FFCP PHASE1:Hg19::chr4:66536407..66536419,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2044 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3389 | |||
|TSSclassifier=weak | |||
|UniProt=F8VP57 | |||
|association_with_transcript=-194bp_to_ENST00000511294_5end | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_9_at_EPHA5_5end | |||
|id=chr4:66536407..66536419,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000138;7.17e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,7.17e-07,6;CL:0000138,7.17e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:201!4.18e-08!6;DOID:0060100!4.18e-08!6 | |||
|ontology_enrichment_disease_v019=DOID:3371;1.84e-34;1!DOID:4549;1.84e-34;1!DOID:5861;1.84e-34;1!DOID:6496;1.84e-34;1!DOID:201;7.17e-07;6!DOID:0060100;7.17e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.84e-34,1;DOID:4549,1.84e-34,1;DOID:5861,1.84e-34,1;DOID:6496,1.84e-34,1;DOID:201,7.17e-07,6;DOID:0060100,7.17e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.98e-41!57;UBERON:0005068!1.98e-41!57;UBERON:0006241!1.98e-41!57;UBERON:0007135!1.98e-41!57;UBERON:0001017!1.09e-33!82;UBERON:0005743!1.42e-33!86;UBERON:0002616!9.60e-32!59;UBERON:0002346!3.10e-30!90;UBERON:0003075!3.36e-30!86;UBERON:0007284!3.36e-30!86;UBERON:0000955!1.17e-29!69;UBERON:0006238!1.17e-29!69;UBERON:0000073!1.77e-29!94;UBERON:0001016!1.77e-29!94;UBERON:0002780!8.02e-25!41;UBERON:0001890!8.02e-25!41;UBERON:0006240!8.02e-25!41;UBERON:0003080!4.21e-24!42;UBERON:0007023!1.65e-22!115;UBERON:0001893!5.53e-22!34;UBERON:0002020!5.83e-22!34;UBERON:0003528!5.83e-22!34;UBERON:0001950!2.42e-21!20;UBERON:0002791!2.52e-20!33;UBERON:0003076!1.16e-19!15;UBERON:0003057!1.16e-19!15;UBERON:0002619!3.54e-19!22;UBERON:0001869!1.32e-18!32;UBERON:0000956!1.47e-16!25;UBERON:0000203!1.47e-16!25;UBERON:0003056!2.23e-16!61;UBERON:0000924!1.13e-15!173;UBERON:0006601!1.13e-15!173;UBERON:0004121!2.68e-15!169;UBERON:0000033!2.69e-15!123;UBERON:0000153!3.42e-14!129;UBERON:0007811!3.42e-14!129;UBERON:0004733!5.89e-13!12;UBERON:0002028!5.89e-13!12;UBERON:0007277!5.89e-13!12;UBERON:0000025!2.69e-12!194;UBERON:0004732!7.57e-12!13;UBERON:0002298!2.58e-11!8;UBERON:0000200!2.28e-10!6;UBERON:0002680!4.77e-10!9;UBERON:0001895!4.77e-10!9;UBERON:0010092!4.77e-10!9;UBERON:0002240!2.68e-09!3;UBERON:0004111!2.93e-09!241;UBERON:0001872!1.03e-08!5;UBERON:0000483!2.56e-08!309;UBERON:0000988!2.93e-08!3;UBERON:0001871!3.46e-08!7;UBERON:0006331!3.51e-08!3;UBERON:0002771!3.69e-08!3;UBERON:0000119!3.94e-08!312;UBERON:0000477!6.79e-08!286;UBERON:0003296!2.04e-07!4;UBERON:0010133!2.04e-07!4;UBERON:0001905!3.36e-07!2;UBERON:0002757!3.36e-07!2;UBERON:0010134!3.36e-07!2;UBERON:0002784!3.36e-07!2;UBERON:0005408!3.36e-07!2;UBERON:0001899!3.36e-07!2;UBERON:0002308!7.50e-07!9;UBERON:0000125!7.50e-07!9;UBERON:0000475!8.69e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.40e-66;2!UBERON:0002757;2.40e-66;2!UBERON:0010134;2.40e-66;2!UBERON:0005408;2.40e-66;2!UBERON:0001899;2.40e-66;2!UBERON:0003296;7.69e-34;4!UBERON:0010133;7.69e-34;4!UBERON:0002784;7.69e-34;4!UBERON:0001894;7.47e-20;7!UBERON:0002418;1.85e-12;3!UBERON:0004755;1.85e-12;3!UBERON:0002369;2.74e-12;3!UBERON:0001235;2.74e-12;3!UBERON:0006858;2.74e-12;3!UBERON:0002780;2.48e-10;41!UBERON:0001890;2.48e-10;41!UBERON:0002368;1.55e-08;33!UBERON:0000949;3.18e-08;43!UBERON:0002021;6.78e-08;5!UBERON:0001950;2.95e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.45e-66,2;UBERON:0002757,1.45e-66,2;UBERON:0010134,1.45e-66,2;UBERON:0005408,1.45e-66,2;UBERON:0001899,1.45e-66,2;UBERON:0003296,5.98e-34,4;UBERON:0010133,5.98e-34,4;UBERON:0002784,5.98e-34,4;UBERON:0001894,6.48e-20,7;UBERON:0006222,6.48e-20,7;UBERON:0002780,4.01e-13,41;UBERON:0001890,4.01e-13,41;UBERON:0003080,4.01e-13,41;UBERON:0006240,4.01e-13,41;UBERON:0002418,1.85e-12,3;UBERON:0004755,1.85e-12,3;UBERON:0002369,2.59e-12,3;UBERON:0001235,2.59e-12,3;UBERON:0006858,2.59e-12,3;UBERON:0000073,2.46e-10,53;UBERON:0002616,2.46e-10,53;UBERON:0001049,8.06e-10,56;UBERON:0005068,8.06e-10,56;UBERON:0006241,8.06e-10,56;UBERON:0007135,8.06e-10,56;UBERON:0002368,2.89e-09,35;UBERON:0003056,4.53e-09,61;UBERON:0000955,4.31e-08,68;UBERON:0006238,4.31e-08,68;UBERON:0002021,7.49e-08,5;UBERON:0000949,2.33e-07,45;UBERON:0001950,3.14e-07,20;UBERON:0001017,6.74e-07,81;UBERON:0003075,6.74e-07,82;UBERON:0007284,6.74e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0.662045904066094,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.54941678891006,0.907604499126468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.94443704049192,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57768678274367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0.331737779793674,0.295547618953547,0.438770794307945,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,1.22429104652196,0,0,0.311064574191741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.296784216512,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0.082092520749339,0.511164065356265,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0.221858103073705,0.434674820589684,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.736423801007363,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.256916900385838,0,0.319267718114302,0,1.00828678488687,0.345786262321089,0.322951291263702,0,0,0,0,0,0.381382095467167,0.690359926060101,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.19024743058172,0.546974809018219,0,0,0,0,1.60710550763486,2.01770233331294,0.606965604236632,0,0,0,0,0.339848664884159,0.197318320688547,0,0.111231401892069,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0.594092800654172,0.4226557275834,0.169927114687817,0,0.128915775947154,0,0,0,0,0,0,0.286679166302903,0,0.407948941145488,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@EPHA5 | |||
}} |
Revision as of 01:15, 22 January 2014
Short description: | p9@EPHA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_EPHA5_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -194bp_to_ENST00000511294_5end |
EntrezGene: | EPHA5 |
HGNC: | 3389 |
UniProt: | F8VP57 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 7.17e-07 | 6 |
chondrocyte | 7.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.45e-66 | 2 |
regional part of epithalamus | 1.45e-66 | 2 |
secretory circumventricular organ | 1.45e-66 | 2 |
circumventricular organ | 1.45e-66 | 2 |
epithalamus | 1.45e-66 | 2 |
gland of diencephalon | 5.98e-34 | 4 |
neuroendocrine gland | 5.98e-34 | 4 |
regional part of diencephalon | 5.98e-34 | 4 |
diencephalon | 6.48e-20 | 7 |
future diencephalon | 6.48e-20 | 7 |
regional part of forebrain | 4.01e-13 | 41 |
forebrain | 4.01e-13 | 41 |
anterior neural tube | 4.01e-13 | 41 |
future forebrain | 4.01e-13 | 41 |
cartilage tissue | 1.85e-12 | 3 |
skeletal tissue | 1.85e-12 | 3 |
adrenal gland | 2.59e-12 | 3 |
adrenal cortex | 2.59e-12 | 3 |
adrenal/interrenal gland | 2.59e-12 | 3 |
regional part of nervous system | 2.46e-10 | 53 |
regional part of brain | 2.46e-10 | 53 |
neural tube | 8.06e-10 | 56 |
neural rod | 8.06e-10 | 56 |
future spinal cord | 8.06e-10 | 56 |
neural keel | 8.06e-10 | 56 |
endocrine gland | 2.89e-09 | 35 |
pre-chordal neural plate | 4.53e-09 | 61 |
brain | 4.31e-08 | 68 |
future brain | 4.31e-08 | 68 |
occipital lobe | 7.49e-08 | 5 |
endocrine system | 2.33e-07 | 45 |
neocortex | 3.14e-07 | 20 |
central nervous system | 6.74e-07 | 81 |
neural plate | 6.74e-07 | 82 |
presumptive neural plate | 6.74e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.84e-34 | 1 |
extraosseous chondrosarcoma | 1.84e-34 | 1 |
myxoid chondrosarcoma | 1.84e-34 | 1 |
extraskeletal myxoid chondrosarcoma | 1.84e-34 | 1 |
connective tissue cancer | 7.17e-07 | 6 |
musculoskeletal system cancer | 7.17e-07 | 6 |