FFCP PHASE1:Hg19::chr2:45162900..45162914,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-117bp_to_ENST00000432125_5end | |||
|coexpression_cluster_id=C369 | |||
|description=CAGE_peak_1_at_ENST00000432125_5end | |||
|id=chr2:45162900..45162914,- | |||
|ontology_enrichment_celltype=CL:0002322!9.72e-17!5;CL:0000064!1.04e-16!3;CL:0005012!1.04e-16!3;CL:0000067!1.04e-16!3;CL:0002304!1.04e-16!3;CL:0002586!1.15e-16!3;CL:0000075!3.17e-14!27;CL:0000147!5.88e-13!14;CL:0000149!1.27e-12!4;CL:0000306!1.73e-12!4;CL:0002222!1.73e-12!4;CL:0002224!1.73e-12!4;CL:0000325!2.46e-09!39;CL:0000710!6.52e-09!20;CL:0000080!1.39e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000064;2.09e-40;3!CL:0000067;2.09e-40;3!CL:0005012;2.09e-40;3!CL:0002304;2.09e-40;3!CL:0002586;4.38e-40;3!CL:0000149;2.86e-30;4!CL:0000075;1.52e-23;27!CL:0000147;2.31e-23;14!CL:0000710;1.87e-16;20!CL:0000306;1.41e-14;4!CL:0002222;1.41e-14;4!CL:0002224;1.41e-14;4!CL:0002322;2.41e-11;5!CL:0002077;3.17e-09;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.93e-40,3;CL:0000067,2.93e-40,3;CL:0005012,2.93e-40,3;CL:0002304,2.93e-40,3;CL:0002586,3.83e-40,3;CL:0000149,2.59e-30,4;CL:0000075,1.65e-23,27;CL:0000147,2.10e-23,14;CL:0000710,1.96e-16,20;CL:0000306,1.51e-14,4;CL:0002222,1.51e-14,4;CL:0002224,1.51e-14,4;CL:0002322,2.29e-11,5;CL:0002077,1.16e-09,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!3.62e-46!11;UBERON:0000970!1.60e-41!20;UBERON:0002104!2.06e-39!21;UBERON:0000019!3.16e-37!19;UBERON:0000047!3.16e-37!19;UBERON:0004088!3.16e-37!19;UBERON:0003072!3.16e-37!19;UBERON:0003071!3.16e-37!19;UBERON:0004128!3.16e-37!19;UBERON:0000020!9.70e-36!23;UBERON:0001032!3.92e-34!24;UBERON:0004456!3.92e-34!24;UBERON:0001456!1.93e-33!21;UBERON:0003056!3.76e-28!61;UBERON:0000966!5.24e-26!5;UBERON:0005388!5.24e-26!5;UBERON:0001802!5.24e-26!5;UBERON:0005085!1.61e-23!29;UBERON:0000488!2.52e-21!4;UBERON:0003075!9.33e-19!86;UBERON:0007284!9.33e-19!86;UBERON:0002346!9.83e-18!90;UBERON:0001801!1.47e-17!14;UBERON:0001778!1.04e-16!3;UBERON:0001775!1.04e-16!3;UBERON:0001781!1.15e-16!3;UBERON:0001782!1.15e-16!3;UBERON:0005424!1.15e-16!3;UBERON:0000033!1.31e-14!123;UBERON:0002203!2.89e-14!6;UBERON:0001768!2.89e-14!6;UBERON:0000153!1.03e-13!129;UBERON:0007811!1.03e-13!129;UBERON:0001444!3.23e-13!48;UBERON:0010077!1.73e-12!4;UBERON:0005389!1.73e-12!4;UBERON:0000484!1.73e-12!4;UBERON:0002546!1.73e-12!4;UBERON:0000965!1.73e-12!4;UBERON:0001803!1.73e-12!4;UBERON:0003073!1.73e-12!4;UBERON:0005426!1.73e-12!4;UBERON:0002200!1.09e-11!11;UBERON:0006876!1.09e-11!11;UBERON:0004121!2.70e-09!169;UBERON:0000924!5.62e-09!173;UBERON:0006601!5.62e-09!173;UBERON:0000073!2.65e-08!94;UBERON:0001016!2.65e-08!94;UBERON:0005743!3.90e-08!86;UBERON:0005383!1.25e-07!3;UBERON:0005382!1.25e-07!3;UBERON:0000063!1.56e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;2.62e-76;11!UBERON:0000970;5.50e-65;20!UBERON:0002104;7.47e-62;21!UBERON:0000020;2.10e-56;23!UBERON:0000019;1.40e-55;19!UBERON:0000047;1.40e-55;19!UBERON:0004088;1.40e-55;19!UBERON:0010230;1.40e-55;19!UBERON:0001032;5.10e-54;24!UBERON:0004456;5.10e-54;24!UBERON:0001456;3.18e-50;21!UBERON:0000966;1.93e-42;5!UBERON:0005388;1.93e-42;5!UBERON:0001802;1.93e-42;5!UBERON:0001778;2.09e-40;3!UBERON:0001775;2.09e-40;3!UBERON:0001781;4.38e-40;3!UBERON:0001782;4.38e-40;3!UBERON:0000488;1.65e-30;4!UBERON:0010371;4.35e-25;31!UBERON:0001801;6.28e-24;14!UBERON:0002203;1.38e-20;6!UBERON:0001768;1.38e-20;6!UBERON:0002200;1.38e-20;6!UBERON:0010077;1.41e-14;4!UBERON:0005389;1.41e-14;4!UBERON:0000484;1.41e-14;4!UBERON:0000965;1.41e-14;4!UBERON:0001803;1.41e-14;4!UBERON:0001444;7.19e-14;48!UBERON:0000033;1.42e-13;50!UBERON:0006876;1.61e-11;11!UBERON:0007811;5.64e-10;52!UBERON:0000153;3.32e-09;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,3.36e-76,11;UBERON:0000970,7.47e-62,21;UBERON:0002104,7.47e-62,21;UBERON:0000020,5.10e-54,24;UBERON:0001032,5.10e-54,24;UBERON:0004456,5.10e-54,24;UBERON:0000019,1.02e-52,20;UBERON:0000047,1.02e-52,20;UBERON:0010312,1.02e-52,20;UBERON:0004088,1.02e-52,20;UBERON:0010230,1.02e-52,20;UBERON:0003072,1.02e-52,20;UBERON:0004128,1.02e-52,20;UBERON:0003071,1.02e-52,20;UBERON:0001456,7.33e-48,22;UBERON:0001778,2.93e-40,3;UBERON:0001775,2.93e-40,3;UBERON:0001782,3.83e-40,3;UBERON:0005424,3.83e-40,3;UBERON:0000966,1.64e-35,6;UBERON:0005388,1.64e-35,6;UBERON:0001802,1.64e-35,6;UBERON:0005085,9.40e-34,31;UBERON:0000488,2.12e-30,4;UBERON:0001781,2.59e-30,4;UBERON:0001801,7.42e-24,14;UBERON:0001444,4.71e-21,49;UBERON:0002203,1.63e-20,6;UBERON:0001768,1.63e-20,6;UBERON:0002200,1.63e-20,6;UBERON:0000033,2.60e-18,56;UBERON:0000153,1.88e-16,62;UBERON:0007811,1.88e-16,62;UBERON:0003056,1.88e-16,61;UBERON:0010077,1.51e-14,4;UBERON:0005389,1.51e-14,4;UBERON:0000484,1.51e-14,4;UBERON:0002546,1.51e-14,4;UBERON:0000965,1.51e-14,4;UBERON:0001803,1.51e-14,4;UBERON:0003073,1.51e-14,4;UBERON:0005426,1.51e-14,4;UBERON:0003075,4.72e-12,82;UBERON:0007284,4.72e-12,82;UBERON:0006876,1.76e-11,11;UBERON:0002346,1.87e-11,86;UBERON:0010371,2.55e-09,104;UBERON:0000076,1.00e-07,8;UBERON:0001048,3.72e-07,160;UBERON:0010314,3.84e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5332476940163,2.4390233720882,3.07421749925941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605429710579726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.927708378250397,1.62671520017326,2.69518743039963,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,4.3299402607582,27.8232971940184,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07740150139667,3.60816110269676,2.60302715731442,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,4.81899361891361,4.59456577824004,0.067401132980677,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93774963014692,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0.255788742607303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0.628462359664008,0,0,0,0,3.28792103212619,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.83244063544298,0,2.30875085165401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000432125 | |||
}} |
Revision as of 02:54, 21 January 2014
Short description: | p1@ENST00000432125 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000432125_5end |
Coexpression cluster: | C369_Lens_eye_Ciliary_retina_H9_Retinal_Renal |
Association with transcript: | -117bp_to_ENST00000432125_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.93e-40 | 3 |
ciliated epithelial cell | 2.93e-40 | 3 |
multi-ciliated epithelial cell | 2.93e-40 | 3 |
non-pigmented ciliary epithelial cell | 2.93e-40 | 3 |
retinal pigment epithelial cell | 3.83e-40 | 3 |
visual pigment cell | 2.59e-30 | 4 |
columnar/cuboidal epithelial cell | 1.65e-23 | 27 |
pigment cell | 2.10e-23 | 14 |
neurecto-epithelial cell | 1.96e-16 | 20 |
crystallin accumulating cell | 1.51e-14 | 4 |
vertebrate lens cell | 1.51e-14 | 4 |
lens epithelial cell | 1.51e-14 | 4 |
embryonic stem cell | 2.29e-11 | 5 |
ecto-epithelial cell | 1.16e-09 | 34 |