FFCP PHASE1:Mm9::chr11:35582876..35582906,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=211347|HGNC=|MCL_coexpression_id=12|UniProt=Q8R2W9|association_with_transcript=-79bp_to_ENSMUST00000018990_5end|description=CAGE_peak_6_at_Pank3_5end|id=chr11:35582876..35582906,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,7.02e-10,9;CL:0002251,7.02e-10,9;CL:0000239,1.58e-09,6;CL:0000677,1.58e-09,6;CL:0000584,1.58e-09,6;CL:0000066,3.83e-09,25;CL:0002076,6.53e-09,15;CL:0000075,5.52e-08,7;CL:0000223,2.43e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!9.49e-15!130;UBERON:0000925!9.49e-15!130;UBERON:0006595!9.49e-15!130;UBERON:0001007!5.82e-14!128;UBERON:0001555!5.82e-14!128;UBERON:0007026!5.82e-14!128;UBERON:0005409!2.72e-13!59;UBERON:0004921!5.33e-13!126;UBERON:0004185!5.33e-13!126;UBERON:0004923!1.78e-12!24;UBERON:0000160!2.09e-10!43;UBERON:0000344!2.13e-10!15;UBERON:0001242!2.74e-09!13;UBERON:0000060!2.74e-09!13;UBERON:0001262!2.74e-09!13;UBERON:0004786!2.74e-09!13;UBERON:0002365!5.05e-07!25;UBERON:0002330!5.05e-07!25|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.67e-22,31;UBERON:0005409,4.87e-20,47;UBERON:0004119,3.03e-18,118;UBERON:0000925,3.03e-18,118;UBERON:0006595,3.03e-18,118;UBERON:0000344,1.57e-17,15;UBERON:0001007,6.16e-17,116;UBERON:0001555,6.16e-17,116;UBERON:0007026,6.16e-17,116;UBERON:0004923,2.29e-15,24;UBERON:0004921,2.35e-15,114;UBERON:0001242,2.88e-15,13;UBERON:0001262,2.88e-15,13;UBERON:0004786,2.88e-15,13;UBERON:0003350,7.02e-10,9;UBERON:0004808,7.02e-10,9;UBERON:0001277,7.02e-10,9;UBERON:0002365,6.03e-08,25;UBERON:0002330,6.03e-08,25;UBERON:0000485,9.97e-08,11;UBERON:0007023,6.79e-07,51;UBERON:0002108,7.66e-07,4|phase1_expression=0.160148847104794,4.88565570695105,7.27998783023258,2.41971369045464,3.50627010962443,2.68606835059024,3.73780224952841,0,0.281577444303333,0,0,0.239316476986009,0,0,0,1.61980213911861,1.39912375625629,0,0,0,0.0850432901510698,0.297872853602656,0,2.55987876469451,1.60586496747019,1.72269589234506,4.73838195774982,3.878482188346,4.3705386474966,5.04060259519861,2.43903561720835,0,0,0,1.44425809875637,0.997407872150954,1.83752420636132,0.837063261473815,2.3440060335714,0,0,0,0.971020706062307,0.125896817975577,0.202753862439029,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0,0,0,0.889294796111139,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0,0,0.0914876436024097,0,0,0,0.30559649555362,0,0.142371680799103,0,0.984440513331393,0.831287161174641,0,0,0.679971333707751,0.539703191637817,0.649776417447669,2.24013443548668,0.421333260395256,0.340860645156116,0.259786004602869,0,0.14084341977668,1.28326477414318,0,0,0.865964164044856,1.01343946190039,1.01104889002957,1.48439043634778,0,0.29688427812965,0.346970653532272,0,0.461230994512117,0.753613202763113,0.23517741427141,0.125666591329675,0.494389935468748,0.578397427679647,0,0.485300549842228,0,0.484875253135222,1.86391761218122,0.292780797011547,0,2.04365644166873,0,0,0.381210681219194,0.149790639404823,0,0,0,0.255715457330331,0,0.162241263067758,0.101839363850316,0.497627882440372,0.252722758433675,1.68353484709179,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0,0.517406741478031,0.215567992932842,0.567318240503458,0.175951124163949,0.43839146485515,0.278047249225598,0.696504333044333,0.411564272815887,0,0,0.51469581422943,0.284163499395593,0.207125772535502,0.234526059981096,0.180062061461015,0,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.233530684734339,0,0,0.0810688095458557,0,0,0,0,0.102904612379284,5.94753809370836,5.02456076660734,0,0.232236671860439,0.644337306610467,0.605050573870028,0.889512175379481,1.14135375667535,0.949058123089023,2.14108641141214,2.76468729680296,1.59165177632921,2.53453313254856,4.49409704327111,3.02593269824572,1.59313018603494,0,0.114248512609729,1.1270773567308,0.203651327845314,0,0.210407459670956,0.0632365371242573,0.442830443938806,0.470996183524124,0,1.1858105083486,1.50160595144485,1.76903095601883,1.34917267430912,1.42002084971952,1.4470629585145,2.29163266603278,1.43848068725405,0.648540907100142,0.274561413188081,5.75072826109418,1.86070473834252,0.624075346229121,1.01031551178845,0.358794827043824,0.482443521363367,0.369506380333209,0.37898282354097,0.162964976442026,0.169745085775188,0,0.167506257441816,0.714130922658041,0,0.157635144106191,0,0.637819074629948,0.491589944147214,0.345369963731791,0.289298117163023,1.50791283939272,0,1.96705709207614,2.48343071674259,0.160550589987792,0,0.655739781506702,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0.292255857911312,0,0,0.283880170416537,0.35613120733451,0.162886959353576,0.329940245945071,0,0.485561272309963,0.906970670894253,0,0,0,0,0,0,1.26414703174326,1.05418608574999,1.03135543248187,0,0,0,0,0.354680467284547,0,0,0,1.17335854031855,1.27099242518292,0.220528398054962,1.31909002353184,0.322928853391811,0.663442174209714,0.477489376012546,0.656563598980245,2.91480836629851,0.18542530201051,1.53783792718067,0.82554747185289,0.555583582109135,0.753473828018764,1.50363650493128,0.686334519619568,0.169978429993855,0.139951452323658,0,0,0.316335993581135,0.203319467126849,0.972048067396211,0.209088296014469,1.31017538247707,0.674321731924103,1.1571483801547,1.57053565190418,1.94422459937689,1.24267862617385,0,0,0.165458490457098,0.388902376688095,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.629156066554265,1.44950472495604,1.15212002503146,0.316011120628178,0.405450430580328,0.205421914329655,0.25984164595559,0,0,0.360586348559907,0.147689527174577,0.302899349844443,0,0.100826185136841,0,0.0962118416403295,0.116876902181569,2.0405734525369,0.221985953374065,1.07656627931371,0.167884616364078,0.19318959403219,0.750729901804728,1.09890974560359,1.71494703263253,1.00314420807073,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0.170733605754134,0.729320151204882,0.628839487883947,0.367687016900028,0.222246727801615,0,0,0.758091635291392,0,0.565879024158229,0.561849044819294,0.512201219238954,0.631790158511746,0.476293691283074,0.463537303779422,0.964546102318525,0,0.588795680537589,0,0.177475806159338,0.953744759789284,0.436039249896986,0.282328141245992,0.507687647350059,0.365855945745545,0.263069711437843,0.679020569229309,0.561142271657738,0.474540072496697,0.689531376628944,0.409231043169689,0.77468420592983,0.385813221962283,0.749431733813838,0.701794825336225,0.644613162144895,0,0.220591419119515,0|short_description=p6@Pank3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:211347 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8R2W9 | |||
|association_with_transcript=-79bp_to_ENSMUST00000018990_5end | |||
|cluster_id=chr11:35582876..35582906,+ | |||
|description=CAGE_peak_6_at_Pank3_5end | |||
|id=chr11:35582876..35582906,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.02e-10,9;CL:0002251,7.02e-10,9;CL:0000239,1.58e-09,6;CL:0000677,1.58e-09,6;CL:0000584,1.58e-09,6;CL:0000066,3.83e-09,25;CL:0002076,6.53e-09,15;CL:0000075,5.52e-08,7;CL:0000223,2.43e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!9.49e-15!130;UBERON:0000925!9.49e-15!130;UBERON:0006595!9.49e-15!130;UBERON:0001007!5.82e-14!128;UBERON:0001555!5.82e-14!128;UBERON:0007026!5.82e-14!128;UBERON:0005409!2.72e-13!59;UBERON:0004921!5.33e-13!126;UBERON:0004185!5.33e-13!126;UBERON:0004923!1.78e-12!24;UBERON:0000160!2.09e-10!43;UBERON:0000344!2.13e-10!15;UBERON:0001242!2.74e-09!13;UBERON:0000060!2.74e-09!13;UBERON:0001262!2.74e-09!13;UBERON:0004786!2.74e-09!13;UBERON:0002365!5.05e-07!25;UBERON:0002330!5.05e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.67e-22,31;UBERON:0005409,4.87e-20,47;UBERON:0004119,3.03e-18,118;UBERON:0000925,3.03e-18,118;UBERON:0006595,3.03e-18,118;UBERON:0000344,1.57e-17,15;UBERON:0001007,6.16e-17,116;UBERON:0001555,6.16e-17,116;UBERON:0007026,6.16e-17,116;UBERON:0004923,2.29e-15,24;UBERON:0004921,2.35e-15,114;UBERON:0001242,2.88e-15,13;UBERON:0001262,2.88e-15,13;UBERON:0004786,2.88e-15,13;UBERON:0003350,7.02e-10,9;UBERON:0004808,7.02e-10,9;UBERON:0001277,7.02e-10,9;UBERON:0002365,6.03e-08,25;UBERON:0002330,6.03e-08,25;UBERON:0000485,9.97e-08,11;UBERON:0007023,6.79e-07,51;UBERON:0002108,7.66e-07,4 | |||
|phase1_expression=0.160148847104794,4.88565570695105,7.27998783023258,2.41971369045464,3.50627010962443,2.68606835059024,3.73780224952841,0,0.281577444303333,0,0,0.239316476986009,0,0,0,1.61980213911861,1.39912375625629,0,0,0,0.0850432901510698,0.297872853602656,0,2.55987876469451,1.60586496747019,1.72269589234506,4.73838195774982,3.878482188346,4.3705386474966,5.04060259519861,2.43903561720835,0,0,0,1.44425809875637,0.997407872150954,1.83752420636132,0.837063261473815,2.3440060335714,0,0,0,0.971020706062307,0.125896817975577,0.202753862439029,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0,0,0,0.889294796111139,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0,0,0.0914876436024097,0,0,0,0.30559649555362,0,0.142371680799103,0,0.984440513331393,0.831287161174641,0,0,0.679971333707751,0.539703191637817,0.649776417447669,2.24013443548668,0.421333260395256,0.340860645156116,0.259786004602869,0,0.14084341977668,1.28326477414318,0,0,0.865964164044856,1.01343946190039,1.01104889002957,1.48439043634778,0,0.29688427812965,0.346970653532272,0,0.461230994512117,0.753613202763113,0.23517741427141,0.125666591329675,0.494389935468748,0.578397427679647,0,0.485300549842228,0,0.484875253135222,1.86391761218122,0.292780797011547,0,2.04365644166873,0,0,0.381210681219194,0.149790639404823,0,0,0,0.255715457330331,0,0.162241263067758,0.101839363850316,0.497627882440372,0.252722758433675,1.68353484709179,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0,0.517406741478031,0.215567992932842,0.567318240503458,0.175951124163949,0.43839146485515,0.278047249225598,0.696504333044333,0.411564272815887,0,0,0.51469581422943,0.284163499395593,0.207125772535502,0.234526059981096,0.180062061461015,0,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.233530684734339,0,0,0.0810688095458557,0,0,0,0,0.102904612379284,5.94753809370836,5.02456076660734,0,0.232236671860439,0.644337306610467,0.605050573870028,0.889512175379481,1.14135375667535,0.949058123089023,2.14108641141214,2.76468729680296,1.59165177632921,2.53453313254856,4.49409704327111,3.02593269824572,1.59313018603494,0,0.114248512609729,1.1270773567308,0.203651327845314,0,0.210407459670956,0.0632365371242573,0.442830443938806,0.470996183524124,0,1.1858105083486,1.50160595144485,1.76903095601883,1.34917267430912,1.42002084971952,1.4470629585145,2.29163266603278,1.43848068725405,0.648540907100142,0.274561413188081,5.75072826109418,1.86070473834252,0.624075346229121,1.01031551178845,0.358794827043824,0.482443521363367,0.369506380333209,0.37898282354097,0.162964976442026,0.169745085775188,0,0.167506257441816,0.714130922658041,0,0.157635144106191,0,0.637819074629948,0.491589944147214,0.345369963731791,0.289298117163023,1.50791283939272,0,1.96705709207614,2.48343071674259,0.160550589987792,0,0.655739781506702,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0.292255857911312,0,0,0.283880170416537,0.35613120733451,0.162886959353576,0.329940245945071,0,0.485561272309963,0.906970670894253,0,0,0,0,0,0,1.26414703174326,1.05418608574999,1.03135543248187,0,0,0,0,0.354680467284547,0,0,0,1.17335854031855,1.27099242518292,0.220528398054962,1.31909002353184,0.322928853391811,0.663442174209714,0.477489376012546,0.656563598980245,2.91480836629851,0.18542530201051,1.53783792718067,0.82554747185289,0.555583582109135,0.753473828018764,1.50363650493128,0.686334519619568,0.169978429993855,0.139951452323658,0,0,0.316335993581135,0.203319467126849,0.972048067396211,0.209088296014469,1.31017538247707,0.674321731924103,1.1571483801547,1.57053565190418,1.94422459937689,1.24267862617385,0,0,0.165458490457098,0.388902376688095,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.629156066554265,1.44950472495604,1.15212002503146,0.316011120628178,0.405450430580328,0.205421914329655,0.25984164595559,0,0,0.360586348559907,0.147689527174577,0.302899349844443,0,0.100826185136841,0,0.0962118416403295,0.116876902181569,2.0405734525369,0.221985953374065,1.07656627931371,0.167884616364078,0.19318959403219,0.750729901804728,1.09890974560359,1.71494703263253,1.00314420807073,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0.170733605754134,0.729320151204882,0.628839487883947,0.367687016900028,0.222246727801615,0,0,0.758091635291392,0,0.565879024158229,0.561849044819294,0.512201219238954,0.631790158511746,0.476293691283074,0.463537303779422,0.964546102318525,0,0.588795680537589,0,0.177475806159338,0.953744759789284,0.436039249896986,0.282328141245992,0.507687647350059,0.365855945745545,0.263069711437843,0.679020569229309,0.561142271657738,0.474540072496697,0.689531376628944,0.409231043169689,0.77468420592983,0.385813221962283,0.749431733813838,0.701794825336225,0.644613162144895,0,0.220591419119515,0 | |||
|short_description=p6@Pank3 | |||
}} |
Revision as of 20:54, 5 August 2015
Short description: | p6@Pank3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Pank3_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -79bp_to_ENSMUST00000018990_5end |
EntrezGene: | 211347 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.02e-10 | 9 |
epithelial cell of alimentary canal | 7.02e-10 | 9 |
brush border epithelial cell | 1.58e-09 | 6 |
gut absorptive cell | 1.58e-09 | 6 |
enterocyte | 1.58e-09 | 6 |
epithelial cell | 3.83e-09 | 25 |
endo-epithelial cell | 6.53e-09 | 15 |
columnar/cuboidal epithelial cell | 5.52e-08 | 7 |
endodermal cell | 2.43e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.67e-22 | 31 |
gastrointestinal system | 4.87e-20 | 47 |
endoderm-derived structure | 3.03e-18 | 118 |
endoderm | 3.03e-18 | 118 |
presumptive endoderm | 3.03e-18 | 118 |
mucosa | 1.57e-17 | 15 |
digestive system | 6.16e-17 | 116 |
digestive tract | 6.16e-17 | 116 |
primitive gut | 6.16e-17 | 116 |
organ component layer | 2.29e-15 | 24 |
subdivision of digestive tract | 2.35e-15 | 114 |
intestinal mucosa | 2.88e-15 | 13 |
wall of intestine | 2.88e-15 | 13 |
gastrointestinal system mucosa | 2.88e-15 | 13 |
epithelium of mucosa | 7.02e-10 | 9 |
gastrointestinal system epithelium | 7.02e-10 | 9 |
intestinal epithelium | 7.02e-10 | 9 |
exocrine gland | 6.03e-08 | 25 |
exocrine system | 6.03e-08 | 25 |
simple columnar epithelium | 9.97e-08 | 11 |
adult organism | 6.79e-07 | 51 |
small intestine | 7.66e-07 | 4 |