FFCP PHASE1:Mm9::chr11:69672225..69672239,-: Difference between revisions
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{{FFCP|EntrezGene=83813|HGNC=|MCL_coexpression_id=24|UniProt=Q99ML2,E9PWT8,Q5F2B4,Q3TJU8,Q5F2B5,A2A6Q4|association_with_transcript=0bp_to_ENSMUST00000001626,ENSMUST00000094063,ENSMUST00000108626,ENSMUST00000108631,NM_031880,uc007jsb.2,uc007jsc.2_5end|description=CAGE_peak_2_at_Tnk1_5end|id=chr11:69672225..69672239,-|ontology_enrichment_celltype=CL:0002563!3.64e-08!9;CL:0002251!3.64e-08!9;CL:0002076!9.57e-07!15|ontology_enrichment_celltype_v019_2=CL:0002563,2.06e-10,9;CL:0002251,2.06e-10,9;CL:0002076,2.24e-09,15;CL:0000066,2.88e-08,25;CL:0000239,9.23e-08,6;CL:0000677,9.23e-08,6;CL:0000584,9.23e-08,6;CL:0000223,3.94e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!5.02e-23!43;UBERON:0005409!2.32e-22!59;UBERON:0004119!1.26e-14!130;UBERON:0000925!1.26e-14!130;UBERON:0006595!1.26e-14!130;UBERON:0001007!1.62e-14!128;UBERON:0001555!1.62e-14!128;UBERON:0007026!1.62e-14!128;UBERON:0004921!2.21e-13!126;UBERON:0004185!2.21e-13!126;UBERON:0000344!3.80e-12!15;UBERON:0001242!1.06e-10!13;UBERON:0000060!1.06e-10!13;UBERON:0001262!1.06e-10!13;UBERON:0004786!1.06e-10!13;UBERON:0003350!3.64e-08!9;UBERON:0004808!3.64e-08!9;UBERON:0001277!3.64e-08!9;UBERON:0002108!1.10e-07!16;UBERON:0000485!1.96e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0005409,9.55e-24,47;UBERON:0000160,2.84e-23,31;UBERON:0000344,9.59e-16,15;UBERON:0001007,5.25e-15,116;UBERON:0001555,5.25e-15,116;UBERON:0007026,5.25e-15,116;UBERON:0004119,2.06e-14,118;UBERON:0000925,2.06e-14,118;UBERON:0006595,2.06e-14,118;UBERON:0001242,8.27e-14,13;UBERON:0001262,8.27e-14,13;UBERON:0004786,8.27e-14,13;UBERON:0004921,1.22e-13,114;UBERON:0003350,2.06e-10,9;UBERON:0004808,2.06e-10,9;UBERON:0001277,2.06e-10,9;UBERON:0000485,6.31e-08,11;UBERON:0004923,1.17e-07,24|phase1_expression=0.320297694209588,18.1467211972468,18.654968814971,38.7154190472742,26.5474736871564,7.55456723603504,12.8486952327539,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,7.03966660290989,8.25873411841812,9.18771142584032,7.32295393470427,5.817723282519,6.08074942260396,3.2763916868791,5.76499327703792,0,0,0,7.51014211353314,3.82339684324532,11.2293145944303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,3.76823835312181,0,0,0,0,0,0.983110940922263,0,0,0,0.563373679106722,0,0,0,7.79367747640371,6.08063677140237,3.0331466700887,1.48439043634778,0,0,0,0,0,0,0,0,0.988779870937496,0,0,0,0.220841518460394,0,7.45567044872489,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.995255764880744,8.59257378674494,1.89397670297827,0.130120442962704,0,0.540186389416048,0.30140963567143,0.272145996605311,0,0.187403449119458,1.03481348295606,0.431135985865684,0.756424320671277,0.175951124163949,0.657587197282725,0.556094498451196,1.74126083261083,1.64625709126355,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,11.8950761874167,3.70230793328962,0.426576501070468,1.16118335930219,2.57734922644187,3.63030344322017,4.66993892074228,2.28270751335071,4.2707615539006,2.63518327558417,1.75934646160189,2.18852119245266,2.53453313254856,3.59527763461689,4.97117514711797,2.98711909881551,0.948339504765408,0.456994050438915,0,0.407302655690628,0.775809948670503,1.40271639780637,0.948548056863859,0.885660887877613,0.941992367048249,1.35736880313981,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,1.66277871149944,0.189491411770485,2.28150967018836,1.52770577197669,1.17345124144251,2.1775813467436,2.61848004974615,2.34160377429359,0.788175720530955,0.664394068946325,0.797273843287435,1.3109065177259,1.38147985492716,2.4590339958857,0,0,6.39293554924747,4.13905119457099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0,0.651547837414304,1.31976098378028,3.98235415019888,1.45668381692989,0.906970670894253,2.07465587731488,3.54362271456927,3.07435147943927,4.13485269069154,2.54473610634254,0.712994756769443,3.47640433729398,1.05418608574999,4.12542172992747,4.76615448055303,1.44048875225048,2.45781499187234,1.07168517515796,1.59606210278046,0.891844088010353,0.822745103010605,0.304464949114599,0.469343416127421,0.42366414172764,4.41056796109924,6.10079135883476,5.8127193610526,2.47282992205439,2.02932984805332,1.31312719796049,1.7488850197791,0,0,0,0,0,0,0,0.169978429993855,0,0,6.68269432610579,1.10717597753397,2.64315307264903,2.70013352054503,2.71814784818809,2.18362563746178,2.15782954215713,2.56225712748541,1.83229159388821,4.14767914533737,2.4853572523477,0.56369293868419,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0.576060012515731,0,0.608175645870493,0.410843828659309,0.129920822977795,1.25318686967237,0.198681354781265,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.201652370273681,0,0,0,2.72076460338254,1.55390167361845,0,1.67884616364078,2.70465431645067,1.31377732815827,4.57879060668163,2.57242054894879,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0.512200817262403,0.729320151204882,0,0.919217542250071,0.666740183404846,0.824140228955577,1.92551525755089,1.01078884705519,1.01391719956096,0,0.468207537349412,0.89635213366817,0.574354689556133,0.476293691283074,1.15884325944855,0.578727661391115,2.06042950401653,1.91358596174717,1.37147700954166,0.532427418478012,0.715308569841963,0.726732083161643,0.846984423737976,0.761531471025089,0,0.789209134313529,0.679020569229309,0,0.830445126869219,0.985044823755635,0.818462086339379,0.77468420592983,1.54325288784913,0.749431733813838,1.63752125911786,1.50409737833809,0.57386499620653,0.220591419119515,0|short_description=p2@Tnk1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:83813 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q99ML2,uniprot:E9PWT8,uniprot:Q5F2B4,uniprot:Q3TJU8,uniprot:Q5F2B5,uniprot:A2A6Q4 | |||
|association_with_transcript=0bp_to_ENSMUST00000001626,ENSMUST00000094063,ENSMUST00000108626,ENSMUST00000108631,NM_031880,uc007jsb.2,uc007jsc.2_5end | |||
|cluster_id=chr11:69672225..69672239,- | |||
|description=CAGE_peak_2_at_Tnk1_5end | |||
|id=chr11:69672225..69672239,- | |||
|ontology_enrichment_celltype=CL:0002563!3.64e-08!9;CL:0002251!3.64e-08!9;CL:0002076!9.57e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.06e-10,9;CL:0002251,2.06e-10,9;CL:0002076,2.24e-09,15;CL:0000066,2.88e-08,25;CL:0000239,9.23e-08,6;CL:0000677,9.23e-08,6;CL:0000584,9.23e-08,6;CL:0000223,3.94e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.02e-23!43;UBERON:0005409!2.32e-22!59;UBERON:0004119!1.26e-14!130;UBERON:0000925!1.26e-14!130;UBERON:0006595!1.26e-14!130;UBERON:0001007!1.62e-14!128;UBERON:0001555!1.62e-14!128;UBERON:0007026!1.62e-14!128;UBERON:0004921!2.21e-13!126;UBERON:0004185!2.21e-13!126;UBERON:0000344!3.80e-12!15;UBERON:0001242!1.06e-10!13;UBERON:0000060!1.06e-10!13;UBERON:0001262!1.06e-10!13;UBERON:0004786!1.06e-10!13;UBERON:0003350!3.64e-08!9;UBERON:0004808!3.64e-08!9;UBERON:0001277!3.64e-08!9;UBERON:0002108!1.10e-07!16;UBERON:0000485!1.96e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,9.55e-24,47;UBERON:0000160,2.84e-23,31;UBERON:0000344,9.59e-16,15;UBERON:0001007,5.25e-15,116;UBERON:0001555,5.25e-15,116;UBERON:0007026,5.25e-15,116;UBERON:0004119,2.06e-14,118;UBERON:0000925,2.06e-14,118;UBERON:0006595,2.06e-14,118;UBERON:0001242,8.27e-14,13;UBERON:0001262,8.27e-14,13;UBERON:0004786,8.27e-14,13;UBERON:0004921,1.22e-13,114;UBERON:0003350,2.06e-10,9;UBERON:0004808,2.06e-10,9;UBERON:0001277,2.06e-10,9;UBERON:0000485,6.31e-08,11;UBERON:0004923,1.17e-07,24 | |||
|phase1_expression=0.320297694209588,18.1467211972468,18.654968814971,38.7154190472742,26.5474736871564,7.55456723603504,12.8486952327539,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,7.03966660290989,8.25873411841812,9.18771142584032,7.32295393470427,5.817723282519,6.08074942260396,3.2763916868791,5.76499327703792,0,0,0,7.51014211353314,3.82339684324532,11.2293145944303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,3.76823835312181,0,0,0,0,0,0.983110940922263,0,0,0,0.563373679106722,0,0,0,7.79367747640371,6.08063677140237,3.0331466700887,1.48439043634778,0,0,0,0,0,0,0,0,0.988779870937496,0,0,0,0.220841518460394,0,7.45567044872489,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.995255764880744,8.59257378674494,1.89397670297827,0.130120442962704,0,0.540186389416048,0.30140963567143,0.272145996605311,0,0.187403449119458,1.03481348295606,0.431135985865684,0.756424320671277,0.175951124163949,0.657587197282725,0.556094498451196,1.74126083261083,1.64625709126355,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,11.8950761874167,3.70230793328962,0.426576501070468,1.16118335930219,2.57734922644187,3.63030344322017,4.66993892074228,2.28270751335071,4.2707615539006,2.63518327558417,1.75934646160189,2.18852119245266,2.53453313254856,3.59527763461689,4.97117514711797,2.98711909881551,0.948339504765408,0.456994050438915,0,0.407302655690628,0.775809948670503,1.40271639780637,0.948548056863859,0.885660887877613,0.941992367048249,1.35736880313981,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,1.66277871149944,0.189491411770485,2.28150967018836,1.52770577197669,1.17345124144251,2.1775813467436,2.61848004974615,2.34160377429359,0.788175720530955,0.664394068946325,0.797273843287435,1.3109065177259,1.38147985492716,2.4590339958857,0,0,6.39293554924747,4.13905119457099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0,0.651547837414304,1.31976098378028,3.98235415019888,1.45668381692989,0.906970670894253,2.07465587731488,3.54362271456927,3.07435147943927,4.13485269069154,2.54473610634254,0.712994756769443,3.47640433729398,1.05418608574999,4.12542172992747,4.76615448055303,1.44048875225048,2.45781499187234,1.07168517515796,1.59606210278046,0.891844088010353,0.822745103010605,0.304464949114599,0.469343416127421,0.42366414172764,4.41056796109924,6.10079135883476,5.8127193610526,2.47282992205439,2.02932984805332,1.31312719796049,1.7488850197791,0,0,0,0,0,0,0,0.169978429993855,0,0,6.68269432610579,1.10717597753397,2.64315307264903,2.70013352054503,2.71814784818809,2.18362563746178,2.15782954215713,2.56225712748541,1.83229159388821,4.14767914533737,2.4853572523477,0.56369293868419,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0.576060012515731,0,0.608175645870493,0.410843828659309,0.129920822977795,1.25318686967237,0.198681354781265,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.201652370273681,0,0,0,2.72076460338254,1.55390167361845,0,1.67884616364078,2.70465431645067,1.31377732815827,4.57879060668163,2.57242054894879,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0.512200817262403,0.729320151204882,0,0.919217542250071,0.666740183404846,0.824140228955577,1.92551525755089,1.01078884705519,1.01391719956096,0,0.468207537349412,0.89635213366817,0.574354689556133,0.476293691283074,1.15884325944855,0.578727661391115,2.06042950401653,1.91358596174717,1.37147700954166,0.532427418478012,0.715308569841963,0.726732083161643,0.846984423737976,0.761531471025089,0,0.789209134313529,0.679020569229309,0,0.830445126869219,0.985044823755635,0.818462086339379,0.77468420592983,1.54325288784913,0.749431733813838,1.63752125911786,1.50409737833809,0.57386499620653,0.220591419119515,0 | |||
|short_description=p2@Tnk1 | |||
}} |
Revision as of 19:48, 3 August 2015
Short description: | p2@Tnk1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tnk1_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000001626, ENSMUST00000094063, ENSMUST00000108626, ENSMUST00000108631, NM_031880, uc007jsb.2, uc007jsc.2_5end |
EntrezGene: | 83813 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.06e-10 | 9 |
epithelial cell of alimentary canal | 2.06e-10 | 9 |
endo-epithelial cell | 2.24e-09 | 15 |
epithelial cell | 2.88e-08 | 25 |
brush border epithelial cell | 9.23e-08 | 6 |
gut absorptive cell | 9.23e-08 | 6 |
enterocyte | 9.23e-08 | 6 |
endodermal cell | 3.94e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 9.55e-24 | 47 |
intestine | 2.84e-23 | 31 |
mucosa | 9.59e-16 | 15 |
digestive system | 5.25e-15 | 116 |
digestive tract | 5.25e-15 | 116 |
primitive gut | 5.25e-15 | 116 |
endoderm-derived structure | 2.06e-14 | 118 |
endoderm | 2.06e-14 | 118 |
presumptive endoderm | 2.06e-14 | 118 |
intestinal mucosa | 8.27e-14 | 13 |
wall of intestine | 8.27e-14 | 13 |
gastrointestinal system mucosa | 8.27e-14 | 13 |
subdivision of digestive tract | 1.22e-13 | 114 |
epithelium of mucosa | 2.06e-10 | 9 |
gastrointestinal system epithelium | 2.06e-10 | 9 |
intestinal epithelium | 2.06e-10 | 9 |
simple columnar epithelium | 6.31e-08 | 11 |
organ component layer | 1.17e-07 | 24 |