FFCP PHASE1:Hg19::chr3:55502593..55502619,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1929 | |||
|description=CAGE_peak_at_chr3:55502593..55502619,- | |||
|id=chr3:55502593..55502619,- | |||
|ontology_enrichment_celltype=CL:0000055!3.79e-16!180;CL:0000057!5.36e-11!75;CL:0002620!4.90e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.22e-13;19!CL:0002537;3.88e-11;5!CL:0000134;3.75e-08;55!CL:0002620;4.77e-07;23!CL:0002577;7.36e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.67e-13,19;CL:0002537,7.07e-11,5;CL:0000057,4.31e-10,76;CL:0002620,4.99e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.44e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:17;2.16e-10;5!DOID:450;2.16e-10;5!DOID:66;2.16e-10;5!DOID:423;2.16e-10;5!DOID:0080000;2.16e-10;5!DOID:11722;2.16e-10;5!DOID:2394;5.36e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.43e-10,5;DOID:450,1.43e-10,5;DOID:66,1.43e-10,5;DOID:423,1.43e-10,5;DOID:0080000,1.43e-10,5;DOID:11722,1.43e-10,5;DOID:2394,6.34e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.06e-09!14;UBERON:0000158!1.06e-09!14;UBERON:0000478!4.03e-07!24;UBERON:0000305!4.83e-07!7;UBERON:0003102!8.95e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.22e-14;7!UBERON:0005631;4.97e-13;10!UBERON:0000158;4.97e-13;10!UBERON:0000478;3.54e-10;24!UBERON:0002118;2.00e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.58e-16,14;UBERON:0000158,2.58e-16,14;UBERON:0000305,1.75e-14,7;UBERON:0004871,1.63e-12,8;UBERON:0000478,4.49e-10,24;UBERON:0003102,4.20e-08,99;UBERON:0002199,1.15e-07,46;UBERON:0002416,1.15e-07,46;UBERON:0002118,1.90e-07,5;UBERON:0004923,7.29e-07,66 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0,3.00219895059391,0,0.872338524100369,2.53299878168311,0,0,0,0,3.05817920982241,1.58260186937072,0.74259811776028,0.662794751455832,1.34465029290355,1.80808358407193,1.46062018077475,1.95173119516203,0.369363174230364,0.816002764977012,0.313454721478088,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0.232401601740905,0.284338464974843,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,1.13477044938228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,6.14446559053763,4.01070328508712,3.47631645505977,0.795285947051099,0.486634870302636,0.283604451492204,0.443458794925128,0.790513071238134,0.0654895377488563,0,0,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0,0.269421344139376,0,0.454072282934794,0,0,0.312160076830321,0,0,0.117434498643765,0.323745888736263,0,0.816616685019573,1.10550885580591,0,10.6920257155385,15.083282685992,0,0.718618141816238,0.673344455816265,0.125118519871964,0.831192346452549,1.31693286264251,4.29082914118628,4.5071417671979,0.113432183160021,1.4351170855109,3.41691822109708,2.96704661623387,1.50045548042201,2.37020817248409,0.772921620136887,2.41951913231067,0.337552664482532,0.292311015483596,0.757301322732344,2.39329736469978,0.323292113637624,1.42003837006646,1.0075209822764,0.339121184620975,0,0,0.573609190778008,0,0,0.348581828608555,0,0,0,0,7.07565032012174,0,3.71494342425583,2.88751792667834,0.946454400318751,1.18009283054671,1.44606617930089,0.55146986366197,1.30727666455444,1.18635309555548,0.943819157121151,0.784885860501384,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0.100528972411631,0,0,0,0,0,1.05667824812239,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0.87192013766656,0.1466765716419,0.129271715757778,0,0,5.85063856486715,1.04007436911366,0,1.41849132023278,0,0.285955987316295,0,0,1.30294473717494,0.355391948742546,1.58390374586686,0.602878754119172,0,1.3996218765488,0,0,0,0.239624855491583,0,1.42636905040718,0.723906533337896,1.2328579353023,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,2.49565033836969,6.60187258549499,3.94256037584837,3.86566669475954,0.300946099727719,0,1.03473071292505,0,0.368738337083406,1.91143951829782,0,0.343143423810856,0,0,0,1.21251028578504,9.98612637062982,1.20956117331872,0,0,0.280660094433074,0,0,1.12597744800525,1.48418066444991,1.54209693802656,1.06537035187876,0.574890092096664,2.59627214591811,1.27831416305955,0,1.00253235151642,0.0920809889358963,0.803701137152247,1.45672934405374,0.262248829918848,0.451199612907412,0.15403067420883,0,0,0.211103257785751,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.165018999841176,0,0,0,1.7400729292582,0,0.15350367472613,0.551346289938122,0.537101224341368,0.290033387828457,0.170453254832202,0.801288320820636,0,0,0,0.2023155617111,0,1.25924938732256,0,0,0,0.869932992075073,0,0,0.744316738719335,0,0.762520775695299,0.255897791311334,0,0,0,0.359744915166629,0.274537029736055,0.589062011728432,0,0,0.421258456238981,0.48763373908959,0.243713489631284,0,2.18399858252777,1.69686518344455,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0.196498082026242,1.426684205925,0,0.422215270595328,0,0.379473173765715,0,0,0,0,0.0941438007767792,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70481688083848,3.10367830158997,2.37571744666111,3.68592842519078,0,0,0.333926115068718,0,0,0,0,0,0,0,0.311039587661807,0,0.895105873378046,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,1.16641845353302,0.173624994933292,0,0,0,0,0,0,0,0.41827123283581,0.0769502585037971,1.82307289355202,0,0,0.325942115766024,0.957003479195758,4.39668448328939,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0.141353071433941,0,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0.311064574191741,0,0,0,0,0,0.277349346026277,0.347119476670262,0,0,0.17472666824203,0,0.19351266257817,0.146178634172371,0.164230914106418,0.0969890164884194,0,0,0.548167698587004,0.596143835108969,0,0,0,0,0.39961921916426,0,0,0.857974989309823,0,0,0,0.815425236441684,0.941425616810999,1.83596791745379,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,2.16179930125442,0,0,0,0,0.0984274815147488,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0.714695326373367,0,0,0,0,0,0,0,4.43008856642096,0.453248366080503,0,0,0,0.13223260174269,0,0.704815022316672,0,0,0,0.496166021811951,0,0,0.638341257770182,0,0,0,0,0.785270481251171,0,0,0.1251909307065,0,0.221858103073705,0,0,0,0,0,0,0,0,1.34329322598187,0.467426619694449,0,0.947015026375446,0.251567901752575,0,0,0.302461847526478,0.15543720058278,0.443565449968902,0.637187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| |||
|short_description=p@chr3:55502593..55502619,- | |||
}} |
Revision as of 19:18, 21 January 2014
Short description: | p@chr3:55502593..55502619, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:55502593..55502619, - |
Coexpression cluster: | C1929_Fibroblast_Olfactory_mesenchymal_Chondrocyte_normal_Mesenchymal_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.67e-13 | 19 |
amnion mesenchymal stem cell | 7.07e-11 | 5 |
fibroblast | 4.31e-10 | 76 |
skin fibroblast | 4.99e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.58e-16 | 14 |
membranous layer | 2.58e-16 | 14 |
amnion | 1.75e-14 | 7 |
somatic layer of lateral plate mesoderm | 1.63e-12 | 8 |
extraembryonic structure | 4.49e-10 | 24 |
surface structure | 4.20e-08 | 99 |
integument | 1.15e-07 | 46 |
integumental system | 1.15e-07 | 46 |
right ovary | 1.90e-07 | 5 |
organ component layer | 7.29e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.43e-10 | 5 |
myotonic disease | 1.43e-10 | 5 |
muscle tissue disease | 1.43e-10 | 5 |
myopathy | 1.43e-10 | 5 |
muscular disease | 1.43e-10 | 5 |
myotonic dystrophy | 1.43e-10 | 5 |
ovarian cancer | 6.34e-09 | 14 |