FFCP PHASE1:Mm9::chr14:20694506..20694548,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1941|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:20694506..20694548,-|id=chr14:20694506..20694548,-|ontology_enrichment_celltype=CL:0000540!6.18e-20!33;CL:0000047!6.18e-20!33;CL:0000031!6.18e-20!33;CL:0000404!6.18e-20!33;CL:0000117!7.41e-18!23;CL:0000337!7.41e-18!23;CL:0000221!2.08e-16!44;CL:0000133!2.08e-16!44;CL:0002319!4.84e-16!43;CL:0000393!1.45e-15!39;CL:0000211!1.45e-15!39;CL:0000055!2.10e-12!50|ontology_enrichment_celltype_v019_2=CL:0000117,6.40e-48,23;CL:0000337,6.40e-48,23;CL:0000540,2.89e-38,33;CL:0000047,2.89e-38,33;CL:0000031,2.89e-38,33;CL:0000404,2.89e-38,33;CL:0000393,1.42e-31,39;CL:0000211,1.42e-31,39;CL:0002319,3.76e-28,43;CL:0000221,2.16e-27,44;CL:0000133,2.16e-27,44;CL:0002609,7.75e-16,6;CL:0002321,2.83e-15,70;CL:0000723,5.76e-13,91;CL:0000048,5.76e-13,91;CL:0000034,8.06e-12,97;CL:0002612,2.43e-09,3;CL:0002613,3.99e-09,3;CL:0002610,7.80e-09,3;CL:0000120,1.60e-08,3;CL:0002608,1.91e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.38e-20!75;UBERON:0001016!3.38e-20!75;UBERON:0001017!5.30e-20!73;UBERON:0005743!5.30e-20!73;UBERON:0002020!2.97e-15!34;UBERON:0001049!7.12e-14!52;UBERON:0005068!7.12e-14!52;UBERON:0006241!7.12e-14!52;UBERON:0007135!7.12e-14!52;UBERON:0004121!8.42e-13!102;UBERON:0000924!8.42e-13!102;UBERON:0006601!8.42e-13!102;UBERON:0000955!1.31e-12!50;UBERON:0006238!1.31e-12!50;UBERON:0002616!2.42e-12!49;UBERON:0002791!6.41e-12!29;UBERON:0003528!6.41e-12!29;UBERON:0001893!6.41e-12!29;UBERON:0002346!2.39e-11!71;UBERON:0003075!2.39e-11!71;UBERON:0007284!2.39e-11!71;UBERON:0003080!4.11e-11!40;UBERON:0002780!7.08e-11!39;UBERON:0001890!7.08e-11!39;UBERON:0006240!7.08e-11!39;UBERON:0000033!3.16e-10!63;UBERON:0003056!3.78e-09!49;UBERON:0000956!4.42e-08!21;UBERON:0001869!4.42e-08!21;UBERON:0000203!4.42e-08!21|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.94e-37,34;UBERON:0001017,4.13e-29,73;UBERON:0003528,5.75e-29,29;UBERON:0002791,5.75e-29,29;UBERON:0001893,5.75e-29,29;UBERON:0000073,2.95e-28,54;UBERON:0001016,3.62e-28,75;UBERON:0001049,2.85e-22,52;UBERON:0005068,2.85e-22,52;UBERON:0006241,2.85e-22,52;UBERON:0007135,2.85e-22,52;UBERON:0004121,6.54e-21,95;UBERON:0000924,6.54e-21,95;UBERON:0006601,6.54e-21,95;UBERON:0002780,2.06e-20,39;UBERON:0001890,2.06e-20,39;UBERON:0006240,2.06e-20,39;UBERON:0003080,8.58e-20,40;UBERON:0000956,2.33e-18,21;UBERON:0001869,2.33e-18,21;UBERON:0000203,2.33e-18,21;UBERON:0002346,4.08e-17,64;UBERON:0003075,4.08e-17,64;UBERON:0007284,4.08e-17,64;UBERON:0002616,1.22e-16,46;UBERON:0000955,3.41e-16,47;UBERON:0006238,3.41e-16,47;UBERON:0003056,2.35e-15,49;UBERON:0010371,2.31e-14,73;UBERON:0002619,3.03e-13,17;UBERON:0002420,6.77e-12,8;UBERON:0007245,6.77e-12,8;UBERON:0010009,6.77e-12,8;UBERON:0010011,6.77e-12,8;UBERON:0000454,6.77e-12,8;UBERON:0010314,2.50e-10,92;UBERON:0002257,2.43e-09,3;UBERON:0000369,3.03e-09,5;UBERON:0002435,3.03e-09,5;UBERON:0000204,3.03e-09,5;UBERON:0010082,3.03e-09,5;UBERON:0001948,4.67e-09,5;UBERON:0002315,4.67e-09,5;UBERON:0004684,7.80e-09,3;UBERON:0002275,7.80e-09,3;UBERON:0002021,1.59e-08,10;UBERON:0000411,1.59e-08,10;UBERON:0001950,1.59e-08,10;UBERON:0002240,1.53e-07,6;UBERON:0005174,1.53e-07,6;UBERON:0001137,1.53e-07,6;UBERON:0000025,2.35e-07,114;UBERON:0011216,6.19e-07,194|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0.274228867211478,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0.683045484958446,0,0,0,0,0,0.218025156380447,0,0.388859798148567,0,0,0,0,0,0,0,0.515672092277442,2.22548106945558,7.93486468908049,1.26766280701236,0,0,0.449949858640699,0,0,0.599200221036809,0,3.52544681848824,4.72520784160917,2.52389953621658,0.571301968807607,1.32521124570968,2.20483438586917,2.49198224647415,2.75765635983006,4.40463523997555,2.042997409363,3.5329502648936,2.2420668914133,7.593474419,4.68822033501084,0.837548997004143,1.68828783009504,3.36156145108982,7.36571463684169,7.26095572075425,2.79599168737951,0.227178579999552,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.452167921657868,0.23517741427141,0,0,0,0,0.161766849947409,0.220841518460394,0.969750506270444,0,0,0.209446706813455,0,0.359445373517761,0,0.254140454146129,0.299581278809645,0,3.14135880282161,0.695297280769106,0.511430914660661,0.83115217823824,0,0.101839363850316,0.124406970610093,0,0,0,0,0.180062129805349,0.30140963567143,0.136072998302656,0,0.655912071918102,0,0.215567992932842,0.189106080167819,0.175951124163949,0.876782929710299,0.834141747676794,0,0,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0.162137619091711,0.438599962275997,0.219550115291051,0.134206418760372,0.630869845692382,2.57261530948211,0,0,0.426576501070468,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0.8988194086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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1941 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:20694506..20694548,- | |||
|description=CAGE_peak_at_chr14:20694506..20694548,- | |||
|id=chr14:20694506..20694548,- | |||
|ontology_enrichment_celltype=CL:0000540!6.18e-20!33;CL:0000047!6.18e-20!33;CL:0000031!6.18e-20!33;CL:0000404!6.18e-20!33;CL:0000117!7.41e-18!23;CL:0000337!7.41e-18!23;CL:0000221!2.08e-16!44;CL:0000133!2.08e-16!44;CL:0002319!4.84e-16!43;CL:0000393!1.45e-15!39;CL:0000211!1.45e-15!39;CL:0000055!2.10e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.40e-48,23;CL:0000337,6.40e-48,23;CL:0000540,2.89e-38,33;CL:0000047,2.89e-38,33;CL:0000031,2.89e-38,33;CL:0000404,2.89e-38,33;CL:0000393,1.42e-31,39;CL:0000211,1.42e-31,39;CL:0002319,3.76e-28,43;CL:0000221,2.16e-27,44;CL:0000133,2.16e-27,44;CL:0002609,7.75e-16,6;CL:0002321,2.83e-15,70;CL:0000723,5.76e-13,91;CL:0000048,5.76e-13,91;CL:0000034,8.06e-12,97;CL:0002612,2.43e-09,3;CL:0002613,3.99e-09,3;CL:0002610,7.80e-09,3;CL:0000120,1.60e-08,3;CL:0002608,1.91e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.38e-20!75;UBERON:0001016!3.38e-20!75;UBERON:0001017!5.30e-20!73;UBERON:0005743!5.30e-20!73;UBERON:0002020!2.97e-15!34;UBERON:0001049!7.12e-14!52;UBERON:0005068!7.12e-14!52;UBERON:0006241!7.12e-14!52;UBERON:0007135!7.12e-14!52;UBERON:0004121!8.42e-13!102;UBERON:0000924!8.42e-13!102;UBERON:0006601!8.42e-13!102;UBERON:0000955!1.31e-12!50;UBERON:0006238!1.31e-12!50;UBERON:0002616!2.42e-12!49;UBERON:0002791!6.41e-12!29;UBERON:0003528!6.41e-12!29;UBERON:0001893!6.41e-12!29;UBERON:0002346!2.39e-11!71;UBERON:0003075!2.39e-11!71;UBERON:0007284!2.39e-11!71;UBERON:0003080!4.11e-11!40;UBERON:0002780!7.08e-11!39;UBERON:0001890!7.08e-11!39;UBERON:0006240!7.08e-11!39;UBERON:0000033!3.16e-10!63;UBERON:0003056!3.78e-09!49;UBERON:0000956!4.42e-08!21;UBERON:0001869!4.42e-08!21;UBERON:0000203!4.42e-08!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.94e-37,34;UBERON:0001017,4.13e-29,73;UBERON:0003528,5.75e-29,29;UBERON:0002791,5.75e-29,29;UBERON:0001893,5.75e-29,29;UBERON:0000073,2.95e-28,54;UBERON:0001016,3.62e-28,75;UBERON:0001049,2.85e-22,52;UBERON:0005068,2.85e-22,52;UBERON:0006241,2.85e-22,52;UBERON:0007135,2.85e-22,52;UBERON:0004121,6.54e-21,95;UBERON:0000924,6.54e-21,95;UBERON:0006601,6.54e-21,95;UBERON:0002780,2.06e-20,39;UBERON:0001890,2.06e-20,39;UBERON:0006240,2.06e-20,39;UBERON:0003080,8.58e-20,40;UBERON:0000956,2.33e-18,21;UBERON:0001869,2.33e-18,21;UBERON:0000203,2.33e-18,21;UBERON:0002346,4.08e-17,64;UBERON:0003075,4.08e-17,64;UBERON:0007284,4.08e-17,64;UBERON:0002616,1.22e-16,46;UBERON:0000955,3.41e-16,47;UBERON:0006238,3.41e-16,47;UBERON:0003056,2.35e-15,49;UBERON:0010371,2.31e-14,73;UBERON:0002619,3.03e-13,17;UBERON:0002420,6.77e-12,8;UBERON:0007245,6.77e-12,8;UBERON:0010009,6.77e-12,8;UBERON:0010011,6.77e-12,8;UBERON:0000454,6.77e-12,8;UBERON:0010314,2.50e-10,92;UBERON:0002257,2.43e-09,3;UBERON:0000369,3.03e-09,5;UBERON:0002435,3.03e-09,5;UBERON:0000204,3.03e-09,5;UBERON:0010082,3.03e-09,5;UBERON:0001948,4.67e-09,5;UBERON:0002315,4.67e-09,5;UBERON:0004684,7.80e-09,3;UBERON:0002275,7.80e-09,3;UBERON:0002021,1.59e-08,10;UBERON:0000411,1.59e-08,10;UBERON:0001950,1.59e-08,10;UBERON:0002240,1.53e-07,6;UBERON:0005174,1.53e-07,6;UBERON:0001137,1.53e-07,6;UBERON:0000025,2.35e-07,114;UBERON:0011216,6.19e-07,194 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0.274228867211478,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0.683045484958446,0,0,0,0,0,0.218025156380447,0,0.388859798148567,0,0,0,0,0,0,0,0.515672092277442,2.22548106945558,7.93486468908049,1.26766280701236,0,0,0.449949858640699,0,0,0.599200221036809,0,3.52544681848824,4.72520784160917,2.52389953621658,0.571301968807607,1.32521124570968,2.20483438586917,2.49198224647415,2.75765635983006,4.40463523997555,2.042997409363,3.5329502648936,2.2420668914133,7.593474419,4.68822033501084,0.837548997004143,1.68828783009504,3.36156145108982,7.36571463684169,7.26095572075425,2.79599168737951,0.227178579999552,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.452167921657868,0.23517741427141,0,0,0,0,0.161766849947409,0.220841518460394,0.969750506270444,0,0,0.209446706813455,0,0.359445373517761,0,0.254140454146129,0.299581278809645,0,3.14135880282161,0.695297280769106,0.511430914660661,0.83115217823824,0,0.101839363850316,0.124406970610093,0,0,0,0,0.180062129805349,0.30140963567143,0.136072998302656,0,0.655912071918102,0,0.215567992932842,0.189106080167819,0.175951124163949,0.876782929710299,0.834141747676794,0,0,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0.162137619091711,0.438599962275997,0.219550115291051,0.134206418760372,0.630869845692382,2.57261530948211,0,0,0.426576501070468,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0.898819408654221,0,0,0.569003702859245,0.114248512609729,0,0.203651327845314,0.193952487167626,0.210407459670956,0.569128834118316,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0.651859905768103,0.169745085775188,0,0,0,0.390267295715598,0.157635144106191,0.664394068946325,0.159454768657487,0.163863314715738,0,0.723245292907558,3.01582567878545,1.08781136763742,0,0,0.160550589987792,0.35163505977661,0,0,0.631016438832513,0.390438744296638,0.861693590931196,0.477937595905104,1.11399337041197,0.283076530788832,1.21443210502468,0.584511715822624,0,0.321321316421807,0,0.35613120733451,0,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0,0,0,1.09060118843252,0,0,0,0,0,0,0.129358683782755,0.643011105094777,0.532020700926821,0,0.329098041204242,0.304464949114599,0,0,0,0,0,0.120625849856312,0,0,0,0.556275906031529,0,0,0,0.188368457004691,0,0,0,0,0.138199973804424,0,0.158167996790568,0,0.324016022465404,0.418176592028937,0.218362563746178,0.134864346384821,0.247960367176008,0,0.129614973291793,0,0,0.299033092087958,0,0.194451188344048,0,0.168956125490778,0.704143431874524,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,2.25900737046827,1.84130094602871,6.30185064783336,1.03111909406213,0,0,1.35004500046361,0.45032120322422,1.81256963593682,0,0.415149390336707,0.399024873401031,0.341467211508268,0.243106717068294,0.419226325255965,0.367687016900028,0.44449345560323,0.618105171716683,0,0.252697211763798,0,0.754505365544305,0.0936415074698824,0.128050304809739,0.114870937911227,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0,0,0,0.715308569841963,0.436039249896986,0.0941093804153306,0.25384382367503,0.182927972872773,0.263069711437843,0.543216455383447,0,0.237270036248348,0.394017929502254,1.63692417267876,0.464810523557898,0,0.749431733813838,0.233931608445408,0,0,0.220591419119515,0 | |||
|short_description=p@chr14:20694506..20694548,- | |||
}} |
Latest revision as of 02:18, 4 August 2015
Short description: | p@chr14:20694506..20694548, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:20694506..20694548, - |
Coexpression cluster: | MCL_coexpression_mm9:1941 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.40e-48 | 23 |
neuroblast (sensu Vertebrata) | 6.40e-48 | 23 |
neuron | 2.89e-38 | 33 |
neuronal stem cell | 2.89e-38 | 33 |
neuroblast | 2.89e-38 | 33 |
electrically signaling cell | 2.89e-38 | 33 |
electrically responsive cell | 1.42e-31 | 39 |
electrically active cell | 1.42e-31 | 39 |
neural cell | 3.76e-28 | 43 |
ectodermal cell | 2.16e-27 | 44 |
neurectodermal cell | 2.16e-27 | 44 |
neuron of cerebral cortex | 7.75e-16 | 6 |
embryonic cell | 2.83e-15 | 70 |
somatic stem cell | 5.76e-13 | 91 |
multi fate stem cell | 5.76e-13 | 91 |
stem cell | 8.06e-12 | 97 |
neuron of the ventral spinal cord | 2.43e-09 | 3 |
striatum neuron | 3.99e-09 | 3 |
raphe nuclei neuron | 7.80e-09 | 3 |
granule cell | 1.60e-08 | 3 |
hippocampal neuron | 1.91e-08 | 3 |