FFCP PHASE1:Mm9::chr13:100195782..100195809,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=158|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:100195782..100195809,-|id=chr13:100195782..100195809,-|ontology_enrichment_celltype=CL:0000540!3.22e-14!33;CL:0000047!3.22e-14!33;CL:0000031!3.22e-14!33;CL:0000404!3.22e-14!33;CL:0000117!1.48e-13!23;CL:0000337!1.48e-13!23;CL:0000393!3.76e-11!39;CL:0000211!3.76e-11!39;CL:0002319!2.77e-10!43;CL:0000221!1.00e-09!44;CL:0000133!1.00e-09!44;CL:0000055!6.65e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.01e-23,23;CL:0000337,1.01e-23,23;CL:0000540,1.27e-21,33;CL:0000047,1.27e-21,33;CL:0000031,1.27e-21,33;CL:0000404,1.27e-21,33;CL:0000393,3.23e-17,39;CL:0000211,3.23e-17,39;CL:0002319,5.61e-15,43;CL:0000221,1.75e-14,44;CL:0000133,1.75e-14,44;CL:0002609,3.54e-07,6;CL:0002321,9.53e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!5.94e-26!71;UBERON:0003075!5.94e-26!71;UBERON:0007284!5.94e-26!71;UBERON:0004121!9.24e-26!102;UBERON:0000924!9.24e-26!102;UBERON:0006601!9.24e-26!102;UBERON:0000073!3.49e-25!75;UBERON:0001016!3.49e-25!75;UBERON:0001017!9.68e-25!73;UBERON:0005743!9.68e-25!73;UBERON:0001049!3.58e-21!52;UBERON:0005068!3.58e-21!52;UBERON:0006241!3.58e-21!52;UBERON:0007135!3.58e-21!52;UBERON:0003056!1.16e-20!49;UBERON:0000033!2.04e-20!63;UBERON:0000955!4.57e-20!50;UBERON:0006238!4.57e-20!50;UBERON:0002616!1.61e-19!49;UBERON:0002020!2.40e-17!34;UBERON:0003080!2.50e-17!40;UBERON:0002780!1.14e-16!39;UBERON:0001890!1.14e-16!39;UBERON:0006240!1.14e-16!39;UBERON:0002791!2.10e-14!29;UBERON:0003528!2.10e-14!29;UBERON:0001893!2.10e-14!29;UBERON:0000956!5.85e-11!21;UBERON:0001869!5.85e-11!21;UBERON:0000203!5.85e-11!21;UBERON:0007811!8.75e-09!86;UBERON:0002619!1.79e-08!17;UBERON:0000025!2.34e-08!114;UBERON:0002021!1.05e-07!10;UBERON:0000411!1.05e-07!10;UBERON:0001950!1.05e-07!10;UBERON:0004111!6.15e-07!122;UBERON:0000153!6.62e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.65e-37,73;UBERON:0001016,7.75e-36,75;UBERON:0000073,4.23e-34,54;UBERON:0002020,2.09e-33,34;UBERON:0002346,9.11e-32,64;UBERON:0003075,9.11e-32,64;UBERON:0007284,9.11e-32,64;UBERON:0004121,1.82e-31,95;UBERON:0000924,1.82e-31,95;UBERON:0006601,1.82e-31,95;UBERON:0001049,2.41e-31,52;UBERON:0005068,2.41e-31,52;UBERON:0006241,2.41e-31,52;UBERON:0007135,2.41e-31,52;UBERON:0003528,9.07e-29,29;UBERON:0002791,9.07e-29,29;UBERON:0001893,9.07e-29,29;UBERON:0000955,1.57e-26,47;UBERON:0006238,1.57e-26,47;UBERON:0010371,1.94e-26,73;UBERON:0003056,2.02e-26,49;UBERON:0003080,4.76e-26,40;UBERON:0002616,1.70e-25,46;UBERON:0002780,9.06e-25,39;UBERON:0001890,9.06e-25,39;UBERON:0006240,9.06e-25,39;UBERON:0000956,9.77e-21,21;UBERON:0001869,9.77e-21,21;UBERON:0000203,9.77e-21,21;UBERON:0010314,1.21e-18,92;UBERON:0002619,1.46e-15,17;UBERON:0002021,2.09e-14,10;UBERON:0000411,2.09e-14,10;UBERON:0001950,2.09e-14,10;UBERON:0000025,1.75e-10,114;UBERON:0004111,3.80e-09,122;UBERON:0002420,5.11e-09,8;UBERON:0007245,5.11e-09,8;UBERON:0010009,5.11e-09,8;UBERON:0010011,5.11e-09,8;UBERON:0000454,5.11e-09,8;UBERON:0000369,2.90e-08,5;UBERON:0002435,2.90e-08,5;UBERON:0000204,2.90e-08,5;UBERON:0010082,2.90e-08,5;UBERON:0011216,4.57e-07,194;UBERON:0002240,7.14e-07,6;UBERON:0005174,7.14e-07,6;UBERON:0001137,7.14e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0.436050312760893,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,1.21389876515759,4.23192783417626,1.26766280701236,0,0,0,0,0,0,0,2.69592992002042,2.8351247049655,2.52389953621658,1.14260393761521,0.441737081903227,2.57230678351403,2.49198224647415,0.919218786610021,1.10115880999389,3.06449611404451,3.37934373163736,1.05509030184155,4.02545631850602,2.6045668527838,1.95428099300967,0,1.5279824777681,5.89257170947335,5.12538050876771,2.60959224155421,0.454357159999104,0.377857800533928,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.520455980298408,0.608930956624282,0.691846491768175,0.150722640552623,0.823120949949934,0.125666591329675,0,0.289198713839823,0,0,0,0,0,0,0.628340120440365,0,0,0,0,2.24685959107234,2.74500361691176,2.51308704225729,1.04294592115366,2.30143911597297,1.0389402227978,1.62241263067758,0.203678727700633,0.373220911830279,1.0108910337347,0.210441855886474,0.910843100738926,0.459804208866946,0.540186389416048,1.80845781402858,1.02054748726992,2.0498195245576,0.562210347358373,1.29351685369508,0,0,0,0,0.556094498451196,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0.393528463494808,0.617068451549513,0.697601834251224,0,0,0.16455984991348,0,0.243206428637567,0.146199987425332,0.219550115291051,0.268412837520744,1.05144974282064,6.07137213037778,0,0,0,0.232236671860439,0,0.201683524623343,0.22237804384487,0,0,0,0.502670417600539,0,0.38992817423824,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0.610953983535943,0,0,0,0,0.156998727841375,0.123397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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=158 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:100195782..100195809,- | |||
|description=CAGE_peak_at_chr13:100195782..100195809,- | |||
|id=chr13:100195782..100195809,- | |||
|ontology_enrichment_celltype=CL:0000540!3.22e-14!33;CL:0000047!3.22e-14!33;CL:0000031!3.22e-14!33;CL:0000404!3.22e-14!33;CL:0000117!1.48e-13!23;CL:0000337!1.48e-13!23;CL:0000393!3.76e-11!39;CL:0000211!3.76e-11!39;CL:0002319!2.77e-10!43;CL:0000221!1.00e-09!44;CL:0000133!1.00e-09!44;CL:0000055!6.65e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.01e-23,23;CL:0000337,1.01e-23,23;CL:0000540,1.27e-21,33;CL:0000047,1.27e-21,33;CL:0000031,1.27e-21,33;CL:0000404,1.27e-21,33;CL:0000393,3.23e-17,39;CL:0000211,3.23e-17,39;CL:0002319,5.61e-15,43;CL:0000221,1.75e-14,44;CL:0000133,1.75e-14,44;CL:0002609,3.54e-07,6;CL:0002321,9.53e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!5.94e-26!71;UBERON:0003075!5.94e-26!71;UBERON:0007284!5.94e-26!71;UBERON:0004121!9.24e-26!102;UBERON:0000924!9.24e-26!102;UBERON:0006601!9.24e-26!102;UBERON:0000073!3.49e-25!75;UBERON:0001016!3.49e-25!75;UBERON:0001017!9.68e-25!73;UBERON:0005743!9.68e-25!73;UBERON:0001049!3.58e-21!52;UBERON:0005068!3.58e-21!52;UBERON:0006241!3.58e-21!52;UBERON:0007135!3.58e-21!52;UBERON:0003056!1.16e-20!49;UBERON:0000033!2.04e-20!63;UBERON:0000955!4.57e-20!50;UBERON:0006238!4.57e-20!50;UBERON:0002616!1.61e-19!49;UBERON:0002020!2.40e-17!34;UBERON:0003080!2.50e-17!40;UBERON:0002780!1.14e-16!39;UBERON:0001890!1.14e-16!39;UBERON:0006240!1.14e-16!39;UBERON:0002791!2.10e-14!29;UBERON:0003528!2.10e-14!29;UBERON:0001893!2.10e-14!29;UBERON:0000956!5.85e-11!21;UBERON:0001869!5.85e-11!21;UBERON:0000203!5.85e-11!21;UBERON:0007811!8.75e-09!86;UBERON:0002619!1.79e-08!17;UBERON:0000025!2.34e-08!114;UBERON:0002021!1.05e-07!10;UBERON:0000411!1.05e-07!10;UBERON:0001950!1.05e-07!10;UBERON:0004111!6.15e-07!122;UBERON:0000153!6.62e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.65e-37,73;UBERON:0001016,7.75e-36,75;UBERON:0000073,4.23e-34,54;UBERON:0002020,2.09e-33,34;UBERON:0002346,9.11e-32,64;UBERON:0003075,9.11e-32,64;UBERON:0007284,9.11e-32,64;UBERON:0004121,1.82e-31,95;UBERON:0000924,1.82e-31,95;UBERON:0006601,1.82e-31,95;UBERON:0001049,2.41e-31,52;UBERON:0005068,2.41e-31,52;UBERON:0006241,2.41e-31,52;UBERON:0007135,2.41e-31,52;UBERON:0003528,9.07e-29,29;UBERON:0002791,9.07e-29,29;UBERON:0001893,9.07e-29,29;UBERON:0000955,1.57e-26,47;UBERON:0006238,1.57e-26,47;UBERON:0010371,1.94e-26,73;UBERON:0003056,2.02e-26,49;UBERON:0003080,4.76e-26,40;UBERON:0002616,1.70e-25,46;UBERON:0002780,9.06e-25,39;UBERON:0001890,9.06e-25,39;UBERON:0006240,9.06e-25,39;UBERON:0000956,9.77e-21,21;UBERON:0001869,9.77e-21,21;UBERON:0000203,9.77e-21,21;UBERON:0010314,1.21e-18,92;UBERON:0002619,1.46e-15,17;UBERON:0002021,2.09e-14,10;UBERON:0000411,2.09e-14,10;UBERON:0001950,2.09e-14,10;UBERON:0000025,1.75e-10,114;UBERON:0004111,3.80e-09,122;UBERON:0002420,5.11e-09,8;UBERON:0007245,5.11e-09,8;UBERON:0010009,5.11e-09,8;UBERON:0010011,5.11e-09,8;UBERON:0000454,5.11e-09,8;UBERON:0000369,2.90e-08,5;UBERON:0002435,2.90e-08,5;UBERON:0000204,2.90e-08,5;UBERON:0010082,2.90e-08,5;UBERON:0011216,4.57e-07,194;UBERON:0002240,7.14e-07,6;UBERON:0005174,7.14e-07,6;UBERON:0001137,7.14e-07,6 | |||
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|short_description=p@chr13:100195782..100195809,- | |||
}} |
Latest revision as of 12:17, 5 August 2015
Short description: | p@chr13:100195782..100195809, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:100195782..100195809, - |
Coexpression cluster: | MCL_coexpression_mm9:158 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.01e-23 | 23 |
neuroblast (sensu Vertebrata) | 1.01e-23 | 23 |
neuron | 1.27e-21 | 33 |
neuronal stem cell | 1.27e-21 | 33 |
neuroblast | 1.27e-21 | 33 |
electrically signaling cell | 1.27e-21 | 33 |
electrically responsive cell | 3.23e-17 | 39 |
electrically active cell | 3.23e-17 | 39 |
neural cell | 5.61e-15 | 43 |
ectodermal cell | 1.75e-14 | 44 |
neurectodermal cell | 1.75e-14 | 44 |
neuron of cerebral cortex | 3.54e-07 | 6 |
embryonic cell | 9.53e-07 | 70 |