FFCP PHASE1:Mm9::chr16:33967118..33967129,-: Difference between revisions
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{{FFCP|EntrezGene=22247|HGNC=|UniProt=P13439|association_with_transcript=0bp_to_ENSMUST00000023510_5end|description=CAGE_peak_2_at_Umps_5end|id=chr16:33967118..33967129,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000949!7.68e-14!72;UBERON:0004119!8.08e-13!130;UBERON:0000925!8.08e-13!130;UBERON:0006595!8.08e-13!130;UBERON:0000077!2.89e-12!97;UBERON:0001007!3.34e-12!128;UBERON:0001555!3.34e-12!128;UBERON:0007026!3.34e-12!128;UBERON:0001041!7.25e-12!92;UBERON:0004921!1.11e-11!126;UBERON:0004185!1.11e-11!126;UBERON:0003104!1.44e-11!131;UBERON:0009142!1.44e-11!131;UBERON:0005172!8.04e-11!49;UBERON:0005173!8.04e-11!49;UBERON:0002417!8.04e-11!49;UBERON:0000916!8.04e-11!49;UBERON:0002107!1.07e-09!22;UBERON:0007499!1.07e-09!22;UBERON:0006925!1.07e-09!22;UBERON:0009497!1.07e-09!22;UBERON:0000015!1.07e-09!22;UBERON:0002423!1.07e-09!22;UBERON:0006235!1.07e-09!22;UBERON:0008835!1.07e-09!22;UBERON:0003894!1.07e-09!22;UBERON:0004161!1.07e-09!22;UBERON:0008836!1.07e-09!22;UBERON:0005177!1.78e-09!85;UBERON:0002365!4.84e-09!25;UBERON:0002330!4.84e-09!25;UBERON:0002368!5.33e-09!60;UBERON:0009854!6.26e-09!23;UBERON:0009856!6.26e-09!23;UBERON:0005057!8.05e-09!51;UBERON:0002530!2.31e-08!65;UBERON:0002075!4.86e-08!19;UBERON:0009569!1.41e-07!66;UBERON:0002100!2.03e-07!98;UBERON:0000466!2.11e-07!79;UBERON:0005409!2.15e-07!59;UBERON:0005256!4.69e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0000949,6.69e-14,72;UBERON:0005177,2.55e-12,79;UBERON:0005172,6.99e-11,49;UBERON:0005173,6.99e-11,49;UBERON:0002417,6.99e-11,49;UBERON:0000916,6.99e-11,49;UBERON:0002100,1.90e-10,90;UBERON:0002107,1.07e-09,22;UBERON:0007499,1.07e-09,22;UBERON:0006925,1.07e-09,22;UBERON:0009497,1.07e-09,22;UBERON:0000015,1.07e-09,22;UBERON:0002423,1.07e-09,22;UBERON:0006235,1.07e-09,22;UBERON:0008835,1.07e-09,22;UBERON:0003894,1.07e-09,22;UBERON:0004161,1.07e-09,22;UBERON:0008836,1.07e-09,22;UBERON:0002368,4.75e-09,60;UBERON:0002365,4.82e-09,25;UBERON:0002330,4.82e-09,25;UBERON:0009854,6.23e-09,23;UBERON:0009856,6.23e-09,23;UBERON:0004119,1.96e-08,118;UBERON:0000925,1.96e-08,118;UBERON:0006595,1.96e-08,118;UBERON:0002530,2.19e-08,65;UBERON:0005256,4.82e-08,45;UBERON:0002075,4.85e-08,19;UBERON:0001007,6.20e-08,116;UBERON:0001555,6.20e-08,116;UBERON:0007026,6.20e-08,116;UBERON:0009569,1.39e-07,66;UBERON:0001041,1.54e-07,80;UBERON:0004921,1.63e-07,114|phase1_expression=1.92178616525753,1.74487703819681,0.454999239389536,1.51232105653415,1.50268718983904,3.52546471014969,1.63528848416868,4.51931632045517,4.36445038670167,6.31974221069382,10.9579499664323,9.6524312384357,3.59521532855532,3.75907730401689,0.666219523631325,3.84703008040669,2.09868563438444,1.57731082679119,1.50825876966313,2.97072756258621,3.14660173558958,2.48227378002213,1.30599894569468,3.19984845586813,4.35877634027623,2.29692785646008,1.7230479846363,2.37018355954478,3.6104449696711,2.77233142735924,2.43903561720835,6.35030673459631,3.69038872550742,0,4.91047753577167,8.47796691328311,7.35009682544529,2.09265815368454,4.6880120671428,3.66466620781659,5.88231488031014,2.73218193983378,1.45653105909346,1.76255545165808,2.73717714292689,2.56965453026354,1.56478268869608,3.2703773457067,2.63623419281366,1.36100929351998,1.95980990275508,0,1.51004345451963,2.90144856804538,2.01656279485478,2.05807548828758,1.71920063963254,0,1.41621522601718,2.11596391708813,0,6.09920157724438,0.889294796111139,2.6996991518442,2.96659908770092,0.7104801149461,2.09720077362883,0.768436610643109,2.48855069540346,2.16009501330705,2.73422449756797,1.71390590642282,0.441737081903227,2.9397791811589,2.20444583341944,1.83843757322004,4.40463523997555,2.80912143787413,1.99688493233117,1.05509030184155,0.914876436024097,2.08365348222704,1.3959149950069,2.8138130501584,2.59757021220577,1.76777151284201,1.56608848879013,1.67759501242771,4.24066682665831,2.49386148352392,2.02905142091174,7.74381489283248,5.439770669662,5.39703191637817,6.49776417447669,6.72040330646003,4.0728881838208,4.60161870960756,2.59786004602869,1.41335829804136,1.40843419776681,2.56652954828636,0,0,1.94841936910093,0.506719730950197,2.52762222507392,3.4255163915718,2.07150306917737,6.67989625791711,5.20455980298408,6.69824052286711,7.14908041493781,6.0289056221049,3.76283862834255,8.29399502775858,1.73036477414062,2.60278842455841,3.5384422077995,2.58826959915855,2.65009822152472,1.93950101254089,1.86391761218122,4.09893115816166,4.39838084308256,3.0654846625031,2.87556298814209,1.19980546198682,2.79554499560742,2.39665023047716,1.83000241127451,2.51308704225729,2.25971616249959,1.53429274398198,2.28566849015516,1.78465389374533,2.74966282395854,1.24406970610093,0,2.94618598241064,1.95180664444056,2.75882525320168,1.62055916824814,1.80845781402858,1.42876648217788,2.3060469651273,2.43624483855295,2.58703370739016,2.80238390812695,1.13463648100692,1.75951124163949,2.19195732427575,2.50242524303038,1.74126083261083,2.05782136407943,1.9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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22247 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P13439 | |||
|association_with_transcript=0bp_to_ENSMUST00000023510_5end | |||
|cluster_id=chr16:33967118..33967129,- | |||
|description=CAGE_peak_2_at_Umps_5end | |||
|id=chr16:33967118..33967129,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000949!7.68e-14!72;UBERON:0004119!8.08e-13!130;UBERON:0000925!8.08e-13!130;UBERON:0006595!8.08e-13!130;UBERON:0000077!2.89e-12!97;UBERON:0001007!3.34e-12!128;UBERON:0001555!3.34e-12!128;UBERON:0007026!3.34e-12!128;UBERON:0001041!7.25e-12!92;UBERON:0004921!1.11e-11!126;UBERON:0004185!1.11e-11!126;UBERON:0003104!1.44e-11!131;UBERON:0009142!1.44e-11!131;UBERON:0005172!8.04e-11!49;UBERON:0005173!8.04e-11!49;UBERON:0002417!8.04e-11!49;UBERON:0000916!8.04e-11!49;UBERON:0002107!1.07e-09!22;UBERON:0007499!1.07e-09!22;UBERON:0006925!1.07e-09!22;UBERON:0009497!1.07e-09!22;UBERON:0000015!1.07e-09!22;UBERON:0002423!1.07e-09!22;UBERON:0006235!1.07e-09!22;UBERON:0008835!1.07e-09!22;UBERON:0003894!1.07e-09!22;UBERON:0004161!1.07e-09!22;UBERON:0008836!1.07e-09!22;UBERON:0005177!1.78e-09!85;UBERON:0002365!4.84e-09!25;UBERON:0002330!4.84e-09!25;UBERON:0002368!5.33e-09!60;UBERON:0009854!6.26e-09!23;UBERON:0009856!6.26e-09!23;UBERON:0005057!8.05e-09!51;UBERON:0002530!2.31e-08!65;UBERON:0002075!4.86e-08!19;UBERON:0009569!1.41e-07!66;UBERON:0002100!2.03e-07!98;UBERON:0000466!2.11e-07!79;UBERON:0005409!2.15e-07!59;UBERON:0005256!4.69e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000949,6.69e-14,72;UBERON:0005177,2.55e-12,79;UBERON:0005172,6.99e-11,49;UBERON:0005173,6.99e-11,49;UBERON:0002417,6.99e-11,49;UBERON:0000916,6.99e-11,49;UBERON:0002100,1.90e-10,90;UBERON:0002107,1.07e-09,22;UBERON:0007499,1.07e-09,22;UBERON:0006925,1.07e-09,22;UBERON:0009497,1.07e-09,22;UBERON:0000015,1.07e-09,22;UBERON:0002423,1.07e-09,22;UBERON:0006235,1.07e-09,22;UBERON:0008835,1.07e-09,22;UBERON:0003894,1.07e-09,22;UBERON:0004161,1.07e-09,22;UBERON:0008836,1.07e-09,22;UBERON:0002368,4.75e-09,60;UBERON:0002365,4.82e-09,25;UBERON:0002330,4.82e-09,25;UBERON:0009854,6.23e-09,23;UBERON:0009856,6.23e-09,23;UBERON:0004119,1.96e-08,118;UBERON:0000925,1.96e-08,118;UBERON:0006595,1.96e-08,118;UBERON:0002530,2.19e-08,65;UBERON:0005256,4.82e-08,45;UBERON:0002075,4.85e-08,19;UBERON:0001007,6.20e-08,116;UBERON:0001555,6.20e-08,116;UBERON:0007026,6.20e-08,116;UBERON:0009569,1.39e-07,66;UBERON:0001041,1.54e-07,80;UBERON:0004921,1.63e-07,114 | |||
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| |||
|short_description=p2@Umps | |||
}} |
Revision as of 08:32, 6 August 2015
Short description: | p2@Umps |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Umps_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000023510_5end |
EntrezGene: | 22247 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endocrine system | 6.69e-14 | 72 |
trunk region element | 2.55e-12 | 79 |
abdomen element | 6.99e-11 | 49 |
abdominal segment element | 6.99e-11 | 49 |
abdominal segment of trunk | 6.99e-11 | 49 |
abdomen | 6.99e-11 | 49 |
trunk | 1.90e-10 | 90 |
liver | 1.07e-09 | 22 |
epithelial sac | 1.07e-09 | 22 |
digestive gland | 1.07e-09 | 22 |
epithelium of foregut-midgut junction | 1.07e-09 | 22 |
anatomical boundary | 1.07e-09 | 22 |
hepatobiliary system | 1.07e-09 | 22 |
foregut-midgut junction | 1.07e-09 | 22 |
hepatic diverticulum | 1.07e-09 | 22 |
liver primordium | 1.07e-09 | 22 |
septum transversum | 1.07e-09 | 22 |
liver bud | 1.07e-09 | 22 |
endocrine gland | 4.75e-09 | 60 |
exocrine gland | 4.82e-09 | 25 |
exocrine system | 4.82e-09 | 25 |
digestive tract diverticulum | 6.23e-09 | 23 |
sac | 6.23e-09 | 23 |
endoderm-derived structure | 1.96e-08 | 118 |
endoderm | 1.96e-08 | 118 |
presumptive endoderm | 1.96e-08 | 118 |
gland | 2.19e-08 | 65 |
trunk mesenchyme | 4.82e-08 | 45 |
viscus | 4.85e-08 | 19 |
digestive system | 6.20e-08 | 116 |
digestive tract | 6.20e-08 | 116 |
primitive gut | 6.20e-08 | 116 |
subdivision of trunk | 1.39e-07 | 66 |
foregut | 1.54e-07 | 80 |
subdivision of digestive tract | 1.63e-07 | 114 |