FFCP PHASE1:Hg19::chr4:148538656..148538665,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55751 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25587 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NVA4 | |||
|association_with_transcript=117bp_to_NM_018241,uc003ila.3_5end | |||
|description=CAGE_peak_5_at_TMEM184C_5end | |||
|id=chr4:148538656..148538665,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.35e-09;3!CL:0002567;1.35e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.54e-09,3;CL:0002541,1.81e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.22e-26;1!UBERON:0003056;1.35e-09;3!UBERON:0005062;1.64e-07;4!UBERON:0007284;1.64e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;5.22e-26;1!DOID:4549;5.22e-26;1!DOID:5861;5.22e-26;1!DOID:6496;5.22e-26;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.16e-26,1;DOID:4549,2.16e-26,1;DOID:5861,2.16e-26,1;DOID:6496,2.16e-26,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;5.22e-26;1!UBERON:0000941;5.22e-26;1!UBERON:0001785;5.22e-26;1!UBERON:0002464;5.22e-26;1!UBERON:0004904;5.22e-26;1!UBERON:0001021;5.22e-26;1!UBERON:0005208;5.22e-26;1!UBERON:0004145;5.22e-26;1!UBERON:0005946;5.22e-26;1!UBERON:0005965;5.22e-26;1!UBERON:0002078;5.22e-26;1!UBERON:0003714;1.00e-13;2!UBERON:0005162;1.00e-13;2!UBERON:0000122;1.00e-13;2!UBERON:0002081;1.00e-13;2!UBERON:0002133;1.00e-13;2!UBERON:0002418;1.35e-09;3!UBERON:0003978;1.35e-09;3!UBERON:0004151;1.35e-09;3!UBERON:0000946;1.35e-09;3!UBERON:0004755;1.35e-09;3!UBERON:0003124;1.35e-09;3!UBERON:0000920;1.35e-09;3!UBERON:0002114;1.35e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,3.58e-26,1;UBERON:0005208,3.58e-26,1;UBERON:0005946,3.58e-26,1;UBERON:0005965,3.58e-26,1;UBERON:0002078,3.58e-26,1;UBERON:0000941,4.61e-26,1;UBERON:0001785,4.61e-26,1;UBERON:0002464,4.61e-26,1;UBERON:0004904,4.61e-26,1;UBERON:0001021,4.61e-26,1;UBERON:0003902,4.61e-26,1;UBERON:0005425,4.61e-26,1;UBERON:0002081,8.28e-14,2;UBERON:0002133,8.28e-14,2;UBERON:0010227,8.28e-14,2;UBERON:0003714,9.40e-14,2;UBERON:0005162,9.40e-14,2;UBERON:0000122,9.40e-14,2;UBERON:0002418,1.01e-09,3;UBERON:0004755,1.01e-09,3;UBERON:0003978,1.19e-09,3;UBERON:0009751,1.19e-09,3;UBERON:0004151,1.19e-09,3;UBERON:0000946,1.19e-09,3;UBERON:0002523,1.19e-09,3;UBERON:0005983,1.19e-09,3;UBERON:0004145,1.19e-09,3;UBERON:0002165,1.19e-09,3;UBERON:0002062,1.19e-09,3;UBERON:0007280,1.19e-09,3;UBERON:0002114,1.41e-09,2;UBERON:0000920,1.81e-09,3;UBERON:0001781,1.59e-07,4 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.563817616383885,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0.164201178899891,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0.411167888021826,0,0.28769239232215,0,0.236482229888585,0.344745680736619,0.645484683583826,0,0.376484679085209,0.272906150057846,0.674170453335254,0,0,0.639337125799041,0.329851300186716,0.598390972864896,0.852449501065388,0.870627715885752,0.56738522469114,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0,0.473447805734733,0,0,0,0,0.270803863765016,0,0.130059347559878,0.164437904603676,0,0.289803085735052,0,0,0,0,0.766440987203842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.348259474598534,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0.570471821544449,0.149448680551801,0.23486899728753,0.161872944368132,0,0,0.122834317311768,0.206651562351531,0,0.741800787835671,0,0,0,0.250237039743928,0,0,0.30648779579902,0.150238058906597,0,0,0,0.211931901159562,0,0,0,0,0,0.389748020644795,0,0.0920498986422993,0,0.355009592516614,0.10075209822764,0,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.10366105501537,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0.168584690078102,0.241011029883482,0,0,0,0,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0,0,0,0.790204397959275,0,0.246217006087397,0,0,0,0.335964256397719,0,0.0895585227028483,0,0,0,0,0,0,0.12624243342638,0,0,1.17217447210047,0,0.308482478109971,0.600686115687835,0.285826432630578,0.112131084345361,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0.224170287987055,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0,0,0.178428988797162,0,0,0,0,0,0,0.368738337083406,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.116210378459959,0,0,0.0920809889358963,0,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.27470839445503,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0,0,0.330569830721956,0,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0,0,0.18532421910392,0.572499546967965,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,0,0.438450885253763,0.578775534266688,0.655894752046633,0,0,0.281695602532241,0,0,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0.159426272728822,0.199579371432817,0,0.211673582723883,0.324621940274555,0.280797178113459,0,0,0,0.169291777801603,0,0.201799707191048,0.425846237690326,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0.111308705022906,0.16480387422676,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0.173624994933292,0.885741385813839,0,0,0.110579259931225,0,0.658156191461918,0,0.139423744278603,0.153900517007594,0.113942055847001,0,0,0,0,0.274792780205587,1.06606955203727,0,0,0,0,0,0.335643173951685,0,0.317873157960757,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0.234264445725339,0,0,0,0,0,1.53036380815245,0.126373159256976,0,0,0,0.330991955875499,0,0,0,0,0.173559738335131,0,0,0,0,0.387025325156341,0.0730893170861856,0.0821154570532092,0,1.588610280447,0.677942222341597,0,0,0,0,0,0.213452994739353,0.39961921916426,0,0,0.171594997861965,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43574604915363,0.199679000498991,0.858452096273142,0,0.0671834724867263,0,0,0.157566364614447,0,0.13480708770837,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.121499113316049,0,0.236417121897595,0.104909176269996,0.105600336519406,0,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0.226624183040251,0,0,0.129282956361551,0.39669780522807,0,0,0.213574825135389,0,0.414239055347196,0,0,0.487170393523584,0,0.544017803369474,0,0.306345576763462,0.327872630709804,0.157054096250234,0,0.244052529803926,0.250381861413,0.573409195690071,0.332787154610557,0,0,0,0,0,0.705797459094515,0,0.28984205722165,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0.449803112163605,0,0,0.265841714557995,0,0,0.380805212168795,0.406870733204662,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0.38582807654183,0.337884881306145,0,0.345430341731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| |||
|short_description=p5@TMEM184C | |||
}} |
Revision as of 03:23, 22 January 2014
Short description: | p5@TMEM184C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TMEM184C_5end |
Coexpression cluster: | NA |
Association with transcript: | 117bp_to_NM_018241, uc003ila.3_5end |
EntrezGene: | TMEM184C |
HGNC: | 25587 |
UniProt: | Q9NVA4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.54e-09 | 3 |
chorionic membrane mesenchymal stem cell | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 3.58e-26 | 1 |
right atrium valve | 3.58e-26 | 1 |
outflow tract of atrium | 3.58e-26 | 1 |
outflow part of right atrium | 3.58e-26 | 1 |
right cardiac atrium | 3.58e-26 | 1 |
cranial nerve II | 4.61e-26 | 1 |
cranial nerve | 4.61e-26 | 1 |
nerve trunk | 4.61e-26 | 1 |
nerve connecting eye with brain | 4.61e-26 | 1 |
nerve | 4.61e-26 | 1 |
retinal neural layer | 4.61e-26 | 1 |
presumptive neural retina | 4.61e-26 | 1 |
cardiac atrium | 8.28e-14 | 2 |
atrioventricular valve | 8.28e-14 | 2 |
future cardiac atrium | 8.28e-14 | 2 |
neural tissue | 9.40e-14 | 2 |
multi cell component structure | 9.40e-14 | 2 |
neuron projection bundle | 9.40e-14 | 2 |
cartilage tissue | 1.01e-09 | 3 |
skeletal tissue | 1.01e-09 | 3 |
valve | 1.19e-09 | 3 |
cardiac mesenchyme | 1.19e-09 | 3 |
cardiac chamber | 1.19e-09 | 3 |
cardial valve | 1.19e-09 | 3 |
tunica intima | 1.19e-09 | 3 |
heart layer | 1.19e-09 | 3 |
outflow tract | 1.19e-09 | 3 |
endocardium | 1.19e-09 | 3 |
endocardial cushion | 1.19e-09 | 3 |
presumptive endocardium | 1.19e-09 | 3 |
duodenum | 1.41e-09 | 2 |
egg chorion | 1.81e-09 | 3 |
layer of retina | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.16e-26 | 1 |
extraosseous chondrosarcoma | 2.16e-26 | 1 |
myxoid chondrosarcoma | 2.16e-26 | 1 |
extraskeletal myxoid chondrosarcoma | 2.16e-26 | 1 |