FFCP PHASE1:Mm9::chr12:109513404..109513427,-: Difference between revisions
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{{FFCP|EntrezGene=668158|HGNC=|MCL_coexpression_id=1|UniProt=E9Q6B2|association_with_transcript=199bp_to_ENSMUST00000136175,NM_001159910,uc011yrs.1_5end|description=CAGE_peak_3_at_Ccdc85c_5end|id=chr12:109513404..109513427,-|ontology_enrichment_celltype=CL:0000117!9.46e-13!23;CL:0000337!9.46e-13!23;CL:0000540!1.69e-11!33;CL:0000047!1.69e-11!33;CL:0000031!1.69e-11!33;CL:0000404!1.69e-11!33;CL:0000221!3.78e-11!44;CL:0000133!3.78e-11!44;CL:0002319!8.08e-11!43;CL:0000055!1.90e-08!50;CL:0000393!4.19e-08!39;CL:0000211!4.19e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.31e-19,23;CL:0000337,1.31e-19,23;CL:0000540,1.21e-13,33;CL:0000047,1.21e-13,33;CL:0000031,1.21e-13,33;CL:0000404,1.21e-13,33;CL:0002319,9.88e-12,43;CL:0000221,2.43e-11,44;CL:0000133,2.43e-11,44;CL:0000393,8.81e-11,39;CL:0000211,8.81e-11,39;CL:0002614,8.99e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.17e-25!73;UBERON:0005743!7.17e-25!73;UBERON:0000073!1.26e-23!75;UBERON:0001016!1.26e-23!75;UBERON:0002346!1.72e-23!71;UBERON:0003075!1.72e-23!71;UBERON:0007284!1.72e-23!71;UBERON:0004121!5.51e-23!102;UBERON:0000924!5.51e-23!102;UBERON:0006601!5.51e-23!102;UBERON:0000033!5.50e-22!63;UBERON:0001049!1.31e-20!52;UBERON:0005068!1.31e-20!52;UBERON:0006241!1.31e-20!52;UBERON:0007135!1.31e-20!52;UBERON:0000955!2.43e-19!50;UBERON:0006238!2.43e-19!50;UBERON:0002616!1.11e-18!49;UBERON:0003056!2.01e-17!49;UBERON:0007811!1.08e-16!86;UBERON:0002020!3.11e-16!34;UBERON:0003080!6.05e-15!40;UBERON:0000153!1.88e-14!94;UBERON:0002780!3.03e-14!39;UBERON:0001890!3.03e-14!39;UBERON:0006240!3.03e-14!39;UBERON:0002791!3.21e-13!29;UBERON:0003528!3.21e-13!29;UBERON:0001893!3.21e-13!29;UBERON:0000956!1.47e-08!21;UBERON:0001869!1.47e-08!21;UBERON:0000203!1.47e-08!21;UBERON:0002619!3.14e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.01e-32,64;UBERON:0003075,2.01e-32,64;UBERON:0007284,2.01e-32,64;UBERON:0001017,2.79e-32,73;UBERON:0004121,1.60e-31,95;UBERON:0000924,1.60e-31,95;UBERON:0006601,1.60e-31,95;UBERON:0001016,3.96e-31,75;UBERON:0000073,1.29e-29,54;UBERON:0010371,3.86e-27,73;UBERON:0001049,5.11e-27,52;UBERON:0005068,5.11e-27,52;UBERON:0006241,5.11e-27,52;UBERON:0007135,5.11e-27,52;UBERON:0002020,8.64e-23,34;UBERON:0000955,1.33e-20,47;UBERON:0006238,1.33e-20,47;UBERON:0003056,2.31e-20,49;UBERON:0010314,2.12e-19,92;UBERON:0002616,2.48e-19,46;UBERON:0003528,2.74e-16,29;UBERON:0002791,2.74e-16,29;UBERON:0001893,2.74e-16,29;UBERON:0003080,2.50e-15,40;UBERON:0002780,4.82e-14,39;UBERON:0001890,4.82e-14,39;UBERON:0006240,4.82e-14,39;UBERON:0003076,1.36e-13,12;UBERON:0003057,1.36e-13,12;UBERON:0002420,5.11e-13,8;UBERON:0007245,5.11e-13,8;UBERON:0010009,5.11e-13,8;UBERON:0010011,5.11e-13,8;UBERON:0000454,5.11e-13,8;UBERON:0002240,3.03e-10,6;UBERON:0005174,3.03e-10,6;UBERON:0001137,3.03e-10,6;UBERON:0000025,3.78e-09,114;UBERON:0004111,1.22e-08,122;UBERON:0001948,1.27e-08,5;UBERON:0002315,1.27e-08,5;UBERON:0002950,1.52e-08,4;UBERON:0001891,1.52e-08,4;UBERON:0009616,1.52e-08,4;UBERON:0010286,1.52e-08,4;UBERON:0000369,6.86e-08,5;UBERON:0002435,6.86e-08,5;UBERON:0000204,6.86e-08,5;UBERON:0010082,6.86e-08,5;UBERON:0002619,1.27e-07,17;UBERON:0000956,3.96e-07,21;UBERON:0001869,3.96e-07,21;UBERON:0000203,3.96e-07,21;UBERON:0002021,5.31e-07,10;UBERON:0000411,5.31e-07,10;UBERON:0001950,5.31e-07,10;UBERON:0002038,8.99e-07,3;UBERON:0009663,8.99e-07,3;UBERON:0009661,8.99e-07,3;UBERON:0000125,8.99e-07,3;UBERON:0002308,8.99e-07,3;UBERON:0000483,9.38e-07,174|phase1_expression=0.480446541314382,0,0.454999239389536,0.60492842261366,0,0.33575854382378,0,0,0,0.234064526321993,0.34243593645101,0.398860794976682,0,0,0.333109761815663,0,0,0,0,0,1.44573593256819,0.496454756004426,0.261199789138935,0.159992422793407,0,0,0.86152399231815,0.215471232685889,0,0.252030129759931,0,0.635030673459631,0,0,0.577703239502549,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.659058548203415,0.777719596297134,0,1.43752564364972,0,0,0,0,0,0.515672092277442,1.82084814773638,1.05798195854407,1.26766280701236,0,0.889294796111139,0,0,0,0.599200221036809,1.53687322128622,0.622137673850866,0.675029691658453,0.630974884054146,3.99911378165325,4.63823935998388,0.61245399607477,0.766763768145891,1.83843757322004,1.10115880999389,4.08599481872601,4.30098293117482,1.45074916503213,2.37867873366265,1.04182674111352,5.58365998002762,4.50210088025344,4.12555268997387,1.17851434189467,2.98980529678116,1.4911955666024,0.151452386666368,0,0,1.72084775396277,0,0.539703191637817,0,0,0.140444420131752,0,0,0.35333957451034,0.704217098883403,0,0,0,0,0,0,0,0,0.148442139064825,0.520455980298408,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0.628332956648377,0,0,0,0.161766849947409,0,0,0,4.39171195517321,7.54008144528438,0,0.11981512450592,0.599902730993408,0,4.94309110035915,2.28750301409313,2.89005009859588,2.43354048269187,3.06858548796397,5.61027720310812,3.24482526135515,0.101839363850316,0,0.2527227584336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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:668158 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q6B2 | |||
|association_with_transcript=199bp_to_ENSMUST00000136175,NM_001159910,uc011yrs.1_5end | |||
|cluster_id=chr12:109513404..109513427,- | |||
|description=CAGE_peak_3_at_Ccdc85c_5end | |||
|id=chr12:109513404..109513427,- | |||
|ontology_enrichment_celltype=CL:0000117!9.46e-13!23;CL:0000337!9.46e-13!23;CL:0000540!1.69e-11!33;CL:0000047!1.69e-11!33;CL:0000031!1.69e-11!33;CL:0000404!1.69e-11!33;CL:0000221!3.78e-11!44;CL:0000133!3.78e-11!44;CL:0002319!8.08e-11!43;CL:0000055!1.90e-08!50;CL:0000393!4.19e-08!39;CL:0000211!4.19e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.31e-19,23;CL:0000337,1.31e-19,23;CL:0000540,1.21e-13,33;CL:0000047,1.21e-13,33;CL:0000031,1.21e-13,33;CL:0000404,1.21e-13,33;CL:0002319,9.88e-12,43;CL:0000221,2.43e-11,44;CL:0000133,2.43e-11,44;CL:0000393,8.81e-11,39;CL:0000211,8.81e-11,39;CL:0002614,8.99e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.17e-25!73;UBERON:0005743!7.17e-25!73;UBERON:0000073!1.26e-23!75;UBERON:0001016!1.26e-23!75;UBERON:0002346!1.72e-23!71;UBERON:0003075!1.72e-23!71;UBERON:0007284!1.72e-23!71;UBERON:0004121!5.51e-23!102;UBERON:0000924!5.51e-23!102;UBERON:0006601!5.51e-23!102;UBERON:0000033!5.50e-22!63;UBERON:0001049!1.31e-20!52;UBERON:0005068!1.31e-20!52;UBERON:0006241!1.31e-20!52;UBERON:0007135!1.31e-20!52;UBERON:0000955!2.43e-19!50;UBERON:0006238!2.43e-19!50;UBERON:0002616!1.11e-18!49;UBERON:0003056!2.01e-17!49;UBERON:0007811!1.08e-16!86;UBERON:0002020!3.11e-16!34;UBERON:0003080!6.05e-15!40;UBERON:0000153!1.88e-14!94;UBERON:0002780!3.03e-14!39;UBERON:0001890!3.03e-14!39;UBERON:0006240!3.03e-14!39;UBERON:0002791!3.21e-13!29;UBERON:0003528!3.21e-13!29;UBERON:0001893!3.21e-13!29;UBERON:0000956!1.47e-08!21;UBERON:0001869!1.47e-08!21;UBERON:0000203!1.47e-08!21;UBERON:0002619!3.14e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.01e-32,64;UBERON:0003075,2.01e-32,64;UBERON:0007284,2.01e-32,64;UBERON:0001017,2.79e-32,73;UBERON:0004121,1.60e-31,95;UBERON:0000924,1.60e-31,95;UBERON:0006601,1.60e-31,95;UBERON:0001016,3.96e-31,75;UBERON:0000073,1.29e-29,54;UBERON:0010371,3.86e-27,73;UBERON:0001049,5.11e-27,52;UBERON:0005068,5.11e-27,52;UBERON:0006241,5.11e-27,52;UBERON:0007135,5.11e-27,52;UBERON:0002020,8.64e-23,34;UBERON:0000955,1.33e-20,47;UBERON:0006238,1.33e-20,47;UBERON:0003056,2.31e-20,49;UBERON:0010314,2.12e-19,92;UBERON:0002616,2.48e-19,46;UBERON:0003528,2.74e-16,29;UBERON:0002791,2.74e-16,29;UBERON:0001893,2.74e-16,29;UBERON:0003080,2.50e-15,40;UBERON:0002780,4.82e-14,39;UBERON:0001890,4.82e-14,39;UBERON:0006240,4.82e-14,39;UBERON:0003076,1.36e-13,12;UBERON:0003057,1.36e-13,12;UBERON:0002420,5.11e-13,8;UBERON:0007245,5.11e-13,8;UBERON:0010009,5.11e-13,8;UBERON:0010011,5.11e-13,8;UBERON:0000454,5.11e-13,8;UBERON:0002240,3.03e-10,6;UBERON:0005174,3.03e-10,6;UBERON:0001137,3.03e-10,6;UBERON:0000025,3.78e-09,114;UBERON:0004111,1.22e-08,122;UBERON:0001948,1.27e-08,5;UBERON:0002315,1.27e-08,5;UBERON:0002950,1.52e-08,4;UBERON:0001891,1.52e-08,4;UBERON:0009616,1.52e-08,4;UBERON:0010286,1.52e-08,4;UBERON:0000369,6.86e-08,5;UBERON:0002435,6.86e-08,5;UBERON:0000204,6.86e-08,5;UBERON:0010082,6.86e-08,5;UBERON:0002619,1.27e-07,17;UBERON:0000956,3.96e-07,21;UBERON:0001869,3.96e-07,21;UBERON:0000203,3.96e-07,21;UBERON:0002021,5.31e-07,10;UBERON:0000411,5.31e-07,10;UBERON:0001950,5.31e-07,10;UBERON:0002038,8.99e-07,3;UBERON:0009663,8.99e-07,3;UBERON:0009661,8.99e-07,3;UBERON:0000125,8.99e-07,3;UBERON:0002308,8.99e-07,3;UBERON:0000483,9.38e-07,174 | |||
|phase1_expression=0.480446541314382,0,0.454999239389536,0.60492842261366,0,0.33575854382378,0,0,0,0.234064526321993,0.34243593645101,0.398860794976682,0,0,0.333109761815663,0,0,0,0,0,1.44573593256819,0.496454756004426,0.261199789138935,0.159992422793407,0,0,0.86152399231815,0.215471232685889,0,0.252030129759931,0,0.635030673459631,0,0,0.577703239502549,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.659058548203415,0.777719596297134,0,1.43752564364972,0,0,0,0,0,0.515672092277442,1.82084814773638,1.05798195854407,1.26766280701236,0,0.889294796111139,0,0,0,0.599200221036809,1.53687322128622,0.622137673850866,0.675029691658453,0.630974884054146,3.99911378165325,4.63823935998388,0.61245399607477,0.766763768145891,1.83843757322004,1.10115880999389,4.08599481872601,4.30098293117482,1.45074916503213,2.37867873366265,1.04182674111352,5.58365998002762,4.50210088025344,4.12555268997387,1.17851434189467,2.98980529678116,1.4911955666024,0.151452386666368,0,0,1.72084775396277,0,0.539703191637817,0,0,0.140444420131752,0,0,0.35333957451034,0.704217098883403,0,0,0,0,0,0,0,0,0.148442139064825,0.520455980298408,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0.628332956648377,0,0,0,0.161766849947409,0,0,0,4.39171195517321,7.54008144528438,0,0.11981512450592,0.599902730993408,0,4.94309110035915,2.28750301409313,2.89005009859588,2.43354048269187,3.06858548796397,5.61027720310812,3.24482526135515,0.101839363850316,0,0.252722758433675,0,0.130120442962704,0.919608417733892,1.98068342785884,1.05493372485001,3.26575195926374,2.8185018462667,2.62364828767241,1.81092359517311,0.431135985865684,0,0.351902248327898,0.657587197282725,0,0,0,0.199034266818493,0,0,0,0.414251545071004,0,0.36012412292203,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,0,0.729619285912702,0.292399974850665,0.219550115291051,0.805238512562231,2.73376933133365,1.85228302282712,0,0,0,0.464473343720877,0.128867461322093,0.605050573870028,0.22237804384487,0,0,0.658795818896044,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0.350679099451593,0.189709611372772,0,0.31399745568275,0.493588655687202,0,0.500535317148282,0,0,0.202860121388503,0,0,0.287696137450811,0,0,1.43768206527355,0,0,0,0.179397413521912,0.964887042726734,0.184753190166605,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0,0.585400943573396,0,0,0.159454768657487,0,0,0.289298117163023,0,0,0,0,4.33486592967038,1.99259867206745,0.327869890753351,0,0.631016438832513,1.17131623288992,0.215423397732799,0.955875191810208,0.222798674082394,0,0,0.584511715822624,0.395287777946524,3.21321316421807,0,0,0.651547837414304,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,1.22974059177571,0.258428293168221,0,0,0,0,1.03135543248187,0.340439605753788,0.540183282093931,0.517434735131018,0,0.532020700926821,0.178368817602071,0.822745103010605,0.608929898229199,0,0,0,0.49465875882444,0,0.180938774784468,0.238744688006273,0,0.291480836629851,4.07935664423121,0,0.206386867963223,0.185194527369712,0,0,0.228778173206523,0.339956859987711,0,0.138199973804424,0,0,0.406638934253697,0.216010681643603,0.209088296014469,0.218362563746178,0.404593039154462,0.247960367176008,0.26175594198403,0.388844919875379,0,3.38215763210514,0,0,0.194451188344048,0.258319646955462,0.337912250981556,0.117357238645754,0.13020438484395,0.419437377702843,0.724752362478018,0.576060012515731,0.316011120628178,0,0.102710957164827,0.51968329191118,0.179026695667481,0.79472541912506,0.360586348559907,0.886137163047463,0.504832249740738,0.381034033274999,0.302478555410522,0.194915761479505,0.0962118416403295,0.116876902181569,0.680191150845634,0.221985953374065,0.0897138566094757,0.335769232728157,0.386379188064381,0.375364950902364,0,0.643105137237198,1.00314420807073,0.564751842617067,2.76195141904306,2.86447756719698,1.89038500578056,3.42541259885321,0,0.675022500231806,1.35096360967266,1.35942722695261,1.03552062350364,0.103787347584177,0.399024873401031,0.682934423016537,0.486213434136588,0.209613162627982,0.367687016900028,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0.50695859978048,0,0.37456602987953,0.448176066834085,0.402048282689293,0.952587382566147,0.347652977834566,0.578727661391115,0,0,0,0.354951612318675,0,0.145346416632329,0.188218760830661,0.338458431566706,0.548783918618318,0.263069711437843,0.271608227691724,0,0.711810108745045,0.394017929502254,0.409231043169689,0,0.771626443924566,0.499621155875892,0,0.429742108096597,0.191288332068843,0.220591419119515,0 | |||
|short_description=p3@Ccdc85c | |||
}} |
Revision as of 16:18, 4 August 2015
Short description: | p3@Ccdc85c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ccdc85c_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 199bp_to_ENSMUST00000136175, NM_001159910, uc011yrs.1_5end |
EntrezGene: | 668158 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.31e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.31e-19 | 23 |
neuron | 1.21e-13 | 33 |
neuronal stem cell | 1.21e-13 | 33 |
neuroblast | 1.21e-13 | 33 |
electrically signaling cell | 1.21e-13 | 33 |
neural cell | 9.88e-12 | 43 |
ectodermal cell | 2.43e-11 | 44 |
neurectodermal cell | 2.43e-11 | 44 |
electrically responsive cell | 8.81e-11 | 39 |
electrically active cell | 8.81e-11 | 39 |
neuron of the substantia nigra | 8.99e-07 | 3 |