FFCP PHASE1:Mm9::chr11:78138175..78138191,+: Difference between revisions
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{{FFCP|EntrezGene=11676|HGNC=|MCL_coexpression_id=293|UniProt=|association_with_transcript=-375bp_to_ENSMUST00000124090_5end|description=CAGE_peak_9_at_Aldoc_5end|id=chr11:78138175..78138191,+|ontology_enrichment_celltype=CL:0000117!2.00e-08!23;CL:0000337!2.00e-08!23;CL:0002319!7.62e-08!43;CL:0000221!1.41e-07!44;CL:0000133!1.41e-07!44;CL:0002614!5.74e-07!3|ontology_enrichment_celltype_v019_2=CL:0000117,5.20e-12,23;CL:0000337,5.20e-12,23;CL:0002614,3.46e-10,3;CL:0002610,9.17e-10,3;CL:0002319,1.35e-09,43;CL:0000221,2.56e-09,44;CL:0000133,2.56e-09,44;CL:0002611,6.89e-08,2;CL:0000540,8.38e-08,33;CL:0000047,8.38e-08,33;CL:0000031,8.38e-08,33;CL:0000404,8.38e-08,33;CL:0002605,5.89e-07,2;CL:0002604,5.89e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.69e-35!52;UBERON:0005068!1.69e-35!52;UBERON:0006241!1.69e-35!52;UBERON:0007135!1.69e-35!52;UBERON:0001017!8.87e-32!73;UBERON:0005743!8.87e-32!73;UBERON:0000073!1.14e-30!75;UBERON:0001016!1.14e-30!75;UBERON:0002616!1.58e-30!49;UBERON:0000955!9.49e-30!50;UBERON:0006238!9.49e-30!50;UBERON:0002020!1.38e-26!34;UBERON:0002346!1.37e-23!71;UBERON:0003075!1.37e-23!71;UBERON:0007284!1.37e-23!71;UBERON:0000033!6.85e-22!63;UBERON:0004121!3.12e-21!102;UBERON:0000924!3.12e-21!102;UBERON:0006601!3.12e-21!102;UBERON:0003080!2.67e-19!40;UBERON:0002791!8.20e-19!29;UBERON:0003528!8.20e-19!29;UBERON:0001893!8.20e-19!29;UBERON:0003076!1.40e-18!12;UBERON:0003057!1.40e-18!12;UBERON:0002780!7.04e-18!39;UBERON:0001890!7.04e-18!39;UBERON:0006240!7.04e-18!39;UBERON:0002619!6.17e-16!17;UBERON:0003056!1.27e-14!49;UBERON:0000956!2.43e-14!21;UBERON:0001869!2.43e-14!21;UBERON:0000203!2.43e-14!21;UBERON:0002021!4.76e-14!10;UBERON:0000411!4.76e-14!10;UBERON:0001950!4.76e-14!10;UBERON:0007811!7.52e-14!86;UBERON:0002298!1.56e-12!6;UBERON:0000153!5.45e-12!94;UBERON:0002240!5.57e-12!6;UBERON:0005174!5.57e-12!6;UBERON:0001137!5.57e-12!6;UBERON:0000025!2.27e-11!114;UBERON:0004111!4.62e-10!122;UBERON:0001948!4.71e-10!5;UBERON:0002315!4.71e-10!5;UBERON:0002950!9.52e-09!4;UBERON:0001891!9.52e-09!4;UBERON:0009616!9.52e-09!4;UBERON:0004733!2.66e-08!6;UBERON:0004732!2.66e-08!6;UBERON:0002028!2.66e-08!6;UBERON:0007277!2.66e-08!6;UBERON:0002038!5.74e-07!3;UBERON:0002308!5.74e-07!3;UBERON:0009663!5.74e-07!3;UBERON:0009661!5.74e-07!3;UBERON:0006331!5.74e-07!3;UBERON:0000125!5.74e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.29e-39,54;UBERON:0001049,5.29e-35,52;UBERON:0005068,5.29e-35,52;UBERON:0006241,5.29e-35,52;UBERON:0007135,5.29e-35,52;UBERON:0001017,2.52e-30,73;UBERON:0001016,2.22e-29,75;UBERON:0002346,1.63e-27,64;UBERON:0003075,1.63e-27,64;UBERON:0007284,1.63e-27,64;UBERON:0003076,1.16e-24,12;UBERON:0003057,1.16e-24,12;UBERON:0002616,1.49e-24,46;UBERON:0000955,6.15e-24,47;UBERON:0006238,6.15e-24,47;UBERON:0010371,1.65e-23,73;UBERON:0002020,2.25e-22,34;UBERON:0004121,4.12e-22,95;UBERON:0000924,4.12e-22,95;UBERON:0006601,4.12e-22,95;UBERON:0010314,1.29e-17,92;UBERON:0002021,2.03e-17,10;UBERON:0000411,2.03e-17,10;UBERON:0001950,2.03e-17,10;UBERON:0003080,8.10e-16,40;UBERON:0002619,1.98e-15,17;UBERON:0003528,8.64e-15,29;UBERON:0002791,8.64e-15,29;UBERON:0001893,8.64e-15,29;UBERON:0002780,4.32e-14,39;UBERON:0001890,4.32e-14,39;UBERON:0006240,4.32e-14,39;UBERON:0002240,1.38e-13,6;UBERON:0005174,1.38e-13,6;UBERON:0001137,1.38e-13,6;UBERON:0000025,3.12e-13,114;UBERON:0002950,5.15e-13,4;UBERON:0001891,5.15e-13,4;UBERON:0009616,5.15e-13,4;UBERON:0010286,5.15e-13,4;UBERON:0004733,1.47e-12,6;UBERON:0004732,1.47e-12,6;UBERON:0002028,1.47e-12,6;UBERON:0007277,1.47e-12,6;UBERON:0003056,2.66e-12,49;UBERON:0000956,3.75e-12,21;UBERON:0001869,3.75e-12,21;UBERON:0000203,3.75e-12,21;UBERON:0004111,5.00e-12,122;UBERON:0001948,1.22e-10,5;UBERON:0002315,1.22e-10,5;UBERON:0002038,3.46e-10,3;UBERON:0009663,3.46e-10,3;UBERON:0009661,3.46e-10,3;UBERON:0000125,3.46e-10,3;UBERON:0002308,3.46e-10,3;UBERON:0004684,9.17e-10,3;UBERON:0002275,9.17e-10,3;UBERON:0011216,4.38e-08,194;UBERON:0002256,6.89e-08,2;UBERON:0001896,1.15e-07,2;UBERON:0002298,1.15e-07,2;UBERON:0005290,1.15e-07,2;UBERON:0010096,1.15e-07,2;UBERON:0002037,6.00e-07,4;UBERON:0002680,6.00e-07,4;UBERON:0001895,6.00e-07,4;UBERON:0010092,6.00e-07,4;UBERON:0006215,6.00e-07,4;UBERON:0000483,7.11e-07,174;UBERON:0000119,9.77e-07,176|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,1.97717564461025,1.74986909166855,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,10.2834354385369,8.61387309711293,0,0,0,1.10115880999389,3.83062014255563,2.76491759861238,0,0,0,5.30447698102624,1.68828783009504,3.97275444219706,1.76777151284201,2.27794689278565,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,2.30391377494801,0,0,0,0,2.54644086988199,0.457500602818626,0.125654352112864,0.695297280769106,1.02286182932132,1.87009240103604,1.46017136760982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,6.42202359951168,5.27452589664914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608929898229199,0,0,0,0,0,0,0,0,0,6.48988557036784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,1.38097570952153,1.14579102687879,1.3748254587495,0.685082519770642,1.5107877947794,2.70009000092722,0,1.35942722695261,1.55328093525546,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0.249810577937946,0,0,0,0,0.231867835620421|short_description=p9@Aldoc}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:11676 | |||
|HGNC= | |||
|MCL_coexpression_id=293 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-375bp_to_ENSMUST00000124090_5end | |||
|cluster_id=chr11:78138175..78138191,+ | |||
|description=CAGE_peak_9_at_Aldoc_5end | |||
|id=chr11:78138175..78138191,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.00e-08!23;CL:0000337!2.00e-08!23;CL:0002319!7.62e-08!43;CL:0000221!1.41e-07!44;CL:0000133!1.41e-07!44;CL:0002614!5.74e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.20e-12,23;CL:0000337,5.20e-12,23;CL:0002614,3.46e-10,3;CL:0002610,9.17e-10,3;CL:0002319,1.35e-09,43;CL:0000221,2.56e-09,44;CL:0000133,2.56e-09,44;CL:0002611,6.89e-08,2;CL:0000540,8.38e-08,33;CL:0000047,8.38e-08,33;CL:0000031,8.38e-08,33;CL:0000404,8.38e-08,33;CL:0002605,5.89e-07,2;CL:0002604,5.89e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.69e-35!52;UBERON:0005068!1.69e-35!52;UBERON:0006241!1.69e-35!52;UBERON:0007135!1.69e-35!52;UBERON:0001017!8.87e-32!73;UBERON:0005743!8.87e-32!73;UBERON:0000073!1.14e-30!75;UBERON:0001016!1.14e-30!75;UBERON:0002616!1.58e-30!49;UBERON:0000955!9.49e-30!50;UBERON:0006238!9.49e-30!50;UBERON:0002020!1.38e-26!34;UBERON:0002346!1.37e-23!71;UBERON:0003075!1.37e-23!71;UBERON:0007284!1.37e-23!71;UBERON:0000033!6.85e-22!63;UBERON:0004121!3.12e-21!102;UBERON:0000924!3.12e-21!102;UBERON:0006601!3.12e-21!102;UBERON:0003080!2.67e-19!40;UBERON:0002791!8.20e-19!29;UBERON:0003528!8.20e-19!29;UBERON:0001893!8.20e-19!29;UBERON:0003076!1.40e-18!12;UBERON:0003057!1.40e-18!12;UBERON:0002780!7.04e-18!39;UBERON:0001890!7.04e-18!39;UBERON:0006240!7.04e-18!39;UBERON:0002619!6.17e-16!17;UBERON:0003056!1.27e-14!49;UBERON:0000956!2.43e-14!21;UBERON:0001869!2.43e-14!21;UBERON:0000203!2.43e-14!21;UBERON:0002021!4.76e-14!10;UBERON:0000411!4.76e-14!10;UBERON:0001950!4.76e-14!10;UBERON:0007811!7.52e-14!86;UBERON:0002298!1.56e-12!6;UBERON:0000153!5.45e-12!94;UBERON:0002240!5.57e-12!6;UBERON:0005174!5.57e-12!6;UBERON:0001137!5.57e-12!6;UBERON:0000025!2.27e-11!114;UBERON:0004111!4.62e-10!122;UBERON:0001948!4.71e-10!5;UBERON:0002315!4.71e-10!5;UBERON:0002950!9.52e-09!4;UBERON:0001891!9.52e-09!4;UBERON:0009616!9.52e-09!4;UBERON:0004733!2.66e-08!6;UBERON:0004732!2.66e-08!6;UBERON:0002028!2.66e-08!6;UBERON:0007277!2.66e-08!6;UBERON:0002038!5.74e-07!3;UBERON:0002308!5.74e-07!3;UBERON:0009663!5.74e-07!3;UBERON:0009661!5.74e-07!3;UBERON:0006331!5.74e-07!3;UBERON:0000125!5.74e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.29e-39,54;UBERON:0001049,5.29e-35,52;UBERON:0005068,5.29e-35,52;UBERON:0006241,5.29e-35,52;UBERON:0007135,5.29e-35,52;UBERON:0001017,2.52e-30,73;UBERON:0001016,2.22e-29,75;UBERON:0002346,1.63e-27,64;UBERON:0003075,1.63e-27,64;UBERON:0007284,1.63e-27,64;UBERON:0003076,1.16e-24,12;UBERON:0003057,1.16e-24,12;UBERON:0002616,1.49e-24,46;UBERON:0000955,6.15e-24,47;UBERON:0006238,6.15e-24,47;UBERON:0010371,1.65e-23,73;UBERON:0002020,2.25e-22,34;UBERON:0004121,4.12e-22,95;UBERON:0000924,4.12e-22,95;UBERON:0006601,4.12e-22,95;UBERON:0010314,1.29e-17,92;UBERON:0002021,2.03e-17,10;UBERON:0000411,2.03e-17,10;UBERON:0001950,2.03e-17,10;UBERON:0003080,8.10e-16,40;UBERON:0002619,1.98e-15,17;UBERON:0003528,8.64e-15,29;UBERON:0002791,8.64e-15,29;UBERON:0001893,8.64e-15,29;UBERON:0002780,4.32e-14,39;UBERON:0001890,4.32e-14,39;UBERON:0006240,4.32e-14,39;UBERON:0002240,1.38e-13,6;UBERON:0005174,1.38e-13,6;UBERON:0001137,1.38e-13,6;UBERON:0000025,3.12e-13,114;UBERON:0002950,5.15e-13,4;UBERON:0001891,5.15e-13,4;UBERON:0009616,5.15e-13,4;UBERON:0010286,5.15e-13,4;UBERON:0004733,1.47e-12,6;UBERON:0004732,1.47e-12,6;UBERON:0002028,1.47e-12,6;UBERON:0007277,1.47e-12,6;UBERON:0003056,2.66e-12,49;UBERON:0000956,3.75e-12,21;UBERON:0001869,3.75e-12,21;UBERON:0000203,3.75e-12,21;UBERON:0004111,5.00e-12,122;UBERON:0001948,1.22e-10,5;UBERON:0002315,1.22e-10,5;UBERON:0002038,3.46e-10,3;UBERON:0009663,3.46e-10,3;UBERON:0009661,3.46e-10,3;UBERON:0000125,3.46e-10,3;UBERON:0002308,3.46e-10,3;UBERON:0004684,9.17e-10,3;UBERON:0002275,9.17e-10,3;UBERON:0011216,4.38e-08,194;UBERON:0002256,6.89e-08,2;UBERON:0001896,1.15e-07,2;UBERON:0002298,1.15e-07,2;UBERON:0005290,1.15e-07,2;UBERON:0010096,1.15e-07,2;UBERON:0002037,6.00e-07,4;UBERON:0002680,6.00e-07,4;UBERON:0001895,6.00e-07,4;UBERON:0010092,6.00e-07,4;UBERON:0006215,6.00e-07,4;UBERON:0000483,7.11e-07,174;UBERON:0000119,9.77e-07,176 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,1.97717564461025,1.74986909166855,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,10.2834354385369,8.61387309711293,0,0,0,1.10115880999389,3.83062014255563,2.76491759861238,0,0,0,5.30447698102624,1.68828783009504,3.97275444219706,1.76777151284201,2.27794689278565,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,2.30391377494801,0,0,0,0,2.54644086988199,0.457500602818626,0.125654352112864,0.695297280769106,1.02286182932132,1.87009240103604,1.46017136760982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,6.42202359951168,5.27452589664914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608929898229199,0,0,0,0,0,0,0,0,0,6.48988557036784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,1.38097570952153,1.14579102687879,1.3748254587495,0.685082519770642,1.5107877947794,2.70009000092722,0,1.35942722695261,1.55328093525546,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0.249810577937946,0,0,0,0,0.231867835620421 | |||
|short_description=p9@Aldoc | |||
}} |
Revision as of 01:43, 4 August 2015
Short description: | p9@Aldoc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Aldoc_5end |
Coexpression cluster: | MCL_coexpression_mm9:293 |
Association with transcript: | -375bp_to_ENSMUST00000124090_5end |
EntrezGene: | 11676 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.20e-12 | 23 |
neuroblast (sensu Vertebrata) | 5.20e-12 | 23 |
neuron of the substantia nigra | 3.46e-10 | 3 |
raphe nuclei neuron | 9.17e-10 | 3 |
neural cell | 1.35e-09 | 43 |
ectodermal cell | 2.56e-09 | 44 |
neurectodermal cell | 2.56e-09 | 44 |
neuron of the dorsal spinal cord | 6.89e-08 | 2 |
neuron | 8.38e-08 | 33 |
neuronal stem cell | 8.38e-08 | 33 |
neuroblast | 8.38e-08 | 33 |
electrically signaling cell | 8.38e-08 | 33 |
astrocyte of the cerebral cortex | 5.89e-07 | 2 |
astrocyte of the hippocampus | 5.89e-07 | 2 |