FFCP PHASE1:Mm9::chr11:109294025..109294044,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=13929|HGNC=|MCL_coexpression_id=1271|UniProt=|association_with_transcript=0bp_to_ENSMUST00000141739_5end|description=CAGE_peak_8_at_Amz2_5end|id=chr11:109294025..109294044,+|ontology_enrichment_celltype=CL:0000542!1.66e-11!13;CL:0000051!1.66e-11!13;CL:0000838!1.05e-10!12;CL:0002031!1.34e-10!25;CL:0000988!5.07e-10!32;CL:0002032!5.07e-10!32;CL:0000037!5.07e-10!32;CL:0000566!5.07e-10!32;CL:0000837!5.07e-10!32;CL:0000084!1.76e-09!11;CL:0000827!1.76e-09!11;CL:0000791!5.26e-08!9;CL:0000789!5.26e-08!9;CL:0002420!5.26e-08!9;CL:0002419!5.26e-08!9;CL:0000790!5.26e-08!9;CL:0000738!5.55e-08!17;CL:0002087!5.55e-08!17;CL:0000553!1.19e-07!6;CL:0000556!1.19e-07!6;CL:0000624!8.59e-07!8|ontology_enrichment_celltype_v019_2=CL:0000838,2.14e-09,12;CL:0002031,2.19e-09,25;CL:0000791,6.97e-09,9;CL:0000789,6.97e-09,9;CL:0002420,6.97e-09,9;CL:0002419,6.97e-09,9;CL:0000790,6.97e-09,9;CL:0000542,1.27e-08,13;CL:0000051,1.27e-08,13;CL:0000084,3.30e-07,11;CL:0000827,3.30e-07,11;CL:0000988,5.52e-07,32;CL:0002032,5.52e-07,32;CL:0000037,5.52e-07,32;CL:0000837,5.52e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.78e-19!48;UBERON:0004177!6.87e-18!29;UBERON:0002390!1.57e-16!45;UBERON:0003061!1.57e-16!45;UBERON:0002370!5.40e-16!23;UBERON:0000974!5.40e-16!23;UBERON:0004807!5.40e-16!23;UBERON:0005058!5.40e-16!23;UBERON:0003351!5.40e-16!23;UBERON:0009113!5.40e-16!23;UBERON:0003295!5.40e-16!23;UBERON:0009722!5.40e-16!23;UBERON:0005562!5.40e-16!23;UBERON:0007690!5.40e-16!23;UBERON:0006562!4.65e-15!24;UBERON:0003408!4.65e-15!24;UBERON:0001557!4.65e-15!24;UBERON:0001042!4.65e-15!24;UBERON:0008814!4.65e-15!24;UBERON:0009145!4.65e-15!24;UBERON:0000072!1.11e-12!27;UBERON:0002405!1.04e-11!70;UBERON:0000065!4.78e-11!41;UBERON:0001004!1.31e-10!42;UBERON:0000063!2.02e-10!35;UBERON:0005057!1.09e-08!51|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.95e-24,48;UBERON:0002405,1.95e-24,48;UBERON:0004177,1.23e-23,29;UBERON:0005057,1.23e-23,29;UBERON:0002370,2.38e-23,23;UBERON:0000974,2.38e-23,23;UBERON:0004807,2.38e-23,23;UBERON:0005058,2.38e-23,23;UBERON:0003351,2.38e-23,23;UBERON:0009113,2.38e-23,23;UBERON:0003295,2.38e-23,23;UBERON:0009722,2.38e-23,23;UBERON:0005562,2.38e-23,23;UBERON:0007690,2.38e-23,23;UBERON:0006562,2.93e-22,24;UBERON:0003408,2.93e-22,24;UBERON:0001557,2.93e-22,24;UBERON:0001042,2.93e-22,24;UBERON:0008814,2.93e-22,24;UBERON:0009145,2.93e-22,24;UBERON:0002390,3.86e-21,45;UBERON:0003061,3.86e-21,45;UBERON:0000072,1.79e-19,27;UBERON:0000077,5.03e-19,35;UBERON:0007811,6.68e-14,36;UBERON:0000065,7.27e-12,41;UBERON:0001004,1.62e-11,42;UBERON:0000153,3.49e-11,43;UBERON:0003081,4.74e-09,87;UBERON:0003929,3.85e-08,55;UBERON:0002368,3.09e-07,60|phase1_expression=0,0,0,0,0,0.503637815735669,0,2.7115897922731,0.422366166455,0.234064526321993,0,0.159544317990673,2.56801094896809,1.39872643870396,0.333109761815663,0.404950534779652,0.699561878128147,5.36285681109004,7.67840828192137,4.66828616977833,0,0.198581902401771,0.522399578277871,1.11994695955385,0.45881856213434,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,10.4025215755797,4.35217285206807,20.5017217476903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,4.40194402200192,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0.426576501070468,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0.199141273254367,0,0,1.1270773567308,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0.491589944147214,0.518054945597687,0.289298117163023,0,0,0.983528546038072,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.164140899745061,0.291480836629851,0,0.854354403989263,0,0,0.376736914009382,1.0935538217682,2.0590035588587,2.37969801991397,1.53946597556024,2.3493995546752,0,0,0,0.216010681643603,0,0,0,0.0826534557253359,0,0.518459893167171,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0.288030006257865,1.26404448251271,0.608175645870493,2.67048488628551,2.7283372825337,2.14832034800978,0.79472541912506,1.20195449519969,1.47689527174577,2.1202954489111,3.20068587950999,2.01652370273681,1.16949456887703,1.82802499116626,3.3894301632655,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0.231867835620421|short_description=p8@Amz2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13929 | |||
|HGNC= | |||
|MCL_coexpression_id=1271 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000141739_5end | |||
|cluster_id=chr11:109294025..109294044,+ | |||
|description=CAGE_peak_8_at_Amz2_5end | |||
|id=chr11:109294025..109294044,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.66e-11!13;CL:0000051!1.66e-11!13;CL:0000838!1.05e-10!12;CL:0002031!1.34e-10!25;CL:0000988!5.07e-10!32;CL:0002032!5.07e-10!32;CL:0000037!5.07e-10!32;CL:0000566!5.07e-10!32;CL:0000837!5.07e-10!32;CL:0000084!1.76e-09!11;CL:0000827!1.76e-09!11;CL:0000791!5.26e-08!9;CL:0000789!5.26e-08!9;CL:0002420!5.26e-08!9;CL:0002419!5.26e-08!9;CL:0000790!5.26e-08!9;CL:0000738!5.55e-08!17;CL:0002087!5.55e-08!17;CL:0000553!1.19e-07!6;CL:0000556!1.19e-07!6;CL:0000624!8.59e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.14e-09,12;CL:0002031,2.19e-09,25;CL:0000791,6.97e-09,9;CL:0000789,6.97e-09,9;CL:0002420,6.97e-09,9;CL:0002419,6.97e-09,9;CL:0000790,6.97e-09,9;CL:0000542,1.27e-08,13;CL:0000051,1.27e-08,13;CL:0000084,3.30e-07,11;CL:0000827,3.30e-07,11;CL:0000988,5.52e-07,32;CL:0002032,5.52e-07,32;CL:0000037,5.52e-07,32;CL:0000837,5.52e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.78e-19!48;UBERON:0004177!6.87e-18!29;UBERON:0002390!1.57e-16!45;UBERON:0003061!1.57e-16!45;UBERON:0002370!5.40e-16!23;UBERON:0000974!5.40e-16!23;UBERON:0004807!5.40e-16!23;UBERON:0005058!5.40e-16!23;UBERON:0003351!5.40e-16!23;UBERON:0009113!5.40e-16!23;UBERON:0003295!5.40e-16!23;UBERON:0009722!5.40e-16!23;UBERON:0005562!5.40e-16!23;UBERON:0007690!5.40e-16!23;UBERON:0006562!4.65e-15!24;UBERON:0003408!4.65e-15!24;UBERON:0001557!4.65e-15!24;UBERON:0001042!4.65e-15!24;UBERON:0008814!4.65e-15!24;UBERON:0009145!4.65e-15!24;UBERON:0000072!1.11e-12!27;UBERON:0002405!1.04e-11!70;UBERON:0000065!4.78e-11!41;UBERON:0001004!1.31e-10!42;UBERON:0000063!2.02e-10!35;UBERON:0005057!1.09e-08!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.95e-24,48;UBERON:0002405,1.95e-24,48;UBERON:0004177,1.23e-23,29;UBERON:0005057,1.23e-23,29;UBERON:0002370,2.38e-23,23;UBERON:0000974,2.38e-23,23;UBERON:0004807,2.38e-23,23;UBERON:0005058,2.38e-23,23;UBERON:0003351,2.38e-23,23;UBERON:0009113,2.38e-23,23;UBERON:0003295,2.38e-23,23;UBERON:0009722,2.38e-23,23;UBERON:0005562,2.38e-23,23;UBERON:0007690,2.38e-23,23;UBERON:0006562,2.93e-22,24;UBERON:0003408,2.93e-22,24;UBERON:0001557,2.93e-22,24;UBERON:0001042,2.93e-22,24;UBERON:0008814,2.93e-22,24;UBERON:0009145,2.93e-22,24;UBERON:0002390,3.86e-21,45;UBERON:0003061,3.86e-21,45;UBERON:0000072,1.79e-19,27;UBERON:0000077,5.03e-19,35;UBERON:0007811,6.68e-14,36;UBERON:0000065,7.27e-12,41;UBERON:0001004,1.62e-11,42;UBERON:0000153,3.49e-11,43;UBERON:0003081,4.74e-09,87;UBERON:0003929,3.85e-08,55;UBERON:0002368,3.09e-07,60 | |||
|phase1_expression=0,0,0,0,0,0.503637815735669,0,2.7115897922731,0.422366166455,0.234064526321993,0,0.159544317990673,2.56801094896809,1.39872643870396,0.333109761815663,0.404950534779652,0.699561878128147,5.36285681109004,7.67840828192137,4.66828616977833,0,0.198581902401771,0.522399578277871,1.11994695955385,0.45881856213434,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,10.4025215755797,4.35217285206807,20.5017217476903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,4.40194402200192,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0.426576501070468,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0.199141273254367,0,0,1.1270773567308,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0.491589944147214,0.518054945597687,0.289298117163023,0,0,0.983528546038072,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.164140899745061,0.291480836629851,0,0.854354403989263,0,0,0.376736914009382,1.0935538217682,2.0590035588587,2.37969801991397,1.53946597556024,2.3493995546752,0,0,0,0.216010681643603,0,0,0,0.0826534557253359,0,0.518459893167171,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0.288030006257865,1.26404448251271,0.608175645870493,2.67048488628551,2.7283372825337,2.14832034800978,0.79472541912506,1.20195449519969,1.47689527174577,2.1202954489111,3.20068587950999,2.01652370273681,1.16949456887703,1.82802499116626,3.3894301632655,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p8@Amz2 | |||
}} |
Revision as of 09:06, 5 August 2015
Short description: | p8@Amz2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Amz2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1271 |
Association with transcript: | 0bp_to_ENSMUST00000141739_5end |
EntrezGene: | 13929 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.14e-09 | 12 |
hematopoietic lineage restricted progenitor cell | 2.19e-09 | 25 |
mature alpha-beta T cell | 6.97e-09 | 9 |
alpha-beta T cell | 6.97e-09 | 9 |
immature T cell | 6.97e-09 | 9 |
mature T cell | 6.97e-09 | 9 |
immature alpha-beta T cell | 6.97e-09 | 9 |
lymphocyte | 1.27e-08 | 13 |
common lymphoid progenitor | 1.27e-08 | 13 |
T cell | 3.30e-07 | 11 |
pro-T cell | 3.30e-07 | 11 |
hematopoietic cell | 5.52e-07 | 32 |
hematopoietic oligopotent progenitor cell | 5.52e-07 | 32 |
hematopoietic stem cell | 5.52e-07 | 32 |
hematopoietic multipotent progenitor cell | 5.52e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.95e-24 | 48 |
immune system | 1.95e-24 | 48 |
hemopoietic organ | 1.23e-23 | 29 |
immune organ | 1.23e-23 | 29 |
thymus | 2.38e-23 | 23 |
neck | 2.38e-23 | 23 |
respiratory system epithelium | 2.38e-23 | 23 |
hemolymphoid system gland | 2.38e-23 | 23 |
pharyngeal epithelium | 2.38e-23 | 23 |
thymic region | 2.38e-23 | 23 |
pharyngeal gland | 2.38e-23 | 23 |
entire pharyngeal arch endoderm | 2.38e-23 | 23 |
thymus primordium | 2.38e-23 | 23 |
early pharyngeal endoderm | 2.38e-23 | 23 |
pharynx | 2.93e-22 | 24 |
gland of gut | 2.93e-22 | 24 |
upper respiratory tract | 2.93e-22 | 24 |
chordate pharynx | 2.93e-22 | 24 |
pharyngeal arch system | 2.93e-22 | 24 |
pharyngeal region of foregut | 2.93e-22 | 24 |
hematopoietic system | 3.86e-21 | 45 |
blood island | 3.86e-21 | 45 |
segment of respiratory tract | 1.79e-19 | 27 |
mixed endoderm/mesoderm-derived structure | 5.03e-19 | 35 |
craniocervical region | 6.68e-14 | 36 |
respiratory tract | 7.27e-12 | 41 |
respiratory system | 1.62e-11 | 42 |
anterior region of body | 3.49e-11 | 43 |
lateral plate mesoderm | 4.74e-09 | 87 |
gut epithelium | 3.85e-08 | 55 |
endocrine gland | 3.09e-07 | 60 |