FFCP PHASE1:Mm9::chr12:88331519..88331538,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=189|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:88331519..88331538,-|id=chr12:88331519..88331538,-|ontology_enrichment_celltype=CL:0000117!3.26e-15!23;CL:0000337!3.26e-15!23;CL:0000540!8.76e-11!33;CL:0000047!8.76e-11!33;CL:0000031!8.76e-11!33;CL:0000404!8.76e-11!33;CL:0002319!2.04e-10!43;CL:0000221!6.05e-10!44;CL:0000133!6.05e-10!44;CL:0000393!8.63e-08!39;CL:0000211!8.63e-08!39;CL:0000055!1.45e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,8.41e-21,23;CL:0000337,8.41e-21,23;CL:0000540,5.64e-13,33;CL:0000047,5.64e-13,33;CL:0000031,5.64e-13,33;CL:0000404,5.64e-13,33;CL:0000393,3.08e-10,39;CL:0000211,3.08e-10,39;CL:0002319,6.61e-10,43;CL:0000221,1.44e-09,44;CL:0000133,1.44e-09,44;CL:0002610,5.18e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.65e-27!75;UBERON:0001016!4.65e-27!75;UBERON:0001017!2.63e-26!73;UBERON:0005743!2.63e-26!73;UBERON:0002346!7.33e-26!71;UBERON:0003075!7.33e-26!71;UBERON:0007284!7.33e-26!71;UBERON:0004121!7.99e-25!102;UBERON:0000924!7.99e-25!102;UBERON:0006601!7.99e-25!102;UBERON:0000033!3.77e-24!63;UBERON:0001049!1.02e-23!52;UBERON:0005068!1.02e-23!52;UBERON:0006241!1.02e-23!52;UBERON:0007135!1.02e-23!52;UBERON:0000955!2.25e-22!50;UBERON:0006238!2.25e-22!50;UBERON:0003056!5.84e-22!49;UBERON:0002616!1.22e-21!49;UBERON:0002020!4.00e-21!34;UBERON:0003080!1.94e-17!40;UBERON:0002791!4.35e-17!29;UBERON:0003528!4.35e-17!29;UBERON:0001893!4.35e-17!29;UBERON:0002780!1.42e-16!39;UBERON:0001890!1.42e-16!39;UBERON:0006240!1.42e-16!39;UBERON:0007811!7.72e-14!86;UBERON:0000153!3.80e-11!94;UBERON:0000956!7.74e-11!21;UBERON:0001869!7.74e-11!21;UBERON:0000203!7.74e-11!21;UBERON:0002619!3.28e-10!17;UBERON:0002021!2.61e-09!10;UBERON:0000411!2.61e-09!10;UBERON:0001950!2.61e-09!10;UBERON:0002420!9.60e-08!8;UBERON:0007245!9.60e-08!8;UBERON:0010009!9.60e-08!8;UBERON:0010011!9.60e-08!8;UBERON:0000454!9.60e-08!8;UBERON:0002298!5.85e-07!6;UBERON:0003076!6.57e-07!12;UBERON:0003057!6.57e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.67e-39,54;UBERON:0001017,3.91e-37,73;UBERON:0002346,3.19e-36,64;UBERON:0003075,3.19e-36,64;UBERON:0007284,3.19e-36,64;UBERON:0001016,7.65e-36,75;UBERON:0001049,1.39e-35,52;UBERON:0005068,1.39e-35,52;UBERON:0006241,1.39e-35,52;UBERON:0007135,1.39e-35,52;UBERON:0004121,1.39e-33,95;UBERON:0000924,1.39e-33,95;UBERON:0006601,1.39e-33,95;UBERON:0002020,1.12e-30,34;UBERON:0010371,1.98e-30,73;UBERON:0000955,3.17e-28,47;UBERON:0006238,3.17e-28,47;UBERON:0003056,5.48e-28,49;UBERON:0002616,5.50e-27,46;UBERON:0003080,2.80e-25,40;UBERON:0002780,8.98e-24,39;UBERON:0001890,8.98e-24,39;UBERON:0006240,8.98e-24,39;UBERON:0003528,1.61e-23,29;UBERON:0002791,1.61e-23,29;UBERON:0001893,1.61e-23,29;UBERON:0010314,6.22e-22,92;UBERON:0002021,5.67e-16,10;UBERON:0000411,5.67e-16,10;UBERON:0001950,5.67e-16,10;UBERON:0002619,4.72e-14,17;UBERON:0002420,4.56e-13,8;UBERON:0007245,4.56e-13,8;UBERON:0010009,4.56e-13,8;UBERON:0010011,4.56e-13,8;UBERON:0000454,4.56e-13,8;UBERON:0000956,9.04e-13,21;UBERON:0001869,9.04e-13,21;UBERON:0000203,9.04e-13,21;UBERON:0000025,5.60e-11,114;UBERON:0003076,1.92e-10,12;UBERON:0003057,1.92e-10,12;UBERON:0002240,2.71e-10,6;UBERON:0005174,2.71e-10,6;UBERON:0001137,2.71e-10,6;UBERON:0004111,1.18e-09,122;UBERON:0001948,1.27e-08,5;UBERON:0002315,1.27e-08,5;UBERON:0002950,2.72e-08,4;UBERON:0001891,2.72e-08,4;UBERON:0009616,2.72e-08,4;UBERON:0010286,2.72e-08,4;UBERON:0000369,4.62e-08,5;UBERON:0002435,4.62e-08,5;UBERON:0000204,4.62e-08,5;UBERON:0010082,4.62e-08,5;UBERON:0011216,4.91e-07,194;UBERON:0004684,5.18e-07,3;UBERON:0002275,5.18e-07,3;UBERON:0000483,9.94e-07,174|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,2.02316460859598,2.64495489636016,3.1691570175309,0,0,0,0,0,0.299600110518405,1.15265491596466,0.518448061542388,0.405017814995072,0,8.56952953211411,7.06779331045163,0.122490799214954,0.191690942036473,1.83843757322004,36.3382407297983,34.9863306353414,33.9470438496298,2.90149833006426,3.84248103130121,4.16730696445408,13.959149950069,15.757353080887,9.32069311438542,4.71405736757868,5.41012387036591,3.16879057903011,0.37863096666592,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0,0,0,0.150722640552623,0.587943535678524,0,0,0,0,0,0,0,0,1.17112318804619,0.83778682725382,0,0,0,0,11.0845073159569,7.32000964509802,1.25654352112864,8.8650403298061,5.8814555185976,29.5059023274575,20.766881672673,0,0,0,2.31486041475121,0.130120442962704,0.459804208866946,0.180062129805349,0.452114453507145,1.02054748726992,1.66547836370305,1.78033276663485,5.17406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,3.36463917702604,1.02904612379284,0,0,0,0,0,0.201683524623343,0,0,0,0.164698954724011,0.502670417600539,0.198956472041151,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=189 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:88331519..88331538,- | |||
|description=CAGE_peak_at_chr12:88331519..88331538,- | |||
|id=chr12:88331519..88331538,- | |||
|ontology_enrichment_celltype=CL:0000117!3.26e-15!23;CL:0000337!3.26e-15!23;CL:0000540!8.76e-11!33;CL:0000047!8.76e-11!33;CL:0000031!8.76e-11!33;CL:0000404!8.76e-11!33;CL:0002319!2.04e-10!43;CL:0000221!6.05e-10!44;CL:0000133!6.05e-10!44;CL:0000393!8.63e-08!39;CL:0000211!8.63e-08!39;CL:0000055!1.45e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.41e-21,23;CL:0000337,8.41e-21,23;CL:0000540,5.64e-13,33;CL:0000047,5.64e-13,33;CL:0000031,5.64e-13,33;CL:0000404,5.64e-13,33;CL:0000393,3.08e-10,39;CL:0000211,3.08e-10,39;CL:0002319,6.61e-10,43;CL:0000221,1.44e-09,44;CL:0000133,1.44e-09,44;CL:0002610,5.18e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.65e-27!75;UBERON:0001016!4.65e-27!75;UBERON:0001017!2.63e-26!73;UBERON:0005743!2.63e-26!73;UBERON:0002346!7.33e-26!71;UBERON:0003075!7.33e-26!71;UBERON:0007284!7.33e-26!71;UBERON:0004121!7.99e-25!102;UBERON:0000924!7.99e-25!102;UBERON:0006601!7.99e-25!102;UBERON:0000033!3.77e-24!63;UBERON:0001049!1.02e-23!52;UBERON:0005068!1.02e-23!52;UBERON:0006241!1.02e-23!52;UBERON:0007135!1.02e-23!52;UBERON:0000955!2.25e-22!50;UBERON:0006238!2.25e-22!50;UBERON:0003056!5.84e-22!49;UBERON:0002616!1.22e-21!49;UBERON:0002020!4.00e-21!34;UBERON:0003080!1.94e-17!40;UBERON:0002791!4.35e-17!29;UBERON:0003528!4.35e-17!29;UBERON:0001893!4.35e-17!29;UBERON:0002780!1.42e-16!39;UBERON:0001890!1.42e-16!39;UBERON:0006240!1.42e-16!39;UBERON:0007811!7.72e-14!86;UBERON:0000153!3.80e-11!94;UBERON:0000956!7.74e-11!21;UBERON:0001869!7.74e-11!21;UBERON:0000203!7.74e-11!21;UBERON:0002619!3.28e-10!17;UBERON:0002021!2.61e-09!10;UBERON:0000411!2.61e-09!10;UBERON:0001950!2.61e-09!10;UBERON:0002420!9.60e-08!8;UBERON:0007245!9.60e-08!8;UBERON:0010009!9.60e-08!8;UBERON:0010011!9.60e-08!8;UBERON:0000454!9.60e-08!8;UBERON:0002298!5.85e-07!6;UBERON:0003076!6.57e-07!12;UBERON:0003057!6.57e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.67e-39,54;UBERON:0001017,3.91e-37,73;UBERON:0002346,3.19e-36,64;UBERON:0003075,3.19e-36,64;UBERON:0007284,3.19e-36,64;UBERON:0001016,7.65e-36,75;UBERON:0001049,1.39e-35,52;UBERON:0005068,1.39e-35,52;UBERON:0006241,1.39e-35,52;UBERON:0007135,1.39e-35,52;UBERON:0004121,1.39e-33,95;UBERON:0000924,1.39e-33,95;UBERON:0006601,1.39e-33,95;UBERON:0002020,1.12e-30,34;UBERON:0010371,1.98e-30,73;UBERON:0000955,3.17e-28,47;UBERON:0006238,3.17e-28,47;UBERON:0003056,5.48e-28,49;UBERON:0002616,5.50e-27,46;UBERON:0003080,2.80e-25,40;UBERON:0002780,8.98e-24,39;UBERON:0001890,8.98e-24,39;UBERON:0006240,8.98e-24,39;UBERON:0003528,1.61e-23,29;UBERON:0002791,1.61e-23,29;UBERON:0001893,1.61e-23,29;UBERON:0010314,6.22e-22,92;UBERON:0002021,5.67e-16,10;UBERON:0000411,5.67e-16,10;UBERON:0001950,5.67e-16,10;UBERON:0002619,4.72e-14,17;UBERON:0002420,4.56e-13,8;UBERON:0007245,4.56e-13,8;UBERON:0010009,4.56e-13,8;UBERON:0010011,4.56e-13,8;UBERON:0000454,4.56e-13,8;UBERON:0000956,9.04e-13,21;UBERON:0001869,9.04e-13,21;UBERON:0000203,9.04e-13,21;UBERON:0000025,5.60e-11,114;UBERON:0003076,1.92e-10,12;UBERON:0003057,1.92e-10,12;UBERON:0002240,2.71e-10,6;UBERON:0005174,2.71e-10,6;UBERON:0001137,2.71e-10,6;UBERON:0004111,1.18e-09,122;UBERON:0001948,1.27e-08,5;UBERON:0002315,1.27e-08,5;UBERON:0002950,2.72e-08,4;UBERON:0001891,2.72e-08,4;UBERON:0009616,2.72e-08,4;UBERON:0010286,2.72e-08,4;UBERON:0000369,4.62e-08,5;UBERON:0002435,4.62e-08,5;UBERON:0000204,4.62e-08,5;UBERON:0010082,4.62e-08,5;UBERON:0011216,4.91e-07,194;UBERON:0004684,5.18e-07,3;UBERON:0002275,5.18e-07,3;UBERON:0000483,9.94e-07,174 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,2.02316460859598,2.64495489636016,3.1691570175309,0,0,0,0,0,0.299600110518405,1.15265491596466,0.518448061542388,0.405017814995072,0,8.56952953211411,7.06779331045163,0.122490799214954,0.191690942036473,1.83843757322004,36.3382407297983,34.9863306353414,33.9470438496298,2.90149833006426,3.84248103130121,4.16730696445408,13.959149950069,15.757353080887,9.32069311438542,4.71405736757868,5.41012387036591,3.16879057903011,0.37863096666592,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0,0,0,0.150722640552623,0.587943535678524,0,0,0,0,0,0,0,0,1.17112318804619,0.83778682725382,0,0,0,0,11.0845073159569,7.32000964509802,1.25654352112864,8.8650403298061,5.8814555185976,29.5059023274575,20.766881672673,0,0,0,2.31486041475121,0.130120442962704,0.459804208866946,0.180062129805349,0.452114453507145,1.02054748726992,1.66547836370305,1.78033276663485,5.17406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,3.36463917702604,1.02904612379284,0,0,0,0,0,0.201683524623343,0,0,0,0.164698954724011,0.502670417600539,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8807436590966,10.7834751664827,0,0,0,0,0.430846795465598,0,0,0,0.404810701674894,0.584511715822624,0,2.89189184779626,0.141940085208269,0,0,0,0,0,0,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0.713475270408282,1.97458824722545,3.34911444026059,0,0,0,0,0,0,0,0,0,11.3109434226411,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.404593039154462,0.247960367176008,0,0,0,0,0,0,0,0.129159823477731,0.337912250981556,0.352071715937262,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0.192423683280659,0,0,0,0,0,0,0,0,0,0,9.60078132449013,5.52390283808612,8.59343270159095,5.15559547031063,6.85082519770642,1.5107877947794,2.70009000092722,10.8077088773813,9.06284817968409,6.73088405277366,0,1.19707462020309,0.512200817262403,0,0.419226325255965,0.551530525350042,0.44449345560323,1.23621034343337,0,1.01078884705519,0.50695859978048,0.565879024158229,0.280924522409647,0.512201219238954,0.746661096422973,0,0.927074607558844,0.38581844092741,0.412085900803307,1.03039244094078,0.342869252385415,0.887379030796687,0.238436189947321,0.436039249896986,0.376437521661322,0.0846146078916765,0.73171189149109,0.263069711437843,0.407412341537585,0,0.949080144993393,0.788035859004508,0.409231043169689,0.464810523557898,0.192906610981141,1.24905288968973,0.935726433781634,0.214871054048298,0.765153328275374,0.882365676478062,0.695603506861264 | |||
|short_description=p@chr12:88331519..88331538,- | |||
}} |
Latest revision as of 10:55, 5 August 2015
Short description: | p@chr12:88331519..88331538, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:88331519..88331538, - |
Coexpression cluster: | MCL_coexpression_mm9:189 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.41e-21 | 23 |
neuroblast (sensu Vertebrata) | 8.41e-21 | 23 |
neuron | 5.64e-13 | 33 |
neuronal stem cell | 5.64e-13 | 33 |
neuroblast | 5.64e-13 | 33 |
electrically signaling cell | 5.64e-13 | 33 |
electrically responsive cell | 3.08e-10 | 39 |
electrically active cell | 3.08e-10 | 39 |
neural cell | 6.61e-10 | 43 |
ectodermal cell | 1.44e-09 | 44 |
neurectodermal cell | 1.44e-09 | 44 |
raphe nuclei neuron | 5.18e-07 | 3 |