FFCP PHASE1:Hg19::chr2:74146666..74146687,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2358 | |||
|description=CAGE_peak_at_chr2:74146666..74146687,+ | |||
|id=chr2:74146666..74146687,+ | |||
|ontology_enrichment_celltype=CL:0002594!6.32e-12!4;CL:0002622!5.35e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0002594;3.64e-18;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002594,4.75e-18,4 | |||
|ontology_enrichment_development_v019=UBERON:0000358;7.97e-10;1!UBERON:0005754;1.11e-09;1!UBERON:0004874;1.49e-09;1!UBERON:0009143;1.99e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001046!2.76e-13!19;UBERON:0001310!6.32e-12!4;UBERON:0000162!7.83e-12!14;UBERON:0001353!7.83e-12!14;UBERON:0000163!7.83e-12!14;UBERON:0006866!7.83e-12!14;UBERON:0000164!7.83e-12!14;UBERON:0000931!7.83e-12!14;UBERON:0003101!3.19e-11!22;UBERON:0000079!3.19e-11!22;UBERON:0005156!3.57e-11!59;UBERON:0000990!3.57e-11!59;UBERON:0004122!6.03e-11!15;UBERON:0003937!1.03e-10!12;UBERON:0005399!1.03e-10!12;UBERON:0006947!5.97e-10!3;UBERON:0004054!5.97e-10!3;UBERON:0004921!1.37e-09!129;UBERON:0004185!1.37e-09!129;UBERON:0000059!4.33e-09!11;UBERON:0002367!1.42e-08!11;UBERON:0010147!1.42e-08!11;UBERON:0009846!1.42e-08!11;UBERON:0003353!1.42e-08!11;UBERON:0004902!1.42e-08!11;UBERON:0003820!1.42e-08!11;UBERON:0009847!1.42e-08!11;UBERON:0000160!2.00e-08!27;UBERON:0001007!2.32e-08!155;UBERON:0001555!2.32e-08!155;UBERON:0007026!2.32e-08!155;UBERON:0001155!7.62e-08!9;UBERON:0005904!1.54e-07!4;UBERON:0005409!1.60e-07!35;UBERON:0003064!3.50e-07!37;UBERON:0004119!4.19e-07!169;UBERON:0000925!4.19e-07!169;UBERON:0006595!4.19e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001310;3.64e-18;4!UBERON:0005409;2.86e-12;22!UBERON:0006947;5.56e-12;3!UBERON:0004054;5.56e-12;3!UBERON:0000160;3.74e-11;17!UBERON:0004921;2.65e-10;33!UBERON:0000998;1.11e-09;1!UBERON:0006868;1.11e-09;1!UBERON:0001000;1.49e-09;1!UBERON:0000989;1.49e-09;1!UBERON:0008811;1.49e-09;1!UBERON:0005352;1.49e-09;1!UBERON:0004175;2.26e-09;21!UBERON:0005904;3.33e-09;4!UBERON:0005795;3.67e-09;1!UBERON:0006834;3.67e-09;1!UBERON:0000996;3.67e-09;1!UBERON:0010260;2.23e-08;9!UBERON:0003135;2.83e-07;11!UBERON:0000059;3.35e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001310,4.75e-18,4;UBERON:0006947,5.72e-12,3;UBERON:0004054,5.72e-12,3;UBERON:0000160,3.63e-11,17;UBERON:0005409,8.18e-11,25;UBERON:0000998,1.12e-09,1;UBERON:0006868,1.12e-09,1;UBERON:0000989,1.32e-09,1;UBERON:0008811,1.32e-09,1;UBERON:0006258,1.32e-09,1;UBERON:0005876,1.32e-09,1;UBERON:0004874,1.32e-09,1;UBERON:0001000,1.56e-09,1;UBERON:0005352,1.56e-09,1;UBERON:0006834,2.55e-09,1;UBERON:0005904,3.40e-09,4;UBERON:0000996,4.15e-09,1;UBERON:0010260,2.50e-08,9;UBERON:0004175,7.66e-08,25;UBERON:0005156,1.52e-07,59;UBERON:0000990,1.52e-07,59;UBERON:0003133,2.31e-07,48;UBERON:0003135,2.77e-07,11;UBERON:0000059,3.08e-07,11;UBERON:0003064,4.75e-07,28;UBERON:0001046,5.78e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0,0,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574072240823034,0.364182336013434,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0.409499734223957,0.282810863907425,0,0,0,0,0,0,1.42037263873893,1.239293992399,0.281695602532241,0,0,1.426684205925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0.828851746593443,0,0.102268682502155,0,0,0,0,0,6.31317796076375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815439456455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.707660516026713,4.27721101453538,0,0,0,0,0,0,0,0,0,4.3404284313433,4.83962864194656,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,3.006659511141,0,0.451961481561065,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5652351854352,0.150257608997218,0,0,0.181848659202559,0,0.464033759878494,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,2.1437183414724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46590060550365,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25588948560822,0,0,9.13158720509496,0,0,0,0,0,0,1.60342272946051,0,0,0,0,0,0,5.08064460229115,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.231522474323834,0.655678681511872,0,7.59959797437107,0,0,0,0,0,0,0,0,0,0,0,4.3820183294791,0,0,0,0,0,4.2322147241232,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0.332660356546013,0,0,0,0,11.7320471201727,1.95586310692586,1.62758471326295,1.33151354837103,0.201273793591026,0 | |||
|short_description=p@chr2:74146666..74146687,+ | |||
}} |
Revision as of 03:56, 21 January 2014
Short description: | p@chr2:74146666..74146687, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:74146666..74146687, + |
Coexpression cluster: | C2358_umbilical_ductus_rectum_stomach_smooth_bladder_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical artery | 4.75e-18 | 4 |
Ontology term | p-value | n |
---|---|---|
umbilical artery | 4.75e-18 | 4 |
male genital duct | 5.72e-12 | 3 |
internal male genitalia | 5.72e-12 | 3 |
intestine | 3.63e-11 | 17 |
gastrointestinal system | 8.18e-11 | 25 |
seminal vesicle | 1.12e-09 | 1 |
seminal fluid secreting gland | 1.12e-09 | 1 |
penis | 1.32e-09 | 1 |
intromittent organ | 1.32e-09 | 1 |
lateral plate mesenchyme | 1.32e-09 | 1 |
undifferentiated genital tubercle | 1.32e-09 | 1 |
somatopleure | 1.32e-09 | 1 |
vas deferens | 1.56e-09 | 1 |
spermatic cord | 1.56e-09 | 1 |
uterus or analog | 2.55e-09 | 1 |
duct of male reproductive system | 3.40e-09 | 4 |
vagina | 4.15e-09 | 1 |
umbilical blood vessel | 2.50e-08 | 9 |
internal genitalia | 7.66e-08 | 25 |
reproductive structure | 1.52e-07 | 59 |
reproductive system | 1.52e-07 | 59 |
reproductive organ | 2.31e-07 | 48 |
male reproductive organ | 2.77e-07 | 11 |
large intestine | 3.08e-07 | 11 |
intermediate mesoderm | 4.75e-07 | 28 |
hindgut | 5.78e-07 | 19 |