FFCP PHASE1:Mm9::chr12:112667369..112667383,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:112667369..112667383,+|id=chr12:112667369..112667383,+|ontology_enrichment_celltype=CL:0000239!1.44e-10!6;CL:0000677!1.44e-10!6;CL:0000212!1.44e-10!6;CL:0000584!1.44e-10!6;CL:0000075!6.85e-09!7;CL:0002563!1.04e-08!9;CL:0002251!1.04e-08!9|ontology_enrichment_celltype_v019_2=CL:0000239,1.16e-23,6;CL:0000677,1.16e-23,6;CL:0000584,1.16e-23,6;CL:0000075,3.23e-20,7;CL:0002563,1.29e-15,9;CL:0002251,1.29e-15,9;CL:0000682,1.98e-13,3;CL:0000066,6.54e-12,25;CL:0002076,3.72e-09,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.73e-19!43;UBERON:0005409!4.58e-19!59;UBERON:0000344!2.70e-17!15;UBERON:0001242!2.71e-14!13;UBERON:0000060!2.71e-14!13;UBERON:0001262!2.71e-14!13;UBERON:0004786!2.71e-14!13;UBERON:0004923!8.23e-14!24;UBERON:0001007!4.26e-09!128;UBERON:0001555!4.26e-09!128;UBERON:0007026!4.26e-09!128;UBERON:0004119!8.47e-09!130;UBERON:0000925!8.47e-09!130;UBERON:0006595!8.47e-09!130;UBERON:0003350!1.04e-08!9;UBERON:0004808!1.04e-08!9;UBERON:0001277!1.04e-08!9;UBERON:0004921!8.80e-08!126;UBERON:0004185!8.80e-08!126;UBERON:0000485!7.40e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.85e-33,31;UBERON:0000344,1.10e-30,15;UBERON:0001242,9.62e-24,13;UBERON:0001262,9.62e-24,13;UBERON:0004786,9.62e-24,13;UBERON:0005409,8.56e-21,47;UBERON:0004923,1.77e-18,24;UBERON:0002108,4.40e-16,4;UBERON:0003350,1.29e-15,9;UBERON:0004808,1.29e-15,9;UBERON:0001277,1.29e-15,9;UBERON:0000331,9.42e-13,3;UBERON:0002116,9.42e-13,3;UBERON:0001204,9.42e-13,3;UBERON:0001168,9.42e-13,3;UBERON:0000485,1.10e-12,11;UBERON:0001962,4.18e-09,2;UBERON:0001961,4.18e-09,2;UBERON:0001744,4.18e-09,2;UBERON:0001007,7.81e-09,116;UBERON:0001555,7.81e-09,116;UBERON:0007026,7.81e-09,116;UBERON:0004119,1.26e-08,118;UBERON:0000925,1.26e-08,118;UBERON:0006595,1.26e-08,118;UBERON:0004921,8.90e-07,114|phase1_expression=0,6.63053274514786,5.91499011206397,2.41971369045464,3.00537437967808,2.01455126294268,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19984845586813,2.98232065387321,9.18771142584032,6.8921919385452,6.46413698057667,1.90023419456374,2.77233142735924,7.76056787293567,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432982082022428,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.36012412292203,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,1.32225283331772,0,0,0,0.403367049246685,0.22237804384487,1.52180500890047,0.949058123089023,1.15289268306808,0.251335208800269,0.994782360205754,2.14460495831032,0.898819408654221,1.08069024937347,1.39398891278057,0.379335801906163,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,1.45740418314925,0,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0.135804113845862,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr12:112667369..112667383,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:112667369..112667383,+ | |||
|description=CAGE_peak_at_chr12:112667369..112667383,+ | |||
|id=chr12:112667369..112667383,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.44e-10!6;CL:0000677!1.44e-10!6;CL:0000212!1.44e-10!6;CL:0000584!1.44e-10!6;CL:0000075!6.85e-09!7;CL:0002563!1.04e-08!9;CL:0002251!1.04e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.16e-23,6;CL:0000677,1.16e-23,6;CL:0000584,1.16e-23,6;CL:0000075,3.23e-20,7;CL:0002563,1.29e-15,9;CL:0002251,1.29e-15,9;CL:0000682,1.98e-13,3;CL:0000066,6.54e-12,25;CL:0002076,3.72e-09,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.73e-19!43;UBERON:0005409!4.58e-19!59;UBERON:0000344!2.70e-17!15;UBERON:0001242!2.71e-14!13;UBERON:0000060!2.71e-14!13;UBERON:0001262!2.71e-14!13;UBERON:0004786!2.71e-14!13;UBERON:0004923!8.23e-14!24;UBERON:0001007!4.26e-09!128;UBERON:0001555!4.26e-09!128;UBERON:0007026!4.26e-09!128;UBERON:0004119!8.47e-09!130;UBERON:0000925!8.47e-09!130;UBERON:0006595!8.47e-09!130;UBERON:0003350!1.04e-08!9;UBERON:0004808!1.04e-08!9;UBERON:0001277!1.04e-08!9;UBERON:0004921!8.80e-08!126;UBERON:0004185!8.80e-08!126;UBERON:0000485!7.40e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.85e-33,31;UBERON:0000344,1.10e-30,15;UBERON:0001242,9.62e-24,13;UBERON:0001262,9.62e-24,13;UBERON:0004786,9.62e-24,13;UBERON:0005409,8.56e-21,47;UBERON:0004923,1.77e-18,24;UBERON:0002108,4.40e-16,4;UBERON:0003350,1.29e-15,9;UBERON:0004808,1.29e-15,9;UBERON:0001277,1.29e-15,9;UBERON:0000331,9.42e-13,3;UBERON:0002116,9.42e-13,3;UBERON:0001204,9.42e-13,3;UBERON:0001168,9.42e-13,3;UBERON:0000485,1.10e-12,11;UBERON:0001962,4.18e-09,2;UBERON:0001961,4.18e-09,2;UBERON:0001744,4.18e-09,2;UBERON:0001007,7.81e-09,116;UBERON:0001555,7.81e-09,116;UBERON:0007026,7.81e-09,116;UBERON:0004119,1.26e-08,118;UBERON:0000925,1.26e-08,118;UBERON:0006595,1.26e-08,118;UBERON:0004921,8.90e-07,114 | |||
|phase1_expression=0,6.63053274514786,5.91499011206397,2.41971369045464,3.00537437967808,2.01455126294268,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19984845586813,2.98232065387321,9.18771142584032,6.8921919385452,6.46413698057667,1.90023419456374,2.77233142735924,7.76056787293567,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432982082022428,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.36012412292203,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,1.32225283331772,0,0,0,0.403367049246685,0.22237804384487,1.52180500890047,0.949058123089023,1.15289268306808,0.251335208800269,0.994782360205754,2.14460495831032,0.898819408654221,1.08069024937347,1.39398891278057,0.379335801906163,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,1.45740418314925,0,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0.135804113845862,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr12:112667369..112667383,+ | |||
}} |
Latest revision as of 18:12, 4 August 2015
Short description: | p@chr12:112667369..112667383, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:112667369..112667383, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.16e-23 | 6 |
gut absorptive cell | 1.16e-23 | 6 |
enterocyte | 1.16e-23 | 6 |
columnar/cuboidal epithelial cell | 3.23e-20 | 7 |
intestinal epithelial cell | 1.29e-15 | 9 |
epithelial cell of alimentary canal | 1.29e-15 | 9 |
M cell of gut | 1.98e-13 | 3 |
epithelial cell | 6.54e-12 | 25 |
endo-epithelial cell | 3.72e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.85e-33 | 31 |
mucosa | 1.10e-30 | 15 |
intestinal mucosa | 9.62e-24 | 13 |
wall of intestine | 9.62e-24 | 13 |
gastrointestinal system mucosa | 9.62e-24 | 13 |
gastrointestinal system | 8.56e-21 | 47 |
organ component layer | 1.77e-18 | 24 |
small intestine | 4.40e-16 | 4 |
epithelium of mucosa | 1.29e-15 | 9 |
gastrointestinal system epithelium | 1.29e-15 | 9 |
intestinal epithelium | 1.29e-15 | 9 |
ileal mucosa | 9.42e-13 | 3 |
ileum | 9.42e-13 | 3 |
mucosa of small intestine | 9.42e-13 | 3 |
wall of small intestine | 9.42e-13 | 3 |
simple columnar epithelium | 1.10e-12 | 11 |
gut-associated lymphoid tissue | 4.18e-09 | 2 |
mucosa-associated lymphoid tissue | 4.18e-09 | 2 |
lymphoid tissue | 4.18e-09 | 2 |
digestive system | 7.81e-09 | 116 |
digestive tract | 7.81e-09 | 116 |
primitive gut | 7.81e-09 | 116 |
endoderm-derived structure | 1.26e-08 | 118 |
endoderm | 1.26e-08 | 118 |
presumptive endoderm | 1.26e-08 | 118 |
subdivision of digestive tract | 8.90e-07 | 114 |