FFCP PHASE1:Hg19::chr4:174320254..174320274,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11341 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17036 | |||
|TSSclassifier=not | |||
|UniProt=O75711,Q6FGG5 | |||
|association_with_transcript=342bp_to_NM_007281,uc003ite.2_5end | |||
|coexpression_cluster_id=C243 | |||
|description=CAGE_peak_2_at_SCRG1_5end | |||
|id=chr4:174320254..174320274,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000153;6.47e-08;9!CL:0000447;6.47e-08;9!CL:0000138;5.65e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,6.37e-08,9;CL:0000447,6.37e-08,9;CL:0000058,5.55e-07,6;CL:0000138,5.55e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.08e-17;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.30e-56!115;UBERON:0001049!1.41e-52!57;UBERON:0005068!1.41e-52!57;UBERON:0006241!1.41e-52!57;UBERON:0007135!1.41e-52!57;UBERON:0001017!1.03e-45!82;UBERON:0005743!8.37e-44!86;UBERON:0002616!5.87e-43!59;UBERON:0000073!1.90e-41!94;UBERON:0001016!1.90e-41!94;UBERON:0002780!1.45e-40!41;UBERON:0001890!1.45e-40!41;UBERON:0006240!1.45e-40!41;UBERON:0003080!3.29e-39!42;UBERON:0003075!8.03e-39!86;UBERON:0007284!8.03e-39!86;UBERON:0000955!2.16e-38!69;UBERON:0006238!2.16e-38!69;UBERON:0002346!5.24e-36!90;UBERON:0002020!4.23e-34!34;UBERON:0003528!4.23e-34!34;UBERON:0001893!7.27e-34!34;UBERON:0002791!7.44e-33!33;UBERON:0001869!1.23e-31!32;UBERON:0003056!3.18e-25!61;UBERON:0000956!3.60e-24!25;UBERON:0000203!3.60e-24!25;UBERON:0004121!1.69e-22!169;UBERON:0002619!6.42e-22!22;UBERON:0000033!1.00e-21!123;UBERON:0000153!1.98e-21!129;UBERON:0007811!1.98e-21!129;UBERON:0000924!2.37e-21!173;UBERON:0006601!2.37e-21!173;UBERON:0001950!1.24e-19!20;UBERON:0000025!1.78e-14!194;UBERON:0003076!5.09e-14!15;UBERON:0003057!5.09e-14!15;UBERON:0004111!1.71e-13!241;UBERON:0004732!1.10e-11!13;UBERON:0002308!2.28e-11!9;UBERON:0000125!2.28e-11!9;UBERON:0000475!2.64e-11!365;UBERON:0002420!2.71e-11!9;UBERON:0007245!2.71e-11!9;UBERON:0010009!2.71e-11!9;UBERON:0010011!2.71e-11!9;UBERON:0000454!2.71e-11!9;UBERON:0004733!1.29e-10!12;UBERON:0002028!1.29e-10!12;UBERON:0007277!1.29e-10!12;UBERON:0000477!8.48e-10!286;UBERON:0009663!4.02e-09!7;UBERON:0000064!2.81e-08!219;UBERON:0000468!4.83e-08!659;UBERON:0001894!5.24e-08!7;UBERON:0006222!5.24e-08!7;UBERON:0002298!6.39e-08!8;UBERON:0000200!1.05e-07!6;UBERON:0002680!1.88e-07!9;UBERON:0001895!1.88e-07!9;UBERON:0010092!1.88e-07!9;UBERON:0001871!2.58e-07!7;UBERON:0000349!4.48e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.22e-40;34!UBERON:0003528;3.67e-40;34!UBERON:0002020;3.67e-40;34!UBERON:0002780;6.68e-40;41!UBERON:0001890;6.68e-40;41!UBERON:0002791;1.33e-39;32!UBERON:0001869;2.02e-39;32!UBERON:0000073;6.01e-39;53!UBERON:0002616;6.01e-39;53!UBERON:0000956;3.00e-33;25!UBERON:0000203;3.00e-33;25!UBERON:0002619;3.74e-30;22!UBERON:0001950;5.73e-27;20!UBERON:0000955;1.51e-25;68!UBERON:0001017;1.17e-24;75!UBERON:0001016;1.91e-22;83!UBERON:0007023;1.89e-16;114!UBERON:0000125;3.47e-15;9!UBERON:0002308;3.47e-15;9!UBERON:0002420;4.45e-15;9!UBERON:0007245;4.45e-15;9!UBERON:0010009;4.45e-15;9!UBERON:0010011;4.45e-15;9!UBERON:0000454;4.45e-15;9!UBERON:0004732;4.70e-14;13!UBERON:0004733;1.34e-12;12!UBERON:0002028;1.34e-12;12!UBERON:0009663;4.60e-12;7!UBERON:0002298;8.21e-11;6!UBERON:0001894;1.76e-10;7!UBERON:0000200;4.23e-10;6!UBERON:0000349;3.15e-09;5!UBERON:0004457;6.14e-09;9!UBERON:0000042;6.14e-09;9!UBERON:0001871;2.08e-08;6!UBERON:0002680;2.49e-08;9!UBERON:0001895;2.49e-08;9!UBERON:0002021;3.73e-08;5!UBERON:0003688;3.80e-08;6!UBERON:0002358;3.80e-08;6!UBERON:0003684;3.80e-08;6!UBERON:0001178;3.80e-08;6!UBERON:0001872;3.94e-08;5!UBERON:0011216;9.16e-08;132!UBERON:0000369;2.21e-07;4!UBERON:0002435;2.21e-07;4!UBERON:0000204;2.21e-07;4!UBERON:0002784;6.82e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.20e-73,56;UBERON:0005068,6.20e-73,56;UBERON:0006241,6.20e-73,56;UBERON:0007135,6.20e-73,56;UBERON:0000073,9.11e-68,53;UBERON:0002616,9.11e-68,53;UBERON:0001017,3.37e-66,81;UBERON:0001016,8.56e-62,89;UBERON:0007023,1.10e-56,114;UBERON:0002780,3.89e-56,41;UBERON:0001890,3.89e-56,41;UBERON:0003080,3.89e-56,41;UBERON:0006240,3.89e-56,41;UBERON:0000955,2.30e-55,68;UBERON:0006238,2.30e-55,68;UBERON:0003075,1.22e-51,82;UBERON:0007284,1.22e-51,82;UBERON:0002346,2.42e-48,86;UBERON:0003528,4.11e-47,34;UBERON:0002020,4.11e-47,34;UBERON:0001893,8.75e-47,34;UBERON:0002791,6.78e-44,32;UBERON:0001869,1.13e-43,32;UBERON:0010371,1.17e-39,104;UBERON:0003056,2.01e-35,61;UBERON:0010314,2.65e-35,132;UBERON:0000956,2.98e-33,25;UBERON:0000203,2.98e-33,25;UBERON:0004121,3.13e-31,171;UBERON:0000924,3.13e-31,171;UBERON:0006601,3.13e-31,171;UBERON:0002619,4.08e-30,22;UBERON:0001950,6.28e-27,20;UBERON:0011216,6.48e-22,223;UBERON:0000025,2.04e-18,192;UBERON:0003076,3.41e-17,15;UBERON:0003057,3.41e-17,15;UBERON:0004111,1.02e-15,240;UBERON:0000125,3.47e-15,9;UBERON:0002308,3.47e-15,9;UBERON:0002420,4.42e-15,9;UBERON:0007245,4.42e-15,9;UBERON:0010009,4.42e-15,9;UBERON:0010011,4.42e-15,9;UBERON:0000454,4.42e-15,9;UBERON:0004732,5.22e-14,13;UBERON:0004733,1.49e-12,12;UBERON:0002028,1.49e-12,12;UBERON:0007277,1.49e-12,12;UBERON:0009663,4.58e-12,7;UBERON:0002298,8.36e-11,6;UBERON:0001894,1.61e-10,7;UBERON:0006222,1.61e-10,7;UBERON:0000200,4.21e-10,6;UBERON:0000349,3.13e-09,5;UBERON:0000483,1.90e-08,306;UBERON:0001871,2.12e-08,6;UBERON:0002680,2.73e-08,9;UBERON:0001895,2.73e-08,9;UBERON:0010092,2.73e-08,9;UBERON:0000119,3.42e-08,309;UBERON:0002021,3.88e-08,5;UBERON:0001872,4.12e-08,5;UBERON:0003688,5.30e-08,6;UBERON:0002358,5.30e-08,6;UBERON:0003684,5.30e-08,6;UBERON:0001178,5.30e-08,6;UBERON:0000369,2.19e-07,4;UBERON:0002435,2.19e-07,4;UBERON:0000204,2.19e-07,4;UBERON:0010082,2.19e-07,4;UBERON:0000923,4.80e-07,560;UBERON:0010316,4.80e-07,560;UBERON:0005291,4.80e-07,560;UBERON:0006598,4.80e-07,560;UBERON:0010317,4.80e-07,560;UBERON:0002532,4.80e-07,560;UBERON:0002784,6.47e-07,4;UBERON:0002050,8.30e-07,564 | |||
|phase1_expression=4.1786027232228,0.856402095563933,10.2896714990059,2.00146596706261,12.5149106439641,10.4680622892044,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,2.19418305034661,10.8769675109802,1.50561867580173,3.64073654824928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,3.58015173161885,13.373248638229,6.51739283826656,12.6016471495917,66.0087336052412,506.586899985044,0,0,0.087834785693126,14.4731878424972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.46063537203914,0.506522046658319,0,2.58152958673932,0,1.12135520028461,0,0,0.311211035399766,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.226864366320042,0,0.213557388818567,0,0,0,0.257640540045629,0.744467425326359,0.675105328965065,2.53336213419116,0.252433774244115,0.276149695926898,0,0,0.201504196455281,0,0,0,0,0.121973706129595,0,0.232387885739037,1.24393266018445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23392991243988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,8.86611965318856,6.89171615004683,0,0.434343920002738,0,0,0,0,0,0,33.2863957731427,10.4111883086097,9.27946575333234,11.3911060427357,13.3967137847164,0,0,0,0,0.500170521059677,0,0,0,0,0.702848489956279,0.300946099727719,2.27407504055985,4.1389228517002,0,0.184369168541703,0,0,0,0,0,0,0,0,0.907170879989041,5.95458738765064,3.83654933220156,2.52594084989766,7.30393150757495,2.04682899626681,3.21707842287215,0,0,0.532685175939381,0.246381468041427,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.773365746336976,0,0,0,0,0,0.255679882248303,4.36256974669013,0,0,0,0,0.929691098594572,2.20368642781448,0,0,0,0,0,0.572499546967965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.818999468447914,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0.392996164052485,0,0,17.3108260944085,1.31717957183961,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.7366441494834,50.3596510749636,0,0,0,3.38721580026819,0.552567831062295,0,0,0,0.311039587661807,0,0,0,1.87422470710174,0,0,43.6199735742848,56.3102355842437,15.9691038400955,0,0,0,0,0,0,0,0,0.173624994933292,40.7441037474366,41.7263677643911,18.30980835805,20.7889008670702,27.4859285626799,43.6576940336405,0,0,0.692552326534174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.76915129006678,0.611030144933625,0,0,0,37.3402276712951,2.40773294189637,65.594044803095,0,0,0,2.76209081994573,0,6.1214552326098,3.79119477770928,0,0,0,0,0,0,0,1.66409607615766,0,0,0,6.11543338847105,0,0,0,0,1.74580229679155,0,9.94315259434343,0,0,38.4929639411743,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,63.0441303145279,45.8633019288177,0,0,0,10.3334488470734,1.14580212005842,1.43574604915363,0.399358000997982,0,0.446342914883745,0.470284307407084,0.360299883542404,0,0,0,0,0,0,56.4613079764605,71.7791950208003,0,0,0,0,0,21.6268421702568,0,0.394028536495991,0.0524545881349981,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0,0,0,55.9795201045514,59.5046707842105,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,38.9869999185474,47.4682170468637,34.803078736407,46.4461448508958,46.2574144908674,53.4650029325311,0,0,4.09452617362449,0,0,0,0,0.74627401443437,0.467426619694449,2.21922344601045,0.378806010550178,2.51567901752575,0.889811221596536,1.83072054717539,1.66354016139563,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0.107410557042488,0,0,0,12.3622453865805,8.7554867079139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.0437662402637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,1.90802610392051,0,0,0,0,28.1966298173457,25.5053837386053,34.3212796972875,29.7418728149095,5.5455773168778,15.1454382896637,33.1025073545295,49.969297090704,0,0,0,0,0.381382095467167,0,0.198916222116275,1.0529445968896,0,0.781514011233092,0,0,0,25.66428215499,35.1485144376231,32.6565138471871,21.4345438455405,3.28184885410932,0.548257766857182,2.97726707033577,0,0,5.89272019466115,4.37168838884471,4.24875922965642,2.50428410486427,0,0,0.171488009437418,41.0537187180064,23.8097440297514,0,0,2.43328587836593,40.2215910184965,0,0.913158720509496,0,0,0.714765441766563,0,0,0.173858272302579,0,0,0,0,2.58136415292167,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,2.91426595835484,0,0,0,0,0,0,0.617393264863557,0,0,1.22574160876953,0,106.00657224207,64.4590688709777,88.3350470649306,1.35941691750254,0,0.0644578879735772,0,0,0,0,0,2.2936464170227,62.4960582540328,0,17.8817619202106,3.9271562130634,0,2.23197010900051,10.1678638298912,1.29787968637137,0,0,0,0,0,0,0,15.4588544365208,16.6137760696831,51.4085052464443,59.6808386123135,5.11761556562354,1.1903221573187,0,0,0,0,0,1.30630048738177,1.71116650542641,0.134704106029175,11.1169418358648,8.98182962674236,0,0,0,0,2.34640942403454,0.488965776731466,0.406896178315738,0.665756774185513,0.402547587182052,0 | |||
|short_description=p2@SCRG1 | |||
}} |
Revision as of 04:00, 22 January 2014
Short description: | p2@SCRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SCRG1_5end |
Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
Association with transcript: | 342bp_to_NM_007281, uc003ite.2_5end |
EntrezGene: | SCRG1 |
HGNC: | 17036 |
UniProt: | O75711Q6FGG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 6.37e-08 | 9 |
carbohydrate secreting cell | 6.37e-08 | 9 |
chondroblast | 5.55e-07 | 6 |
chondrocyte | 5.55e-07 | 6 |