FFCP PHASE1:Hg19::chr2:71681010..71681037,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8291 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3097 | |||
|TSSclassifier=weak | |||
|UniProt=O75923 | |||
|association_with_transcript=158bp_to_ENST00000258104,ENST00000409582,ENST00000409762,ENST00000413539,ENST00000429174_5end | |||
|coexpression_cluster_id=C134 | |||
|description=CAGE_peak_7_at_DYSF_5end | |||
|id=chr2:71681010..71681037,+ | |||
|ontology_enrichment_celltype=CL:0000115!1.41e-18!35;CL:0002139!2.02e-18!24;CL:0002078!7.04e-15!44;CL:0000071!1.47e-14!18;CL:0002546!1.47e-14!18;CL:0002057!1.39e-12!42;CL:0000860!6.53e-11!45;CL:0000213!7.27e-11!57;CL:0000215!7.27e-11!57;CL:0002194!4.15e-10!63;CL:0000576!4.15e-10!63;CL:0000040!4.15e-10!63;CL:0000559!4.15e-10!63;CL:0000766!7.16e-10!76;CL:0002009!2.24e-09!65;CL:1000413!2.65e-08!9;CL:0000839!3.02e-08!70;CL:0000557!1.74e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.68e-33;24!CL:0000115;4.15e-28;36!CL:0000071;1.08e-27;18!CL:0002078;4.71e-19;45!CL:1000413;1.49e-13;9!CL:0000213;2.04e-12;58!CL:0000215;2.04e-12;58!CL:0002543;1.04e-10;6!CL:0002544;6.15e-09;6!CL:0000860;5.19e-08;33!CL:0002057;5.19e-08;33!CL:0002138;1.61e-07;6!CL:0000473;3.03e-07;39!CL:0000234;3.03e-07;39!CL:0002144;9.53e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.44e-34,36;CL:0002139,1.17e-33,24;CL:0002078,6.57e-28,45;CL:0000071,8.01e-28,18;CL:0002546,8.01e-28,18;CL:0000213,3.23e-18,58;CL:0000215,3.23e-18,58;CL:1000413,8.59e-14,9;CL:0002543,1.21e-10,6;CL:0000860,2.53e-09,42;CL:0002057,2.53e-09,42;CL:0002544,4.94e-09,6;CL:0000473,9.53e-09,48;CL:0000234,9.53e-09,48;CL:0000222,9.57e-09,121;CL:0005020,1.51e-07,6;CL:0002138,1.51e-07,6;CL:0005022,1.51e-07,6;CL:0002194,7.17e-07,59;CL:0000576,7.17e-07,59;CL:0000040,7.17e-07,59;CL:0000559,7.17e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002546;1.08e-27;18!CL:0002057;1.53e-08;42!CL:0005022;1.61e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.29e-17!115;UBERON:0003081!6.03e-15!216;UBERON:0001986!1.47e-14!18;UBERON:0004638!1.47e-14!18;UBERON:0004852!1.47e-14!18;UBERON:0001009!1.77e-13!113;UBERON:0004535!4.79e-12!110;UBERON:0000487!7.69e-12!22;UBERON:0002049!4.07e-11!79;UBERON:0007798!4.07e-11!79;UBERON:0000467!4.83e-11!625;UBERON:0000480!6.58e-11!626;UBERON:0000468!8.33e-11!659;UBERON:0006914!3.34e-10!25;UBERON:0000055!6.53e-10!69;UBERON:0000922!7.54e-10!612;UBERON:0004111!1.39e-09!241;UBERON:0000025!6.70e-09!194;UBERON:0003914!1.33e-08!118;UBERON:0000477!1.83e-08!286;UBERON:0002193!2.04e-08!112;UBERON:0003915!2.65e-08!9;UBERON:0004700!2.65e-08!9;UBERON:0001917!2.65e-08!9;UBERON:0000923!2.66e-08!604;UBERON:0005291!2.66e-08!604;UBERON:0006598!2.66e-08!604;UBERON:0002532!2.66e-08!604;UBERON:0001981!2.89e-08!60;UBERON:0007500!2.89e-08!60;UBERON:0004537!2.89e-08!60;UBERON:0006965!2.89e-08!60;UBERON:0002050!3.48e-08!605;UBERON:0005423!3.48e-08!605;UBERON:0002405!6.55e-08!115;UBERON:0004872!8.79e-08!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.08e-27;18!UBERON:0001986;1.08e-27;18!UBERON:0004852;1.08e-27;18!UBERON:0000487;2.14e-24;22!UBERON:0006914;7.96e-21;25!UBERON:0003915;1.49e-13;9!UBERON:0004700;1.49e-13;9!UBERON:0001917;1.49e-13;9!UBERON:0000490;3.59e-13;33!UBERON:0000055;2.03e-07;65!UBERON:0004151;5.16e-07;3!UBERON:0001638;7.12e-07;9!UBERON:0003920;7.12e-07;9!UBERON:0004582;7.12e-07;9!UBERON:0001009;9.37e-07;112!UBERON:0010523;9.53e-07;3!UBERON:0001915;9.53e-07;3!UBERON:0001982;9.53e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.01e-28,18;UBERON:0001986,8.01e-28,18;UBERON:0004852,8.01e-28,18;UBERON:0000487,2.55e-24,22;UBERON:0006914,9.26e-21,25;UBERON:0003081,5.92e-17,203;UBERON:0000055,6.37e-17,68;UBERON:0001009,6.60e-16,112;UBERON:0002049,9.70e-15,78;UBERON:0007798,9.70e-15,78;UBERON:0003914,6.05e-14,117;UBERON:0003915,8.59e-14,9;UBERON:0004700,8.59e-14,9;UBERON:0001917,8.59e-14,9;UBERON:0007500,1.41e-13,59;UBERON:0001981,1.41e-13,59;UBERON:0004537,1.41e-13,59;UBERON:0006965,1.41e-13,59;UBERON:0004535,1.89e-13,109;UBERON:0004872,2.15e-12,83;UBERON:0000926,1.03e-11,315;UBERON:0004120,1.03e-11,315;UBERON:0006603,1.03e-11,315;UBERON:0004111,1.32e-09,240;UBERON:0000058,5.95e-08,19;UBERON:0004876,9.41e-08,11;UBERON:0000025,3.72e-07,192;UBERON:0000080,3.73e-07,9;UBERON:0002120,3.73e-07,9;UBERON:0004875,3.73e-07,9;UBERON:0005721,3.73e-07,9;UBERON:0005754,3.73e-07,9;UBERON:0007297,3.73e-07,9;UBERON:0004151,4.88e-07,3;UBERON:0003103,6.32e-07,68;UBERON:0001638,7.82e-07,9;UBERON:0003920,7.82e-07,9;UBERON:0004582,7.82e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0.527533956456907,0,0,0,1.80808358407193,0,0.487932798790507,0.246242116153576,1.63200552995402,0.626909442956176,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.619264493264304,0,0,0.369754010166788,0,0,0,1.66198622559563,1.00272223735071,1.08505435357926,0.895661896959697,0,1.03030227053675,2.32637182047304,1.88937971844405,0.242584061187816,1.39457422143411,0.822335776043652,0.619412741790207,1.7261543539329,0.512321413058201,0.236482229888585,1.37898272294647,1.29096936716765,0,1.88242339542605,0.818718450173537,0.224723484445085,0.612167784741805,0.641858054152187,0.639337125799041,2.30895910130701,0.797854630486527,0.426224750532694,1.7412554317715,1.70215567407342,1.86846674698672,0.251248665256743,0.521482918420201,1.08594422352558,3.02699751316684,0,0.316462387440884,0,0,0,1.01095768031846,0.450530678524519,1.44653028027372,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.665188192387692,0.527008714158756,0.261958150995425,0,0,0.649094787309367,0.522389211897802,0.398873881556595,0,0,0,2.78267370313387,3.4409383804245,2.77712401286075,3.95715559346807,3.77549492588915,1.92582629358047,1.25396979922086,1.55050055501597,3.20189636418039,1.33888245105868,2.01414658554573,1.52054421143703,5.36936526605973,4.04429388380456,0.81014194788176,1.16089646769304,2.2452937262617,1.35133776579987,1.53316637465883,2.84779697870439,1.46561395144326,0,3.87780264148325,0,0,0,0.926864265692532,0,0,0,1.06748995729705,1.2333377420858,0.622422070799533,0.134710672069688,0.490385709340376,0.908144565869588,0.576175924479999,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,1.54608682530637,0,0,0.243947412259191,0.397589304964456,0.232387885739037,0.621966330092223,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42893272774789,1.40241773803446,0.4115740113314,2.94017422771084,0,0.982827216677626,0,0,0,0.514703430895577,0.548751427043128,0,0,0.370353780634118,0,0,0,0,0.587043471179108,1.15493158208859,0.925971025153221,1.71228737011138,0,0,0,0,0,0.93733833986777,0.503946384596579,0.567100388969546,0.447792613514241,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560655421726804,1.74384027533312,0.1466765716419,0.258543431515556,0,0,0,0,0.771622122786426,0,0,0,0,0,0,0,0,0.602878754119172,0,0,2.43247561282381,0.502257091432126,0,0,0,0,0.289562613335158,0,0.537182889719687,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0.749007023947182,0,8.28831026872071,0,0,0,1.45579603071565,0.178428988797162,0,0.468565659970853,0,0,0,0,0.184369168541703,0,0.195801157462741,4.46086450954113,0.413536052245775,0.431428401637234,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,1.60405176242628,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0.211103257785751,2.27466768141793,2.72149928442425,0.863663664408557,1.54227252690289,0.812839312631559,2.50844886927427,0,0,0.671624264166535,0,0.261435451024901,0,0.328014645699706,0.650756789328606,0.618246069886334,0,0,1.14853107599234,0,0,2.03008508413456,0,0,0.137836572484531,0,0.435050081742686,0.340906509664404,1.60257664164127,0,0,0.510450849978337,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0,1.116475108079,0,0.38126038784765,0,0,0,1.56989728039846,0,0,0,0.202182481573316,0,0.842516912477962,0,0,0,0,0,0,0,0,0,0,0,0.608731130888112,0.30982349809975,0.845086807596724,0,0,0,0,0,0,0,0,0.48111056362756,0,0,0.282431402330337,0.86101074534246,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0.238231775457789,0.411362273086194,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,2.75175657541048,0.973865820823666,0,0,0,0,0,0,0,2.98092366383228,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,1.39473591775749,0.828851746593443,0,0,0,0,0,0,0,1.38100767891707,2.3948309234694,0,0,0,0,0,0,0,0,1.01701460117107,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0.219385397153973,0,0,0.615602068030377,0,0,0,0.651884231532048,0,0,0,0,0,0.498635045700469,0,0,0,0.569261198172555,0,0,0,0,0,1.99052386215701,0.619202951523374,0,0,0,0,0.067401132980677,12.8412423567806,0.234264445725339,0,0.19566461893209,0,1.57833761139756,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0.171986032471617,0,0,0,0.678923115418936,0,0.677942222341597,0,0,0.316553979779393,0,0,0.640358984218058,0.39961921916426,0,0,0,0,0,0.235694034616795,0,0,0,0,0.600420288709789,0.547621515567972,0,1.28929632425987,0,1.39641200636127,2.52076466412852,1.43574604915363,2.1964690054889,5.57993862577542,1.11585728720936,0.604651252380536,2.16179930125442,1.16495949527454,0,0,0,0,0,0,0.272406812223151,0.964518890790115,0.275078873194468,0.415440338029185,0,0,0.303747783290123,0,0.472834243795189,0.209818352539992,0.105600336519406,0,0.191915197319445,7.86164859010704,5.95882773328889,0,0,0,0,0,0,0,0,0.146552233678082,2.65013777824443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| |||
|short_description=p7@DYSF | |||
}} |
Revision as of 03:51, 21 January 2014
Short description: | p7@DYSF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_DYSF_5end |
Coexpression cluster: | C134_skeletal_diaphragm_tongue_throat_Skeletal_skin_penis |
Association with transcript: | 158bp_to_ENST00000258104, ENST00000409582, ENST00000409762, ENST00000413539, ENST00000429174_5end |
EntrezGene: | DYSF |
HGNC: | 3097 |
UniProt: | O75923 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.44e-34 | 36 |
endothelial cell of vascular tree | 1.17e-33 | 24 |
meso-epithelial cell | 6.57e-28 | 45 |
blood vessel endothelial cell | 8.01e-28 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.01e-28 | 18 |
lining cell | 3.23e-18 | 58 |
barrier cell | 3.23e-18 | 58 |
endothelial cell of artery | 8.59e-14 | 9 |
vein endothelial cell | 1.21e-10 | 6 |
classical monocyte | 2.53e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.53e-09 | 42 |
aortic endothelial cell | 4.94e-09 | 6 |
defensive cell | 9.53e-09 | 48 |
phagocyte | 9.53e-09 | 48 |
mesodermal cell | 9.57e-09 | 121 |
lymphangioblast | 1.51e-07 | 6 |
endothelial cell of lymphatic vessel | 1.51e-07 | 6 |
vascular lymphangioblast | 1.51e-07 | 6 |
monopoietic cell | 7.17e-07 | 59 |
monocyte | 7.17e-07 | 59 |
monoblast | 7.17e-07 | 59 |
promonocyte | 7.17e-07 | 59 |