FFCP PHASE1:Hg19::chr2:46524878..46524891,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2034 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3374 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-11bp_to_ENST00000467888_5end | |||
|description=CAGE_peak_3_at_EPAS1_5end | |||
|id=chr2:46524878..46524891,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.36e-34!254;CL:0000223!8.37e-14!59;CL:0002076!7.74e-11!43;CL:0000076!9.93e-11!62;CL:0000213!4.45e-08!57;CL:0000215!4.45e-08!57;CL:0002368!1.25e-07!13;CL:0000220!3.71e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.88e-09;42!CL:0002368;7.77e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.49e-36,253;CL:0000223,2.59e-14,58;CL:0002076,1.85e-11,42;CL:0000076,1.02e-10,63;CL:0002368,6.72e-09,13;CL:0000213,5.95e-08,58;CL:0000215,5.95e-08,58 | |||
|ontology_enrichment_development_v019=CL:0000223;1.28e-08;58!UBERON:0008947;5.42e-07;29 | |||
|ontology_enrichment_disease=DOID:305!6.63e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.58e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.27e-20!169;UBERON:0000925!2.27e-20!169;UBERON:0006595!2.27e-20!169;UBERON:0001007!6.90e-15!155;UBERON:0001555!6.90e-15!155;UBERON:0007026!6.90e-15!155;UBERON:0004921!2.17e-14!129;UBERON:0004185!2.17e-14!129;UBERON:0000077!1.97e-13!130;UBERON:0000062!4.48e-12!511;UBERON:0001048!6.95e-12!168;UBERON:0001041!1.48e-11!98;UBERON:0000467!1.71e-11!625;UBERON:0001004!1.79e-11!72;UBERON:0000064!1.86e-11!219;UBERON:0000480!1.92e-11!626;UBERON:0000466!2.15e-11!126;UBERON:0004111!2.15e-11!241;UBERON:0000481!9.91e-11!347;UBERON:0005177!1.27e-10!107;UBERON:0000477!1.47e-10!286;UBERON:0005911!1.96e-10!82;UBERON:0000468!3.57e-10!659;UBERON:0000483!4.96e-10!309;UBERON:0000119!6.90e-10!312;UBERON:0008947!2.41e-09!38;UBERON:0003258!2.41e-09!38;UBERON:0000065!3.11e-09!53;UBERON:0009569!3.88e-09!113;UBERON:0007023!5.44e-09!115;UBERON:0000464!1.74e-08!104;UBERON:0005157!1.82e-08!51;UBERON:0005181!2.87e-08!35;UBERON:0003104!4.71e-08!238;UBERON:0009142!4.71e-08!238;UBERON:0002530!5.41e-08!59;UBERON:0002365!6.24e-08!31;UBERON:0002330!6.24e-08!31;UBERON:0005178!7.08e-08!34;UBERON:0002224!7.08e-08!34;UBERON:0005153!1.48e-07!37;UBERON:0000923!4.26e-07!604;UBERON:0005291!4.26e-07!604;UBERON:0006598!4.26e-07!604;UBERON:0002532!4.26e-07!604;UBERON:0002050!6.58e-07!605;UBERON:0005423!6.58e-07!605;UBERON:0005631!7.96e-07!14;UBERON:0000158!7.96e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;1.51e-09;44!UBERON:0005181;2.22e-08;35!UBERON:0002365;2.75e-08;31!UBERON:0002330;2.75e-08;31!UBERON:0005178;3.56e-08;34!UBERON:0002224;3.56e-08;34!UBERON:0001004;2.67e-07;65!UBERON:0000072;5.38e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.14e-20,160;UBERON:0000925,1.14e-20,160;UBERON:0006595,1.14e-20,160;UBERON:0004921,5.29e-15,118;UBERON:0001007,8.87e-15,145;UBERON:0001555,8.87e-15,145;UBERON:0007026,8.87e-15,145;UBERON:0001041,3.79e-13,87;UBERON:0005177,4.05e-12,101;UBERON:0001048,1.15e-11,160;UBERON:0001004,1.33e-11,74;UBERON:0008947,9.06e-11,38;UBERON:0003258,9.06e-11,38;UBERON:0005911,1.30e-10,82;UBERON:0009569,5.25e-10,112;UBERON:0000065,6.29e-10,54;UBERON:0005181,9.72e-10,35;UBERON:0005178,2.90e-09,34;UBERON:0002224,2.90e-09,34;UBERON:0002365,1.36e-08,31;UBERON:0002330,1.36e-08,31;UBERON:0002530,1.82e-08,59;UBERON:0005157,2.56e-08,47;UBERON:0005153,4.05e-08,37;UBERON:0005631,1.06e-07,14;UBERON:0000158,1.06e-07,14;UBERON:0001008,3.20e-07,48;UBERON:0004111,5.02e-07,240;UBERON:0000915,7.36e-07,52;UBERON:0006554,7.74e-07,47 | |||
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| |||
|short_description=p3@EPAS1 | |||
}} |
Revision as of 02:56, 21 January 2014
Short description: | p3@EPAS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EPAS1_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000467888_5end |
EntrezGene: | EPAS1 |
HGNC: | 3374 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.49e-36 | 253 |
endodermal cell | 2.59e-14 | 58 |
endo-epithelial cell | 1.85e-11 | 42 |
squamous epithelial cell | 1.02e-10 | 63 |
respiratory epithelial cell | 6.72e-09 | 13 |
lining cell | 5.95e-08 | 58 |
barrier cell | 5.95e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.14e-20 | 160 |
endoderm | 1.14e-20 | 160 |
presumptive endoderm | 1.14e-20 | 160 |
subdivision of digestive tract | 5.29e-15 | 118 |
digestive system | 8.87e-15 | 145 |
digestive tract | 8.87e-15 | 145 |
primitive gut | 8.87e-15 | 145 |
foregut | 3.79e-13 | 87 |
trunk region element | 4.05e-12 | 101 |
primordium | 1.15e-11 | 160 |
respiratory system | 1.33e-11 | 74 |
respiratory primordium | 9.06e-11 | 38 |
endoderm of foregut | 9.06e-11 | 38 |
endo-epithelium | 1.30e-10 | 82 |
subdivision of trunk | 5.25e-10 | 112 |
respiratory tract | 6.29e-10 | 54 |
thoracic segment organ | 9.72e-10 | 35 |
thoracic cavity element | 2.90e-09 | 34 |
thoracic cavity | 2.90e-09 | 34 |
exocrine gland | 1.36e-08 | 31 |
exocrine system | 1.36e-08 | 31 |
gland | 1.82e-08 | 59 |
epithelial fold | 2.56e-08 | 47 |
epithelial bud | 4.05e-08 | 37 |
extraembryonic membrane | 1.06e-07 | 14 |
membranous layer | 1.06e-07 | 14 |
renal system | 3.20e-07 | 48 |
anatomical conduit | 5.02e-07 | 240 |
thoracic segment of trunk | 7.36e-07 | 52 |
urinary system structure | 7.74e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.58e-08 | 106 |