3.30266208365325,4.60287823194595,4.1557608911912,5.67844420737152,0,0,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0.452114453507145,0.612328492361951,1.2811372028485,1.12442069471675,0.776110112217047,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.25724871410318,2.05809224758569,0,0,0,0,0,0.201683524623343,0,0.1902256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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13508 | |||
|HGNC= | |||
|MCL_coexpression_id=278 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9ERC8 | |||
|association_with_transcript=-313bp_to_ENSMUST00000056102_5end | |||
|cluster_id=chr16:97392672..97392710,- | |||
|description=CAGE_peak_4_at_Dscam_5end | |||
|id=chr16:97392672..97392710,- | |||
|ontology_enrichment_celltype=CL:0000117!2.88e-18!23;CL:0000337!2.88e-18!23;CL:0000540!1.20e-15!33;CL:0000047!1.20e-15!33;CL:0000031!1.20e-15!33;CL:0000404!1.20e-15!33;CL:0000393!9.17e-14!39;CL:0000211!9.17e-14!39;CL:0002319!4.01e-11!43;CL:0000221!1.31e-10!44;CL:0000133!1.31e-10!44;CL:0000055!1.02e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.44e-32,23;CL:0000337,3.44e-32,23;CL:0000540,3.60e-22,33;CL:0000047,3.60e-22,33;CL:0000031,3.60e-22,33;CL:0000404,3.60e-22,33;CL:0000393,1.07e-17,39;CL:0000211,1.07e-17,39;CL:0002319,2.02e-15,43;CL:0000221,6.42e-15,44;CL:0000133,6.42e-15,44;CL:0002609,4.80e-09,6;CL:0002321,4.84e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.67e-34!73;UBERON:0005743!5.67e-34!73;UBERON:0000073!2.32e-32!75;UBERON:0001016!2.32e-32!75;UBERON:0001049!1.06e-29!52;UBERON:0005068!1.06e-29!52;UBERON:0006241!1.06e-29!52;UBERON:0007135!1.06e-29!52;UBERON:0000955!1.80e-28!50;UBERON:0006238!1.80e-28!50;UBERON:0000033!4.36e-28!63;UBERON:0002616!1.84e-27!49;UBERON:0003056!3.41e-26!49;UBERON:0002346!3.93e-26!71;UBERON:0003075!3.93e-26!71;UBERON:0007284!3.93e-26!71;UBERON:0004121!1.92e-25!102;UBERON:0000924!1.92e-25!102;UBERON:0006601!1.92e-25!102;UBERON:0003080!2.21e-24!40;UBERON:0002780!1.83e-23!39;UBERON:0001890!1.83e-23!39;UBERON:0006240!1.83e-23!39;UBERON:0002020!1.85e-22!34;UBERON:0002791!8.06e-19!29;UBERON:0003528!8.06e-19!29;UBERON:0001893!8.06e-19!29;UBERON:0007811!2.20e-15!86;UBERON:0000153!1.29e-13!94;UBERON:0000956!4.88e-13!21;UBERON:0001869!4.88e-13!21;UBERON:0000203!4.88e-13!21;UBERON:0002619!6.81e-10!17;UBERON:0002021!5.91e-09!10;UBERON:0000411!5.91e-09!10;UBERON:0001950!5.91e-09!10;UBERON:0002420!5.01e-07!8;UBERON:0007245!5.01e-07!8;UBERON:0010009!5.01e-07!8;UBERON:0010011!5.01e-07!8;UBERON:0000454!5.01e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.77e-53,54;UBERON:0001049,2.05e-50,52;UBERON:0005068,2.05e-50,52;UBERON:0006241,2.05e-50,52;UBERON:0007135,2.05e-50,52;UBERON:0001017,3.28e-50,73;UBERON:0001016,1.58e-48,75;UBERON:0000955,1.14e-43,47;UBERON:0006238,1.14e-43,47;UBERON:0002346,1.47e-42,64;UBERON:0003075,1.47e-42,64;UBERON:0007284,1.47e-42,64;UBERON:0002616,7.02e-42,46;UBERON:0003080,1.52e-41,40;UBERON:0002020,4.62e-41,34;UBERON:0002780,7.12e-40,39;UBERON:0001890,7.12e-40,39;UBERON:0006240,7.12e-40,39;UBERON:0004121,9.89e-39,95;UBERON:0000924,9.89e-39,95;UBERON:0006601,9.89e-39,95;UBERON:0003056,6.00e-36,49;UBERON:0010371,7.99e-36,73;UBERON:0003528,2.48e-34,29;UBERON:0002791,2.48e-34,29;UBERON:0001893,2.48e-34,29;UBERON:0010314,6.11e-26,92;UBERON:0000956,1.21e-23,21;UBERON:0001869,1.21e-23,21;UBERON:0000203,1.21e-23,21;UBERON:0002619,8.02e-18,17;UBERON:0000025,1.23e-16,114;UBERON:0002021,4.28e-15,10;UBERON:0000411,4.28e-15,10;UBERON:0001950,4.28e-15,10;UBERON:0004111,8.55e-15,122;UBERON:0002420,1.41e-11,8;UBERON:0007245,1.41e-11,8;UBERON:0010009,1.41e-11,8;UBERON:0010011,1.41e-11,8;UBERON:0000454,1.41e-11,8;UBERON:0011216,8.27e-11,194;UBERON:0002240,5.70e-09,6;UBERON:0005174,5.70e-09,6;UBERON:0001137,5.70e-09,6;UBERON:0003076,7.31e-09,12;UBERON:0003057,7.31e-09,12;UBERON:0000483,3.41e-08,174;UBERON:0000119,5.67e-08,176;UBERON:0000369,1.18e-07,5;UBERON:0002435,1.18e-07,5;UBERON:0000204,1.18e-07,5;UBERON:0010082,1.18e-07,5;UBERON:0001948,1.26e-07,5;UBERON:0002315,1.26e-07,5;UBERON:0002950,4.88e-07,4;UBERON:0001891,4.88e-07,4;UBERON:0009616,4.88e-07,4;UBERON:0010286,4.88e-07,4;UBERON:0001894,8.17e-07,10;UBERON:0006222,8.17e-07,10 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0.57423196411502,0,0.430942465371778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,6.67644320836673,5.81890077199236,5.70448263155561,0,0,0,0,0,0.898800331555214,0.384218305321555,4.97710139080693,5.13022565660425,4.83747411108179,2.85650984403804,2.20868540951614,2.44981598429908,1.24599112323707,1.83843757322004,2.20231761998777,4.97980618532232,4.30098293117482,3.42904348098504,3.65950574409639,1.56274011167028,2.23346399201105,3.93933827022176,4.88954392885792,4.71405736757868,2.98980529678116,2.60959224155421,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,2.09446706813455,0,0,0,0,5.24267237916879,3.66000482254901,2.76439574648302,3.30266208365325,4.60287823194595,4.1557608911912,5.67844420737152,0,0,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0.452114453507145,0.612328492361951,1.2811372028485,1.12442069471675,0.776110112217047,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.25724871410318,2.05809224758569,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0.329397909448022,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72936002979246,3.39913891117389,0,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0,0,0,0.584511715822624,1.18586333383957,9.3183181762324,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,16.000661470428,0,0.129358683782755,0.857348140126369,2.30542303734956,2.49716344642899,1.15184314421485,1.522324745573,0,0,0,0,0.161464426695906,0.180938774784468,0,0,0,3.8939313422207,0.170870880797853,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,1.64836461840539,0.428736758158132,0,5.64751842617067,4.60325236507177,4.01026859407578,5.499301834998,3.42541259885321,3.0215755895588,5.40018000185445,2.70192721934532,3.17199686288943,2.07104124700728,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.367687016900028,0.666740183404846,0.824140228955577,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.842773567228942,0.768301828858431,1.03383844120104,0.476293691283074,0.695305955669133,0.578727661391115,1.23625770240992,0.735994600671987,0,0,0.476872379894642,0.436039249896986,0.658765662907314,0.676916863133412,0.548783918618318,1.05227884575137,0.271608227691724,0.561142271657738,0.237270036248348,0.788035859004508,0.818462086339379,0.77468420592983,0.385813221962283,0.999242311751784,0.233931608445408,0.644613162144895,0.382576664137687,0.220591419119515,0 | |||
|short_description=p4@Dscam | |||
}} |
Revision as of 06:49, 4 August 2015
Short description: | p4@Dscam |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Dscam_5end |
Coexpression cluster: | MCL_coexpression_mm9:278 |
Association with transcript: | -313bp_to_ENSMUST00000056102_5end |
EntrezGene: | 13508 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.44e-32 | 23 |
neuroblast (sensu Vertebrata) | 3.44e-32 | 23 |
neuron | 3.60e-22 | 33 |
neuronal stem cell | 3.60e-22 | 33 |
neuroblast | 3.60e-22 | 33 |
electrically signaling cell | 3.60e-22 | 33 |
electrically responsive cell | 1.07e-17 | 39 |
electrically active cell | 1.07e-17 | 39 |
neural cell | 2.02e-15 | 43 |
ectodermal cell | 6.42e-15 | 44 |
neurectodermal cell | 6.42e-15 | 44 |
neuron of cerebral cortex | 4.80e-09 | 6 |
embryonic cell | 4.84e-07 | 70 |