FFCP PHASE1:Hg19::chr2:6072914..6072929,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000431188_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_ENST00000431188_5end | |||
|id=chr2:6072914..6072929,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002586;4.80e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,4.86e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.68e-23;82!UBERON:0006241;1.59e-08;3!UBERON:0003057;1.59e-08;3!UBERON:0006215;2.45e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.01e-71!94;UBERON:0001016!1.01e-71!94;UBERON:0005743!1.32e-71!86;UBERON:0001049!4.47e-69!57;UBERON:0005068!4.47e-69!57;UBERON:0006241!4.47e-69!57;UBERON:0007135!4.47e-69!57;UBERON:0001017!1.30e-65!82;UBERON:0003075!2.24e-62!86;UBERON:0007284!2.24e-62!86;UBERON:0002346!1.03e-58!90;UBERON:0002616!2.66e-57!59;UBERON:0002780!8.29e-56!41;UBERON:0001890!8.29e-56!41;UBERON:0006240!8.29e-56!41;UBERON:0000955!5.30e-55!69;UBERON:0006238!5.30e-55!69;UBERON:0007023!1.34e-54!115;UBERON:0003080!3.52e-54!42;UBERON:0001893!2.86e-48!34;UBERON:0002020!3.00e-48!34;UBERON:0003528!3.00e-48!34;UBERON:0002791!1.23e-46!33;UBERON:0003056!8.00e-46!61;UBERON:0001869!1.01e-44!32;UBERON:0004121!8.36e-38!169;UBERON:0000924!2.06e-36!173;UBERON:0006601!2.06e-36!173;UBERON:0002619!6.76e-36!22;UBERON:0000956!1.75e-33!25;UBERON:0000203!1.75e-33!25;UBERON:0001950!8.38e-33!20;UBERON:0000033!9.34e-33!123;UBERON:0000153!1.53e-31!129;UBERON:0007811!1.53e-31!129;UBERON:0000025!1.91e-20!194;UBERON:0002308!3.79e-16!9;UBERON:0000125!3.79e-16!9;UBERON:0002420!1.05e-15!9;UBERON:0007245!1.05e-15!9;UBERON:0010009!1.05e-15!9;UBERON:0010011!1.05e-15!9;UBERON:0000454!1.05e-15!9;UBERON:0003076!1.90e-15!15;UBERON:0003057!1.90e-15!15;UBERON:0004111!9.99e-15!241;UBERON:0000483!1.79e-13!309;UBERON:0001871!3.64e-13!7;UBERON:0000119!3.84e-13!312;UBERON:0009663!7.50e-13!7;UBERON:0004732!1.45e-12!13;UBERON:0000477!3.74e-12!286;UBERON:0002298!1.96e-11!8;UBERON:0004733!5.13e-11!12;UBERON:0002028!5.13e-11!12;UBERON:0007277!5.13e-11!12;UBERON:0000200!8.15e-11!6;UBERON:0000064!3.36e-10!219;UBERON:0001872!3.00e-09!5;UBERON:0000349!3.73e-09!5;UBERON:0002021!3.80e-09!5;UBERON:0001894!7.84e-09!7;UBERON:0006222!7.84e-09!7;UBERON:0000062!1.70e-08!511;UBERON:0000475!5.49e-08!365;UBERON:0000369!1.04e-07!4;UBERON:0002435!1.04e-07!4;UBERON:0000204!1.04e-07!4;UBERON:0010082!1.04e-07!4;UBERON:0000481!9.01e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.20e-55;34!UBERON:0003528;4.29e-55;34!UBERON:0002020;4.29e-55;34!UBERON:0002780;7.10e-55;41!UBERON:0001890;7.10e-55;41!UBERON:0002791;2.76e-54;32!UBERON:0001869;3.62e-54;32!UBERON:0002619;4.75e-51;22!UBERON:0000073;7.58e-51;53!UBERON:0002616;7.58e-51;53!UBERON:0001950;1.48e-46;20!UBERON:0000956;2.38e-44;25!UBERON:0000203;2.38e-44;25!UBERON:0001017;7.53e-34;75!UBERON:0000955;1.51e-33;68!UBERON:0001016;3.67e-30;83!UBERON:0000125;1.44e-22;9!UBERON:0002308;1.44e-22;9!UBERON:0002420;6.33e-22;9!UBERON:0007245;6.33e-22;9!UBERON:0010009;6.33e-22;9!UBERON:0010011;6.33e-22;9!UBERON:0000454;6.33e-22;9!UBERON:0004732;6.45e-18;13!UBERON:0009663;8.15e-18;7!UBERON:0001871;4.64e-16;6!UBERON:0002298;5.82e-16;6!UBERON:0004733;1.14e-15;12!UBERON:0002028;1.14e-15;12!UBERON:0000200;7.30e-15;6!UBERON:0007023;7.57e-15;114!UBERON:0001872;1.29e-12;5!UBERON:0000349;1.66e-12;5!UBERON:0002021;1.80e-12;5!UBERON:0001894;3.26e-12;7!UBERON:0011216;1.86e-11;132!UBERON:0000369;2.05e-10;4!UBERON:0002435;2.05e-10;4!UBERON:0000204;2.05e-10;4!UBERON:0010314;1.37e-09;132!UBERON:0002680;2.19e-09;9!UBERON:0001895;2.19e-09;9!UBERON:0000988;7.21e-09;3!UBERON:0001896;8.73e-09;3!UBERON:0005290;8.73e-09;3!UBERON:0002240;1.59e-08;3!UBERON:0005174;1.59e-08;3!UBERON:0001137;1.59e-08;3!UBERON:0001870;3.91e-08;3!UBERON:0005383;4.15e-08;3!UBERON:0005382;4.15e-08;3!UBERON:0001781;4.80e-08;3!UBERON:0001782;4.80e-08;3!UBERON:0000966;5.17e-08;5!UBERON:0005388;5.17e-08;5!UBERON:0001802;5.17e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.07e-99,56;UBERON:0005068,7.07e-99,56;UBERON:0006241,7.07e-99,56;UBERON:0007135,7.07e-99,56;UBERON:0000073,1.25e-91,53;UBERON:0002616,1.25e-91,53;UBERON:0001017,2.13e-87,81;UBERON:0003075,1.77e-84,82;UBERON:0007284,1.77e-84,82;UBERON:0001016,2.41e-83,89;UBERON:0002346,7.32e-80,86;UBERON:0000955,1.81e-77,68;UBERON:0006238,1.81e-77,68;UBERON:0002780,9.61e-77,41;UBERON:0001890,9.61e-77,41;UBERON:0003080,9.61e-77,41;UBERON:0006240,9.61e-77,41;UBERON:0010371,6.35e-66,104;UBERON:0001893,1.39e-65,34;UBERON:0003528,1.49e-65,34;UBERON:0002020,1.49e-65,34;UBERON:0003056,1.09e-63,61;UBERON:0002791,1.09e-60,32;UBERON:0001869,1.70e-60,32;UBERON:0002619,4.42e-51,22;UBERON:0010314,8.23e-51,132;UBERON:0007023,2.32e-50,114;UBERON:0004121,8.68e-48,171;UBERON:0000924,8.68e-48,171;UBERON:0006601,8.68e-48,171;UBERON:0001950,1.31e-46,20;UBERON:0000956,2.24e-44,25;UBERON:0000203,2.24e-44,25;UBERON:0011216,8.50e-29,223;UBERON:0000025,1.80e-24,192;UBERON:0000125,1.48e-22,9;UBERON:0002308,1.48e-22,9;UBERON:0003076,4.10e-22,15;UBERON:0003057,4.10e-22,15;UBERON:0002420,6.48e-22,9;UBERON:0007245,6.48e-22,9;UBERON:0010009,6.48e-22,9;UBERON:0010011,6.48e-22,9;UBERON:0000454,6.48e-22,9;UBERON:0004732,6.16e-18,13;UBERON:0009663,8.35e-18,7;UBERON:0004111,1.44e-17,240;UBERON:0001871,4.64e-16,6;UBERON:0002298,5.75e-16,6;UBERON:0004733,1.09e-15,12;UBERON:0002028,1.09e-15,12;UBERON:0007277,1.09e-15,12;UBERON:0000483,2.90e-15,306;UBERON:0000119,5.77e-15,309;UBERON:0000200,7.13e-15,6;UBERON:0001872,1.27e-12,5;UBERON:0000349,1.74e-12,5;UBERON:0002021,1.78e-12,5;UBERON:0001894,3.19e-12,7;UBERON:0006222,3.19e-12,7;UBERON:0001781,1.67e-10,4;UBERON:0000369,2.08e-10,4;UBERON:0002435,2.08e-10,4;UBERON:0000204,2.08e-10,4;UBERON:0010082,2.08e-10,4;UBERON:0000966,2.49e-10,6;UBERON:0005388,2.49e-10,6;UBERON:0001802,2.49e-10,6;UBERON:0002680,2.13e-09,9;UBERON:0001895,2.13e-09,9;UBERON:0010092,2.13e-09,9;UBERON:0000988,7.21e-09,3;UBERON:0001896,8.62e-09,3;UBERON:0005290,8.62e-09,3;UBERON:0010096,8.62e-09,3;UBERON:0002240,1.58e-08,3;UBERON:0005174,1.58e-08,3;UBERON:0001137,1.58e-08,3;UBERON:0001870,3.64e-08,3;UBERON:0005383,4.20e-08,3;UBERON:0005382,4.20e-08,3;UBERON:0001782,4.86e-08,3;UBERON:0005424,4.86e-08,3;UBERON:0000923,9.55e-07,560;UBERON:0010316,9.55e-07,560;UBERON:0005291,9.55e-07,560;UBERON:0006598,9.55e-07,560;UBERON:0010317,9.55e-07,560;UBERON:0002532,9.55e-07,560 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5198610998687,6.32625331393427,0.0945348171640679,0,0,5.30465255765736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.1151501647669,6.10073421020206,20.8943551570499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,7.8083912314573,5.41302168944387,5.02548796003046,10.2070200264506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5918566311686,31.161391341472,35.466245018409,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5602073798847,0,0,0,0,24.8536911941574,23.2104537077346,0,0,0,0.597743964753209,0,0,0.306806047506464,0.123084805461069,0,0,0,0,0,0,0,30.0493151289518,36.2723263812838,17.9652418201075,0,8.48361999963098,0,0,0,0,0,0,3.47249989866585,59.3446728495272,17.4864836006842,19.8356257212208,5.30780447669878,6.50204761697804,6.3621765174652,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,120.243621237528,2.40773294189637,50.3668558309479,0,0,0,0.394584402849391,1.20990716048664,12.2429104652196,0.821425535170343,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0.17472666824203,0,0,0,0,0,0.0882561266915003,2.48578814858586,0,0,31.5287763860276,0.195551382734803,0,1.06726497369676,0,0,0,0.686379991447858,0,0,0,0,0,0,0,106.874811390343,82.0063219563038,0,0,0,1.11712960508902,1.14580212005842,0,0,0.858452096273142,0.89268582976749,0,0,0,0,0,0,0,0,31.0139579025628,32.416410654555,0,0,0,0,0,29.585034092458,0,0,0.104909176269996,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,58.1773303626977,62.1493228190643,0,0,0.533937062838473,0,0,0,0,0,0,0,0,0,0,0,27.4681135789766,29.1642773115692,31.6733054687445,59.6345563517674,43.2623300993724,65.9463799237492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.601030435988874,1.14241563650639,0.406870733204662,0,0.537052785212442,0,0,0,0,0,0,0,22.5163670943672,0.260994291965212,0,0,0,0,3.08801447160972,0,0,0,0,0,0,0,40.6479802286088,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76736622782191,1.07824811396682,0,0.109209638192014,0,0,0,0,0,0,8.0057074828547,0,0,42.3912885636633,31.1732467916287,48.0497915762025,28.3060582652242,10.0828678488687,36.7225010584997,29.227091859365,85.6616521554926,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,37.3482842939722,49.9889983112862,30.7963326786764,46.2301256313581,9.84554656232795,0,0,0,0,0,3.36283722218824,4.24875922965642,8.87882546270061,0,0,0,72.2518261543721,33.2152506492388,0,0,0,23.5673384874003,0,0,0,0,16.6540347931609,0,0,0,0,0,0,0,0,0,0,2.9637093513365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0.437119121007915,0,0,1.88541237681301,82.2532477211621,73.0734144804632,16.4835733757526,0,0,0.128915775947154,0,0,0,0,0,0,112.664912357041,0,36.5794217227121,16.144975542594,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,118.571229842605,103.743294849481,0,0,0,0.124149428591716,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p1@ENST00000431188 | |||
}} |
Revision as of 01:33, 21 January 2014
Short description: | p1@ENST00000431188 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000431188_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000431188_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 4.86e-08 | 3 |