FFCP PHASE1:Hg19::chr2:241897363..241897398,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_at_chr2:241897363..241897398,+ | |||
|id=chr2:241897363..241897398,+ | |||
|ontology_enrichment_celltype=CL:0000188!1.12e-09!9;CL:0002564!6.26e-09!3;CL:0000594!2.17e-08!3;CL:0000875!1.24e-07!3;CL:0002396!1.24e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002602;3.16e-26;2!CL:0000594;1.04e-17;3!CL:0002564;1.18e-17;3!CL:0000680;4.05e-08;7!CL:0002575;1.20e-07;2!CL:0002598;1.99e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002602,3.59e-26,2;CL:0002564,9.94e-18,3;CL:0000594,1.28e-17,3;CL:0002575,1.12e-07,2;CL:0002598,1.64e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004905!5.20e-09!5;UBERON:0000982!5.20e-09!5;UBERON:0004770!5.20e-09!5;UBERON:0002242!6.26e-09!3;UBERON:0003068!6.26e-09!3;UBERON:0002328!6.26e-09!3;UBERON:0004880!6.26e-09!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;2.36e-40;5!UBERON:0002216;2.36e-40;5!UBERON:0011134;2.36e-40;5!UBERON:0002209;2.36e-40;5!UBERON:0002213;2.36e-40;5!UBERON:0007844;2.36e-40;5!UBERON:0011138;2.36e-40;5!UBERON:0001130;2.36e-40;5!UBERON:0001066;2.36e-40;5!UBERON:0001468;2.36e-40;5!UBERON:0006444;3.16e-26;2!UBERON:0001995;3.16e-26;2!UBERON:0004715;3.16e-26;2!UBERON:0004905;2.18e-25;8!UBERON:0000982;2.18e-25;8!UBERON:0004770;2.18e-25;8!UBERON:0002418;7.71e-18;3!UBERON:0004755;7.71e-18;3!UBERON:0002242;1.18e-17;3!UBERON:0000075;7.41e-13;16!UBERON:0004765;5.42e-12;26!UBERON:0001134;1.40e-07;16!UBERON:0002036;1.40e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,2.13e-40,5;UBERON:0002216,2.13e-40,5;UBERON:0011134,2.13e-40,5;UBERON:0002209,2.13e-40,5;UBERON:0002213,2.13e-40,5;UBERON:0005856,2.13e-40,5;UBERON:0005866,2.13e-40,5;UBERON:0005863,2.13e-40,5;UBERON:0007844,2.13e-40,5;UBERON:0011138,2.13e-40,5;UBERON:0001130,2.13e-40,5;UBERON:0001066,2.13e-40,5;UBERON:0001468,2.13e-40,5;UBERON:0006444,3.59e-26,2;UBERON:0001995,3.59e-26,2;UBERON:0004715,3.59e-26,2;UBERON:0004905,2.05e-25,8;UBERON:0000982,2.05e-25,8;UBERON:0004770,2.05e-25,8;UBERON:0002418,8.40e-18,3;UBERON:0004755,8.40e-18,3;UBERON:0002242,9.94e-18,3;UBERON:0003068,9.94e-18,3;UBERON:0002328,9.94e-18,3;UBERON:0004880,9.94e-18,3;UBERON:0000075,7.19e-13,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,3.34169152992126,3.31397375727916,0,0,0,0,0.123121058076788,0.816002764977012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869079113764942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0.61246251376468,0.737005903870608,1.13658359293342,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0,0,0,0,0,0,0.300091096084402,0.103052529238439,0,0.18611685633159,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,1.02882949704857,0,0.266422179016099,0,2.17048642156577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47229790062968,9.50323990013386,0.542530047399471,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,3.52442083432933,0.686286847621712,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.924291702687866,0.307007349452259,0.275673144969061,2.0409846524972,3.0453505721988,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71175595213568,0.636406495851874,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,19.0012867315194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0.221158519862449,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0.109209638192014,0,0,0.743614585554013,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596748666348824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.571812353413251,0,0,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0.515663103788617,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0.924351257262837,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,1.0105859447911,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr2:241897363..241897398,+ | |||
}} |
Revision as of 09:37, 21 January 2014
Short description: | p@chr2:241897363..241897398, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:241897363..241897398, + |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
annulus pulposus cell | 3.59e-26 | 2 |
nucleus pulposus cell of intervertebral disc | 9.94e-18 | 3 |
skeletal muscle satellite cell | 1.28e-17 | 3 |
central nervous system pericyte | 1.12e-07 | 2 |
bronchial smooth muscle cell | 1.64e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 2.13e-40 | 5 |
symphysis | 2.13e-40 | 5 |
nonsynovial joint | 2.13e-40 | 5 |
fibrous joint | 2.13e-40 | 5 |
cartilaginous joint | 2.13e-40 | 5 |
developing mesenchymal condensation | 2.13e-40 | 5 |
pre-cartilage condensation | 2.13e-40 | 5 |
cartilaginous condensation | 2.13e-40 | 5 |
cartilage element | 2.13e-40 | 5 |
post-cranial axial skeletal system | 2.13e-40 | 5 |
vertebral column | 2.13e-40 | 5 |
intervertebral disk | 2.13e-40 | 5 |
intervertebral joint | 2.13e-40 | 5 |
annulus fibrosus | 3.59e-26 | 2 |
fibrocartilage | 3.59e-26 | 2 |
annulus fibrosus disci intervertebralis | 3.59e-26 | 2 |
articulation | 2.05e-25 | 8 |
skeletal joint | 2.05e-25 | 8 |
articular system | 2.05e-25 | 8 |
cartilage tissue | 8.40e-18 | 3 |
skeletal tissue | 8.40e-18 | 3 |
nucleus pulposus | 9.94e-18 | 3 |
axial mesoderm | 9.94e-18 | 3 |
notochord | 9.94e-18 | 3 |
chordamesoderm | 9.94e-18 | 3 |
subdivision of skeletal system | 7.19e-13 | 16 |