FFCP PHASE1:Mm9::chr15:91991895..91991913,+: Difference between revisions
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{{FFCP|EntrezGene=12805|HGNC=|MCL_coexpression_id=237|UniProt=P12960|association_with_transcript=107bp_to_ENSMUST00000068378,NM_001159647,uc007xil.2_5end|description=CAGE_peak_13_at_Cntn1_5end|id=chr15:91991895..91991913,+|ontology_enrichment_celltype=CL:0000117!1.45e-13!23;CL:0000337!1.45e-13!23;CL:0000540!6.11e-08!33;CL:0000047!6.11e-08!33;CL:0000031!6.11e-08!33;CL:0000404!6.11e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.65e-12,23;CL:0000337,2.65e-12,23;CL:0002612,1.39e-10,3;CL:0002610,3.09e-10,3;CL:0000540,5.09e-08,33;CL:0000047,5.09e-08,33;CL:0000031,5.09e-08,33;CL:0000404,5.09e-08,33;CL:0002611,1.45e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!7.58e-25!52;UBERON:0005068!7.58e-25!52;UBERON:0006241!7.58e-25!52;UBERON:0007135!7.58e-25!52;UBERON:0001017!1.58e-23!73;UBERON:0005743!1.58e-23!73;UBERON:0000073!1.51e-22!75;UBERON:0001016!1.51e-22!75;UBERON:0000955!5.03e-22!50;UBERON:0006238!5.03e-22!50;UBERON:0002616!3.60e-21!49;UBERON:0002020!5.28e-20!34;UBERON:0000033!6.92e-19!63;UBERON:0002346!2.68e-17!71;UBERON:0003075!2.68e-17!71;UBERON:0007284!2.68e-17!71;UBERON:0004121!6.48e-16!102;UBERON:0000924!6.48e-16!102;UBERON:0006601!6.48e-16!102;UBERON:0003080!6.84e-15!40;UBERON:0002791!4.26e-14!29;UBERON:0003528!4.26e-14!29;UBERON:0001893!4.26e-14!29;UBERON:0002780!7.03e-14!39;UBERON:0001890!7.03e-14!39;UBERON:0006240!7.03e-14!39;UBERON:0003056!8.35e-13!49;UBERON:0003076!2.06e-11!12;UBERON:0003057!2.06e-11!12;UBERON:0007811!6.00e-11!86;UBERON:0000153!1.53e-10!94;UBERON:0002240!1.85e-09!6;UBERON:0005174!1.85e-09!6;UBERON:0001137!1.85e-09!6;UBERON:0002298!7.83e-09!6;UBERON:0002021!3.59e-08!10;UBERON:0000411!3.59e-08!10;UBERON:0001950!3.59e-08!10;UBERON:0000956!3.77e-08!21;UBERON:0001869!3.77e-08!21;UBERON:0000203!3.77e-08!21;UBERON:0001948!3.93e-08!5;UBERON:0002315!3.93e-08!5;UBERON:0002619!6.72e-08!17;UBERON:0002420!7.83e-08!8;UBERON:0007245!7.83e-08!8;UBERON:0010009!7.83e-08!8;UBERON:0010011!7.83e-08!8;UBERON:0000454!7.83e-08!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.04e-37,54;UBERON:0001049,3.73e-33,52;UBERON:0005068,3.73e-33,52;UBERON:0006241,3.73e-33,52;UBERON:0007135,3.73e-33,52;UBERON:0001017,4.45e-29,73;UBERON:0001016,3.57e-28,75;UBERON:0002346,4.64e-26,64;UBERON:0003075,4.64e-26,64;UBERON:0007284,4.64e-26,64;UBERON:0002020,8.22e-26,34;UBERON:0010371,2.90e-22,73;UBERON:0004121,3.29e-21,95;UBERON:0000924,3.29e-21,95;UBERON:0006601,3.29e-21,95;UBERON:0003076,6.65e-21,12;UBERON:0003057,6.65e-21,12;UBERON:0002616,2.61e-20,46;UBERON:0000955,8.53e-20,47;UBERON:0006238,8.53e-20,47;UBERON:0002240,1.58e-19,6;UBERON:0005174,1.58e-19,6;UBERON:0001137,1.58e-19,6;UBERON:0010314,1.11e-16,92;UBERON:0001948,1.65e-16,5;UBERON:0002315,1.65e-16,5;UBERON:0003080,3.33e-16,40;UBERON:0003528,5.71e-15,29;UBERON:0002791,5.71e-15,29;UBERON:0001893,5.71e-15,29;UBERON:0002780,1.80e-14,39;UBERON:0001890,1.80e-14,39;UBERON:0006240,1.80e-14,39;UBERON:0003056,1.25e-12,49;UBERON:0000025,1.58e-12,114;UBERON:0004111,2.20e-11,122;UBERON:0002257,1.39e-10,3;UBERON:0002021,1.93e-10,10;UBERON:0000411,1.93e-10,10;UBERON:0001950,1.93e-10,10;UBERON:0004684,3.09e-10,3;UBERON:0002275,3.09e-10,3;UBERON:0002619,3.61e-10,17;UBERON:0000956,4.84e-10,21;UBERON:0001869,4.84e-10,21;UBERON:0000203,4.84e-10,21;UBERON:0011216,9.08e-08,194;UBERON:0001896,1.00e-07,2;UBERON:0002298,1.00e-07,2;UBERON:0005290,1.00e-07,2;UBERON:0010096,1.00e-07,2;UBERON:0002256,1.45e-07,2;UBERON:0002950,1.58e-07,4;UBERON:0001891,1.58e-07,4;UBERON:0009616,1.58e-07,4;UBERON:0010286,1.58e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,4.57041575046086,2.20868540951614,0.489963196859816,0,0,1.10115880999389,3.19218345212969,3.37934373163736,0,0.548925861614458,0.52091337055676,1.3959149950069,0.56276261003168,2.59757021220577,5.89257170947335,6.54909731675874,1.3047961207771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,0.628340120440365,0,0,0,0,2.24685959107234,2.74500361691176,1.13088916901578,1.04294592115366,2.04572365864264,2.70124457927428,2.27137768294861,0.101839363850316,0,0,0,0,0,0,0,0,0.12811372028485,0.374806898238915,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72936002979246,3.98519734413491,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,0.920650473014354,1.71868654031819,2.40594455281163,0.685082519770642,1.5107877947794,1.35004500046361,0,0,1.03552062350364,0,0,0,0.486213434136588,0,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.320125762024346,0.229741875822453,0,0.115884325944855,0,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.145346416632329,0.188218760830661,0,0.182927972872773,0.526139422875686,0.814824683075171,0,0,0.197008964751127,0.818462086339379,0.464810523557898,0,0,0,0.214871054048298,0.382576664137687,0.220591419119515,0|short_description=p13@Cntn1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12805 | |||
|HGNC= | |||
|MCL_coexpression_id=237 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P12960 | |||
|association_with_transcript=107bp_to_ENSMUST00000068378,NM_001159647,uc007xil.2_5end | |||
|cluster_id=chr15:91991895..91991913,+ | |||
|description=CAGE_peak_13_at_Cntn1_5end | |||
|id=chr15:91991895..91991913,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.45e-13!23;CL:0000337!1.45e-13!23;CL:0000540!6.11e-08!33;CL:0000047!6.11e-08!33;CL:0000031!6.11e-08!33;CL:0000404!6.11e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.65e-12,23;CL:0000337,2.65e-12,23;CL:0002612,1.39e-10,3;CL:0002610,3.09e-10,3;CL:0000540,5.09e-08,33;CL:0000047,5.09e-08,33;CL:0000031,5.09e-08,33;CL:0000404,5.09e-08,33;CL:0002611,1.45e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.58e-25!52;UBERON:0005068!7.58e-25!52;UBERON:0006241!7.58e-25!52;UBERON:0007135!7.58e-25!52;UBERON:0001017!1.58e-23!73;UBERON:0005743!1.58e-23!73;UBERON:0000073!1.51e-22!75;UBERON:0001016!1.51e-22!75;UBERON:0000955!5.03e-22!50;UBERON:0006238!5.03e-22!50;UBERON:0002616!3.60e-21!49;UBERON:0002020!5.28e-20!34;UBERON:0000033!6.92e-19!63;UBERON:0002346!2.68e-17!71;UBERON:0003075!2.68e-17!71;UBERON:0007284!2.68e-17!71;UBERON:0004121!6.48e-16!102;UBERON:0000924!6.48e-16!102;UBERON:0006601!6.48e-16!102;UBERON:0003080!6.84e-15!40;UBERON:0002791!4.26e-14!29;UBERON:0003528!4.26e-14!29;UBERON:0001893!4.26e-14!29;UBERON:0002780!7.03e-14!39;UBERON:0001890!7.03e-14!39;UBERON:0006240!7.03e-14!39;UBERON:0003056!8.35e-13!49;UBERON:0003076!2.06e-11!12;UBERON:0003057!2.06e-11!12;UBERON:0007811!6.00e-11!86;UBERON:0000153!1.53e-10!94;UBERON:0002240!1.85e-09!6;UBERON:0005174!1.85e-09!6;UBERON:0001137!1.85e-09!6;UBERON:0002298!7.83e-09!6;UBERON:0002021!3.59e-08!10;UBERON:0000411!3.59e-08!10;UBERON:0001950!3.59e-08!10;UBERON:0000956!3.77e-08!21;UBERON:0001869!3.77e-08!21;UBERON:0000203!3.77e-08!21;UBERON:0001948!3.93e-08!5;UBERON:0002315!3.93e-08!5;UBERON:0002619!6.72e-08!17;UBERON:0002420!7.83e-08!8;UBERON:0007245!7.83e-08!8;UBERON:0010009!7.83e-08!8;UBERON:0010011!7.83e-08!8;UBERON:0000454!7.83e-08!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.04e-37,54;UBERON:0001049,3.73e-33,52;UBERON:0005068,3.73e-33,52;UBERON:0006241,3.73e-33,52;UBERON:0007135,3.73e-33,52;UBERON:0001017,4.45e-29,73;UBERON:0001016,3.57e-28,75;UBERON:0002346,4.64e-26,64;UBERON:0003075,4.64e-26,64;UBERON:0007284,4.64e-26,64;UBERON:0002020,8.22e-26,34;UBERON:0010371,2.90e-22,73;UBERON:0004121,3.29e-21,95;UBERON:0000924,3.29e-21,95;UBERON:0006601,3.29e-21,95;UBERON:0003076,6.65e-21,12;UBERON:0003057,6.65e-21,12;UBERON:0002616,2.61e-20,46;UBERON:0000955,8.53e-20,47;UBERON:0006238,8.53e-20,47;UBERON:0002240,1.58e-19,6;UBERON:0005174,1.58e-19,6;UBERON:0001137,1.58e-19,6;UBERON:0010314,1.11e-16,92;UBERON:0001948,1.65e-16,5;UBERON:0002315,1.65e-16,5;UBERON:0003080,3.33e-16,40;UBERON:0003528,5.71e-15,29;UBERON:0002791,5.71e-15,29;UBERON:0001893,5.71e-15,29;UBERON:0002780,1.80e-14,39;UBERON:0001890,1.80e-14,39;UBERON:0006240,1.80e-14,39;UBERON:0003056,1.25e-12,49;UBERON:0000025,1.58e-12,114;UBERON:0004111,2.20e-11,122;UBERON:0002257,1.39e-10,3;UBERON:0002021,1.93e-10,10;UBERON:0000411,1.93e-10,10;UBERON:0001950,1.93e-10,10;UBERON:0004684,3.09e-10,3;UBERON:0002275,3.09e-10,3;UBERON:0002619,3.61e-10,17;UBERON:0000956,4.84e-10,21;UBERON:0001869,4.84e-10,21;UBERON:0000203,4.84e-10,21;UBERON:0011216,9.08e-08,194;UBERON:0001896,1.00e-07,2;UBERON:0002298,1.00e-07,2;UBERON:0005290,1.00e-07,2;UBERON:0010096,1.00e-07,2;UBERON:0002256,1.45e-07,2;UBERON:0002950,1.58e-07,4;UBERON:0001891,1.58e-07,4;UBERON:0009616,1.58e-07,4;UBERON:0010286,1.58e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,4.57041575046086,2.20868540951614,0.489963196859816,0,0,1.10115880999389,3.19218345212969,3.37934373163736,0,0.548925861614458,0.52091337055676,1.3959149950069,0.56276261003168,2.59757021220577,5.89257170947335,6.54909731675874,1.3047961207771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,0.628340120440365,0,0,0,0,2.24685959107234,2.74500361691176,1.13088916901578,1.04294592115366,2.04572365864264,2.70124457927428,2.27137768294861,0.101839363850316,0,0,0,0,0,0,0,0,0.12811372028485,0.374806898238915,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72936002979246,3.98519734413491,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,0.920650473014354,1.71868654031819,2.40594455281163,0.685082519770642,1.5107877947794,1.35004500046361,0,0,1.03552062350364,0,0,0,0.486213434136588,0,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.320125762024346,0.229741875822453,0,0.115884325944855,0,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.145346416632329,0.188218760830661,0,0.182927972872773,0.526139422875686,0.814824683075171,0,0,0.197008964751127,0.818462086339379,0.464810523557898,0,0,0,0.214871054048298,0.382576664137687,0.220591419119515,0 | |||
|short_description=p13@Cntn1 | |||
}} |
Revision as of 21:01, 5 August 2015
Short description: | p13@Cntn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Cntn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:237 |
Association with transcript: | 107bp_to_ENSMUST00000068378, NM_001159647, uc007xil.2_5end |
EntrezGene: | 12805 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.65e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.65e-12 | 23 |
neuron of the ventral spinal cord | 1.39e-10 | 3 |
raphe nuclei neuron | 3.09e-10 | 3 |
neuron | 5.09e-08 | 33 |
neuronal stem cell | 5.09e-08 | 33 |
neuroblast | 5.09e-08 | 33 |
electrically signaling cell | 5.09e-08 | 33 |
neuron of the dorsal spinal cord | 1.45e-07 | 2 |