FFCP PHASE1:Hg19::chr4:62067884..62067900,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23284 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20974 | |||
|TSSclassifier=strong | |||
|UniProt=E9PE04 | |||
|association_with_transcript=24bp_to_ENST00000514591_5end | |||
|coexpression_cluster_id=C1126 | |||
|description=CAGE_peak_6_at_LPHN3_5end | |||
|id=chr4:62067884..62067900,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.49e-25;3!UBERON:0005425;2.25e-19;1!UBERON:0003056;2.47e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.10e-61!115;UBERON:0001049!1.15e-54!57;UBERON:0005068!1.15e-54!57;UBERON:0006241!1.15e-54!57;UBERON:0007135!1.15e-54!57;UBERON:0001017!7.94e-48!82;UBERON:0005743!1.99e-47!86;UBERON:0000955!2.11e-47!69;UBERON:0006238!2.11e-47!69;UBERON:0000073!1.96e-46!94;UBERON:0001016!1.96e-46!94;UBERON:0002616!3.66e-46!59;UBERON:0003075!3.34e-43!86;UBERON:0007284!3.34e-43!86;UBERON:0002346!8.97e-41!90;UBERON:0002780!3.05e-39!41;UBERON:0001890!3.05e-39!41;UBERON:0006240!3.05e-39!41;UBERON:0003080!3.85e-38!42;UBERON:0002020!6.28e-38!34;UBERON:0003528!6.28e-38!34;UBERON:0001893!7.21e-38!34;UBERON:0002791!9.45e-36!33;UBERON:0001869!1.82e-33!32;UBERON:0000153!1.47e-30!129;UBERON:0007811!1.47e-30!129;UBERON:0003056!3.77e-30!61;UBERON:0000033!1.79e-29!123;UBERON:0002619!6.19e-26!22;UBERON:0004121!3.14e-24!169;UBERON:0000924!2.22e-23!173;UBERON:0006601!2.22e-23!173;UBERON:0000956!1.98e-22!25;UBERON:0000203!1.98e-22!25;UBERON:0001950!1.14e-21!20;UBERON:0002308!3.19e-18!9;UBERON:0000125!3.19e-18!9;UBERON:0002420!5.77e-18!9;UBERON:0007245!5.77e-18!9;UBERON:0010009!5.77e-18!9;UBERON:0010011!5.77e-18!9;UBERON:0000454!5.77e-18!9;UBERON:0003076!3.42e-17!15;UBERON:0003057!3.42e-17!15;UBERON:0004732!2.16e-16!13;UBERON:0000200!8.02e-16!6;UBERON:0004733!4.44e-14!12;UBERON:0002028!4.44e-14!12;UBERON:0007277!4.44e-14!12;UBERON:0009663!1.60e-13!7;UBERON:0000349!2.17e-13!5;UBERON:0002298!2.69e-12!8;UBERON:0000025!4.14e-12!194;UBERON:0001871!1.79e-11!7;UBERON:0002680!5.28e-11!9;UBERON:0001895!5.28e-11!9;UBERON:0010092!5.28e-11!9;UBERON:0000064!2.29e-09!219;UBERON:0000988!4.11e-09!3;UBERON:0006331!4.70e-09!3;UBERON:0002771!1.01e-08!3;UBERON:0004111!2.20e-08!241;UBERON:0000483!2.28e-08!309;UBERON:0000475!2.30e-08!365;UBERON:0000119!3.54e-08!312;UBERON:0000477!4.12e-08!286;UBERON:0000062!7.67e-08!511;UBERON:0001875!9.01e-07!2;UBERON:0006514!9.01e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004732;1.20e-34;13!UBERON:0004733;2.31e-24;12!UBERON:0002028;2.31e-24;12!UBERON:0002022;2.25e-19;1!UBERON:0002038;2.25e-19;1!UBERON:0000941;2.25e-19;1!UBERON:0001785;2.25e-19;1!UBERON:0002464;2.25e-19;1!UBERON:0004904;2.25e-19;1!UBERON:0001021;2.25e-19;1!UBERON:0009661;2.25e-19;1!UBERON:0002950;2.25e-19;1!UBERON:0001891;2.25e-19;1!UBERON:0002680;1.10e-18;9!UBERON:0001895;1.10e-18;9!UBERON:0000073;8.67e-15;53!UBERON:0002616;8.67e-15;53!UBERON:0002037;5.10e-13;6!UBERON:0002298;5.10e-13;6!UBERON:0009663;2.68e-11;7!UBERON:0001897;2.27e-10;2!UBERON:0003714;2.27e-10;2!UBERON:0001875;2.27e-10;2!UBERON:0005162;2.27e-10;2!UBERON:0000122;2.27e-10;2!UBERON:0006514;2.27e-10;2!UBERON:0010225;2.27e-10;2!UBERON:0000955;2.02e-09;68!UBERON:0002420;5.41e-09;9!UBERON:0000125;5.41e-09;9!UBERON:0007245;5.41e-09;9!UBERON:0002308;5.41e-09;9!UBERON:0010009;5.41e-09;9!UBERON:0010011;5.41e-09;9!UBERON:0000454;5.41e-09;9!UBERON:0001016;5.99e-09;83!UBERON:0000988;2.47e-07;3!UBERON:0001896;2.47e-07;3!UBERON:0005290;2.47e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004732,6.88e-35,13;UBERON:0004733,1.61e-24,12;UBERON:0002028,1.61e-24,12;UBERON:0007277,1.61e-24,12;UBERON:0000073,6.64e-21,53;UBERON:0002616,6.64e-21,53;UBERON:0001049,8.74e-20,56;UBERON:0005068,8.74e-20,56;UBERON:0006241,8.74e-20,56;UBERON:0007135,8.74e-20,56;UBERON:0003076,1.04e-19,15;UBERON:0003057,1.04e-19,15;UBERON:0000941,1.56e-19,1;UBERON:0001785,1.56e-19,1;UBERON:0002464,1.56e-19,1;UBERON:0004904,1.56e-19,1;UBERON:0001021,1.56e-19,1;UBERON:0003902,1.56e-19,1;UBERON:0005425,1.56e-19,1;UBERON:0002022,4.69e-19,1;UBERON:0002038,5.62e-19,1;UBERON:0009661,5.62e-19,1;UBERON:0002950,5.62e-19,1;UBERON:0001891,5.62e-19,1;UBERON:0009616,5.62e-19,1;UBERON:0010286,5.62e-19,1;UBERON:0002680,6.80e-19,9;UBERON:0001895,6.80e-19,9;UBERON:0010092,6.80e-19,9;UBERON:0003075,4.67e-17,82;UBERON:0007284,4.67e-17,82;UBERON:0002346,3.00e-16,86;UBERON:0000955,4.87e-16,68;UBERON:0006238,4.87e-16,68;UBERON:0001016,2.45e-15,89;UBERON:0001017,1.85e-13,81;UBERON:0010371,2.27e-13,104;UBERON:0002037,3.14e-13,6;UBERON:0006215,3.14e-13,6;UBERON:0002298,5.76e-13,6;UBERON:0007023,2.87e-12,114;UBERON:0009663,3.66e-11,7;UBERON:0001897,1.57e-10,2;UBERON:0010225,1.57e-10,2;UBERON:0003714,1.89e-10,2;UBERON:0005162,1.89e-10,2;UBERON:0000122,1.89e-10,2;UBERON:0010314,1.99e-10,132;UBERON:0001875,2.49e-10,2;UBERON:0006514,2.49e-10,2;UBERON:0002420,6.88e-09,9;UBERON:0000125,6.88e-09,9;UBERON:0007245,6.88e-09,9;UBERON:0002308,6.88e-09,9;UBERON:0010009,6.88e-09,9;UBERON:0010011,6.88e-09,9;UBERON:0000454,6.88e-09,9;UBERON:0004121,8.24e-08,171;UBERON:0000924,8.24e-08,171;UBERON:0006601,8.24e-08,171;UBERON:0000988,2.47e-07,3;UBERON:0003056,2.49e-07,61;UBERON:0001896,2.79e-07,3;UBERON:0005290,2.79e-07,3;UBERON:0010096,2.79e-07,3;UBERON:0002780,3.65e-07,41;UBERON:0001890,3.65e-07,41;UBERON:0003080,3.65e-07,41;UBERON:0006240,3.65e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0.321176150207399,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0.969332746095218,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,1.52581736317083,1.76926815889959,0.886642856860642,0.219385397153973,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.759729551470544,0,0,0,0,0.144090417154106,0,1.37275998289572,0,0,0,0,0,0,0,1.20084057741958,0.821432273351958,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0,0,0,0,0,1.03274246318642,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.66116300871345,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0.366078794705889,0.751145584238999,0,0.665574309221114,1.17983165588629,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,0,0.478901577171454,0,0,0.414943514785307,0.484426936895553,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,0,0.206686796501184,0.697573912132975,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,1.22345519358297,0.460409414939944,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0.981542335574726,0.891139200981258,0,0,0,0.128915775947154,0,0,0,0,0.730336388246517,0,1.00337708206016,0,0.543931921527318,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,1.65833887891756,0.20686599172379,0.213233981900981,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p6@LPHN3 | |||
}} |
Revision as of 01:13, 22 January 2014
Short description: | p6@LPHN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LPHN3_5end |
Coexpression cluster: | C1126_thalamus_cerebellum_amygdala_locus_pons_spinal_medulla |
Association with transcript: | 24bp_to_ENST00000514591_5end |
EntrezGene: | LPHN3 |
HGNC: | 20974 |
UniProt: | E9PE04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data