FFCP PHASE1:Mm9::chr14:65206197..65206209,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=729|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:65206197..65206209,+|id=chr14:65206197..65206209,+|ontology_enrichment_celltype=CL:0000117!4.59e-19!23;CL:0000337!4.59e-19!23;CL:0000540!5.49e-18!33;CL:0000047!5.49e-18!33;CL:0000031!5.49e-18!33;CL:0000404!5.49e-18!33;CL:0000393!1.72e-13!39;CL:0000211!1.72e-13!39;CL:0000221!3.05e-12!44;CL:0000133!3.05e-12!44;CL:0002319!6.13e-12!43;CL:0000055!8.02e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.10e-29,23;CL:0000337,2.10e-29,23;CL:0000540,5.25e-20,33;CL:0000047,5.25e-20,33;CL:0000031,5.25e-20,33;CL:0000404,5.25e-20,33;CL:0000393,7.53e-16,39;CL:0000211,7.53e-16,39;CL:0002319,9.73e-14,43;CL:0000221,2.84e-13,44;CL:0000133,2.84e-13,44;CL:0002609,3.70e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.50e-31!71;UBERON:0003075!4.50e-31!71;UBERON:0007284!4.50e-31!71;UBERON:0000033!5.41e-30!63;UBERON:0001017!9.19e-29!73;UBERON:0005743!9.19e-29!73;UBERON:0004121!1.87e-28!102;UBERON:0000924!1.87e-28!102;UBERON:0006601!1.87e-28!102;UBERON:0000073!2.70e-28!75;UBERON:0001016!2.70e-28!75;UBERON:0003056!2.38e-26!49;UBERON:0001049!6.70e-25!52;UBERON:0005068!6.70e-25!52;UBERON:0006241!6.70e-25!52;UBERON:0007135!6.70e-25!52;UBERON:0000955!4.85e-24!50;UBERON:0006238!4.85e-24!50;UBERON:0002616!4.35e-23!49;UBERON:0002020!4.19e-20!34;UBERON:0003080!1.41e-18!40;UBERON:0007811!4.40e-18!86;UBERON:0002780!1.03e-17!39;UBERON:0001890!1.03e-17!39;UBERON:0006240!1.03e-17!39;UBERON:0002791!9.51e-17!29;UBERON:0003528!9.51e-17!29;UBERON:0001893!9.51e-17!29;UBERON:0000153!6.77e-15!94;UBERON:0000956!3.02e-10!21;UBERON:0001869!3.02e-10!21;UBERON:0000203!3.02e-10!21;UBERON:0000970!6.62e-09!9;UBERON:0000019!6.62e-09!9;UBERON:0000047!6.62e-09!9;UBERON:0004088!6.62e-09!9;UBERON:0002104!6.62e-09!9;UBERON:0001456!6.62e-09!9;UBERON:0003072!6.62e-09!9;UBERON:0003071!6.62e-09!9;UBERON:0004128!6.62e-09!9;UBERON:0002420!3.92e-08!8;UBERON:0007245!3.92e-08!8;UBERON:0010009!3.92e-08!8;UBERON:0010011!3.92e-08!8;UBERON:0000454!3.92e-08!8;UBERON:0002619!5.07e-08!17;UBERON:0000020!5.81e-07!12;UBERON:0001032!5.81e-07!12;UBERON:0004456!5.81e-07!12;UBERON:0003076!6.71e-07!12;UBERON:0003057!6.71e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.92e-43,64;UBERON:0003075,1.92e-43,64;UBERON:0007284,1.92e-43,64;UBERON:0004121,1.07e-36,95;UBERON:0000924,1.07e-36,95;UBERON:0006601,1.07e-36,95;UBERON:0010371,1.84e-36,73;UBERON:0000073,1.88e-34,54;UBERON:0003056,3.97e-33,49;UBERON:0001017,1.17e-32,73;UBERON:0001049,7.85e-32,52;UBERON:0005068,7.85e-32,52;UBERON:0006241,7.85e-32,52;UBERON:0007135,7.85e-32,52;UBERON:0001016,1.90e-31,75;UBERON:0002020,2.61e-30,34;UBERON:0000955,1.00e-26,47;UBERON:0006238,1.00e-26,47;UBERON:0010314,3.20e-26,92;UBERON:0002616,2.35e-25,46;UBERON:0003528,5.59e-25,29;UBERON:0002791,5.59e-25,29;UBERON:0001893,5.59e-25,29;UBERON:0003080,1.34e-21,40;UBERON:0002780,2.42e-20,39;UBERON:0001890,2.42e-20,39;UBERON:0006240,2.42e-20,39;UBERON:0000956,1.02e-14,21;UBERON:0001869,1.02e-14,21;UBERON:0000203,1.02e-14,21;UBERON:0000970,3.14e-13,9;UBERON:0000019,3.14e-13,9;UBERON:0000047,3.14e-13,9;UBERON:0010312,3.14e-13,9;UBERON:0004088,3.14e-13,9;UBERON:0002104,3.14e-13,9;UBERON:0001456,3.14e-13,9;UBERON:0003072,3.14e-13,9;UBERON:0004128,3.14e-13,9;UBERON:0003071,3.14e-13,9;UBERON:0002420,5.25e-12,8;UBERON:0007245,5.25e-12,8;UBERON:0010009,5.25e-12,8;UBERON:0010011,5.25e-12,8;UBERON:0000454,5.25e-12,8;UBERON:0002619,3.22e-11,17;UBERON:0003076,1.09e-10,12;UBERON:0003057,1.09e-10,12;UBERON:0001444,2.02e-10,11;UBERON:0000020,2.26e-09,12;UBERON:0001032,2.26e-09,12;UBERON:0004456,2.26e-09,12;UBERON:0000025,7.48e-09,114;UBERON:0000033,1.73e-08,13;UBERON:0005085,1.73e-08,13;UBERON:0000369,3.45e-08,5;UBERON:0002435,3.45e-08,5;UBERON:0000204,3.45e-08,5;UBERON:0010082,3.45e-08,5;UBERON:0000483,6.53e-08,174;UBERON:0000119,1.10e-07,176;UBERON:0002240,1.19e-07,6;UBERON:0005174,1.19e-07,6;UBERON:0001137,1.19e-07,6;UBERON:0004111,1.20e-07,122;UBERON:0002021,3.26e-07,10;UBERON:0000411,3.26e-07,10;UBERON:0001950,3.26e-07,10;UBERON:0002950,9.18e-07,4;UBERON:0001891,9.18e-07,4;UBERON:0009616,9.18e-07,4;UBERON:0010286,9.18e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0.137114433605739,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46254444320914,2.11596391708813,5.07065122804943,0,0,0,0,0,0,0,1.14058573539325,1.89008313664367,1.26194976810829,1.99955689082663,1.32521124570968,3.55223317723367,3.73797336971122,5.51531271966013,4.40463523997555,3.19218345212969,2.61131106535614,5.80299666012853,3.7509933876988,4.16730696445408,4.74611098302348,2.8138130501584,2.90316670775939,1.17851434189467,1.85083185038834,3.72798891650601,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0.23517741427141,0,0,0,0,0,0,0,0,8.49064311333487,16.127396424636,0,0,0,0,4.04434726393021,2.28750301409313,3.39266750704734,1.91206752211504,1.53429274398198,3.53239675751252,3.40706652442291,0,0,0,2.94618598241064,1.17108398666433,2.75882525320168,2.16074555766419,4.67184935290717,4.49040894398764,8.19927809823039,7.77724313845749,15.0047955028629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,2.05809224758569,0,0,0,0.464473343720877,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37156238974363,3.5163505977661,0,0,0.315508219416257,1.17131623288992,0.215423397732799,0.477937595905104,0.222798674082394,0,0,0.292255857911312,0.395287777946524,4.81981974632711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0.646793418913773,0,0,0.356737635204141,0.329098041204242,0.304464949114599,0.23467170806371,0,0,0,0,0,0,0,0,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,1.38097570952153,1.71868654031819,2.23409137046794,2.74033007908257,0,2.70009000092722,1.80128481289688,1.81256963593682,0.51776031175182,0.518936737920883,1.99512436700516,1.70733605754134,0.972426868273176,0.209613162627982,0.183843508450014,0.44449345560323,0.824140228955577,0.962757628775446,2.52697211763797,0.25347929989024,0.377252682772152,0.280924522409647,0.704276676453562,0.746661096422973,0.476293691283074,0.347652977834566,0.578727661391115,0.824171801606613,0.147198920134397,0.685738504770831,0.70990322463735,0,1.16277133305863,0.658765662907314,0.423073039458382,1.28049581010941,0.263069711437843,0.543216455383447,1.12228454331548,0.830445126869219,0.492522411877817,0,0.464810523557898,0.192906610981141,1.74867404556562,2.10538447600868,0,0.191288332068843,0,0|short_description=p@chr14:65206197..65206209,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=729 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:65206197..65206209,+ | |||
|description=CAGE_peak_at_chr14:65206197..65206209,+ | |||
|id=chr14:65206197..65206209,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.59e-19!23;CL:0000337!4.59e-19!23;CL:0000540!5.49e-18!33;CL:0000047!5.49e-18!33;CL:0000031!5.49e-18!33;CL:0000404!5.49e-18!33;CL:0000393!1.72e-13!39;CL:0000211!1.72e-13!39;CL:0000221!3.05e-12!44;CL:0000133!3.05e-12!44;CL:0002319!6.13e-12!43;CL:0000055!8.02e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.10e-29,23;CL:0000337,2.10e-29,23;CL:0000540,5.25e-20,33;CL:0000047,5.25e-20,33;CL:0000031,5.25e-20,33;CL:0000404,5.25e-20,33;CL:0000393,7.53e-16,39;CL:0000211,7.53e-16,39;CL:0002319,9.73e-14,43;CL:0000221,2.84e-13,44;CL:0000133,2.84e-13,44;CL:0002609,3.70e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.50e-31!71;UBERON:0003075!4.50e-31!71;UBERON:0007284!4.50e-31!71;UBERON:0000033!5.41e-30!63;UBERON:0001017!9.19e-29!73;UBERON:0005743!9.19e-29!73;UBERON:0004121!1.87e-28!102;UBERON:0000924!1.87e-28!102;UBERON:0006601!1.87e-28!102;UBERON:0000073!2.70e-28!75;UBERON:0001016!2.70e-28!75;UBERON:0003056!2.38e-26!49;UBERON:0001049!6.70e-25!52;UBERON:0005068!6.70e-25!52;UBERON:0006241!6.70e-25!52;UBERON:0007135!6.70e-25!52;UBERON:0000955!4.85e-24!50;UBERON:0006238!4.85e-24!50;UBERON:0002616!4.35e-23!49;UBERON:0002020!4.19e-20!34;UBERON:0003080!1.41e-18!40;UBERON:0007811!4.40e-18!86;UBERON:0002780!1.03e-17!39;UBERON:0001890!1.03e-17!39;UBERON:0006240!1.03e-17!39;UBERON:0002791!9.51e-17!29;UBERON:0003528!9.51e-17!29;UBERON:0001893!9.51e-17!29;UBERON:0000153!6.77e-15!94;UBERON:0000956!3.02e-10!21;UBERON:0001869!3.02e-10!21;UBERON:0000203!3.02e-10!21;UBERON:0000970!6.62e-09!9;UBERON:0000019!6.62e-09!9;UBERON:0000047!6.62e-09!9;UBERON:0004088!6.62e-09!9;UBERON:0002104!6.62e-09!9;UBERON:0001456!6.62e-09!9;UBERON:0003072!6.62e-09!9;UBERON:0003071!6.62e-09!9;UBERON:0004128!6.62e-09!9;UBERON:0002420!3.92e-08!8;UBERON:0007245!3.92e-08!8;UBERON:0010009!3.92e-08!8;UBERON:0010011!3.92e-08!8;UBERON:0000454!3.92e-08!8;UBERON:0002619!5.07e-08!17;UBERON:0000020!5.81e-07!12;UBERON:0001032!5.81e-07!12;UBERON:0004456!5.81e-07!12;UBERON:0003076!6.71e-07!12;UBERON:0003057!6.71e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.92e-43,64;UBERON:0003075,1.92e-43,64;UBERON:0007284,1.92e-43,64;UBERON:0004121,1.07e-36,95;UBERON:0000924,1.07e-36,95;UBERON:0006601,1.07e-36,95;UBERON:0010371,1.84e-36,73;UBERON:0000073,1.88e-34,54;UBERON:0003056,3.97e-33,49;UBERON:0001017,1.17e-32,73;UBERON:0001049,7.85e-32,52;UBERON:0005068,7.85e-32,52;UBERON:0006241,7.85e-32,52;UBERON:0007135,7.85e-32,52;UBERON:0001016,1.90e-31,75;UBERON:0002020,2.61e-30,34;UBERON:0000955,1.00e-26,47;UBERON:0006238,1.00e-26,47;UBERON:0010314,3.20e-26,92;UBERON:0002616,2.35e-25,46;UBERON:0003528,5.59e-25,29;UBERON:0002791,5.59e-25,29;UBERON:0001893,5.59e-25,29;UBERON:0003080,1.34e-21,40;UBERON:0002780,2.42e-20,39;UBERON:0001890,2.42e-20,39;UBERON:0006240,2.42e-20,39;UBERON:0000956,1.02e-14,21;UBERON:0001869,1.02e-14,21;UBERON:0000203,1.02e-14,21;UBERON:0000970,3.14e-13,9;UBERON:0000019,3.14e-13,9;UBERON:0000047,3.14e-13,9;UBERON:0010312,3.14e-13,9;UBERON:0004088,3.14e-13,9;UBERON:0002104,3.14e-13,9;UBERON:0001456,3.14e-13,9;UBERON:0003072,3.14e-13,9;UBERON:0004128,3.14e-13,9;UBERON:0003071,3.14e-13,9;UBERON:0002420,5.25e-12,8;UBERON:0007245,5.25e-12,8;UBERON:0010009,5.25e-12,8;UBERON:0010011,5.25e-12,8;UBERON:0000454,5.25e-12,8;UBERON:0002619,3.22e-11,17;UBERON:0003076,1.09e-10,12;UBERON:0003057,1.09e-10,12;UBERON:0001444,2.02e-10,11;UBERON:0000020,2.26e-09,12;UBERON:0001032,2.26e-09,12;UBERON:0004456,2.26e-09,12;UBERON:0000025,7.48e-09,114;UBERON:0000033,1.73e-08,13;UBERON:0005085,1.73e-08,13;UBERON:0000369,3.45e-08,5;UBERON:0002435,3.45e-08,5;UBERON:0000204,3.45e-08,5;UBERON:0010082,3.45e-08,5;UBERON:0000483,6.53e-08,174;UBERON:0000119,1.10e-07,176;UBERON:0002240,1.19e-07,6;UBERON:0005174,1.19e-07,6;UBERON:0001137,1.19e-07,6;UBERON:0004111,1.20e-07,122;UBERON:0002021,3.26e-07,10;UBERON:0000411,3.26e-07,10;UBERON:0001950,3.26e-07,10;UBERON:0002950,9.18e-07,4;UBERON:0001891,9.18e-07,4;UBERON:0009616,9.18e-07,4;UBERON:0010286,9.18e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0.137114433605739,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46254444320914,2.11596391708813,5.07065122804943,0,0,0,0,0,0,0,1.14058573539325,1.89008313664367,1.26194976810829,1.99955689082663,1.32521124570968,3.55223317723367,3.73797336971122,5.51531271966013,4.40463523997555,3.19218345212969,2.61131106535614,5.80299666012853,3.7509933876988,4.16730696445408,4.74611098302348,2.8138130501584,2.90316670775939,1.17851434189467,1.85083185038834,3.72798891650601,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0.23517741427141,0,0,0,0,0,0,0,0,8.49064311333487,16.127396424636,0,0,0,0,4.04434726393021,2.28750301409313,3.39266750704734,1.91206752211504,1.53429274398198,3.53239675751252,3.40706652442291,0,0,0,2.94618598241064,1.17108398666433,2.75882525320168,2.16074555766419,4.67184935290717,4.49040894398764,8.19927809823039,7.77724313845749,15.0047955028629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,2.05809224758569,0,0,0,0.464473343720877,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37156238974363,3.5163505977661,0,0,0.315508219416257,1.17131623288992,0.215423397732799,0.477937595905104,0.222798674082394,0,0,0.292255857911312,0.395287777946524,4.81981974632711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0.646793418913773,0,0,0.356737635204141,0.329098041204242,0.304464949114599,0.23467170806371,0,0,0,0,0,0,0,0,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,1.38097570952153,1.71868654031819,2.23409137046794,2.74033007908257,0,2.70009000092722,1.80128481289688,1.81256963593682,0.51776031175182,0.518936737920883,1.99512436700516,1.70733605754134,0.972426868273176,0.209613162627982,0.183843508450014,0.44449345560323,0.824140228955577,0.962757628775446,2.52697211763797,0.25347929989024,0.377252682772152,0.280924522409647,0.704276676453562,0.746661096422973,0.476293691283074,0.347652977834566,0.578727661391115,0.824171801606613,0.147198920134397,0.685738504770831,0.70990322463735,0,1.16277133305863,0.658765662907314,0.423073039458382,1.28049581010941,0.263069711437843,0.543216455383447,1.12228454331548,0.830445126869219,0.492522411877817,0,0.464810523557898,0.192906610981141,1.74867404556562,2.10538447600868,0,0.191288332068843,0,0 | |||
|short_description=p@chr14:65206197..65206209,+ | |||
}} |
Latest revision as of 15:47, 4 August 2015
Short description: | p@chr14:65206197..65206209, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:65206197..65206209, + |
Coexpression cluster: | MCL_coexpression_mm9:729 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.10e-29 | 23 |
neuroblast (sensu Vertebrata) | 2.10e-29 | 23 |
neuron | 5.25e-20 | 33 |
neuronal stem cell | 5.25e-20 | 33 |
neuroblast | 5.25e-20 | 33 |
electrically signaling cell | 5.25e-20 | 33 |
electrically responsive cell | 7.53e-16 | 39 |
electrically active cell | 7.53e-16 | 39 |
neural cell | 9.73e-14 | 43 |
ectodermal cell | 2.84e-13 | 44 |
neurectodermal cell | 2.84e-13 | 44 |
neuron of cerebral cortex | 3.70e-08 | 6 |