FFCP PHASE1:Hg19::chr2:235887355..235887374,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23677 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10826 | |||
|TSSclassifier=strong | |||
|UniProt=C9JWW6 | |||
|association_with_transcript=6bp_to_ENST00000444916_5end | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_12_at_SH3BP4_5end | |||
|id=chr2:235887355..235887374,+ | |||
|ontology_enrichment_celltype=CL:0002178!1.83e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002178;7.60e-23;3!CL:0000322;7.70e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,8.04e-23,3;CL:0000322,7.28e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006298;2.66e-18;1!UBERON:0008801;6.23e-18;1!UBERON:0008425;6.23e-18;1!UBERON:0006595;1.76e-08;86!UBERON:0009847;9.91e-07;3!UBERON:0003353;9.91e-07;3 | |||
|ontology_enrichment_disease=DOID:305!2.67e-15!106;DOID:0050687!1.03e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:3910;1.22e-09;2!DOID:3493;1.22e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.12e-09,2;DOID:3493,1.22e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001007!8.88e-14!155;UBERON:0001555!8.88e-14!155;UBERON:0007026!8.88e-14!155;UBERON:0000077!1.32e-13!130;UBERON:0004921!2.46e-13!129;UBERON:0004185!2.46e-13!129;UBERON:0001041!1.56e-12!98;UBERON:0004119!9.17e-12!169;UBERON:0000925!9.17e-12!169;UBERON:0006595!9.17e-12!169;UBERON:0002294!1.81e-08!7;UBERON:0001173!1.81e-08!7;UBERON:0004912!1.81e-08!7;UBERON:0001723!1.22e-07!3;UBERON:0001033!1.22e-07!3;UBERON:0010056!1.22e-07!3;UBERON:0000078!1.68e-07!18;UBERON:0009497!2.20e-07!25;UBERON:0000015!2.20e-07!25;UBERON:0002423!2.20e-07!25;UBERON:0006235!2.20e-07!25;UBERON:0004161!2.20e-07!25;UBERON:0000161!5.42e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;2.18e-34;2!UBERON:0003127;3.06e-34;2!UBERON:0001041;1.05e-29;14!UBERON:0001044;8.52e-26;6!UBERON:0003293;8.52e-26;6!UBERON:0003294;8.52e-26;6!UBERON:0010047;8.52e-26;6!UBERON:0003408;8.52e-26;6!UBERON:0000167;8.52e-26;6!UBERON:0001736;2.66e-18;1!UBERON:0001831;6.23e-18;1!UBERON:0001567;6.23e-18;1!UBERON:0000945;3.97e-14;5!UBERON:0010039;3.97e-14;5!UBERON:0004921;3.30e-11;33!UBERON:0007196;1.23e-10;15!UBERON:0001558;1.23e-10;15!UBERON:0003126;1.61e-10;7!UBERON:0001005;1.61e-10;7!UBERON:0004903;1.22e-09;2!UBERON:0004089;1.22e-09;2!UBERON:0002173;1.22e-09;2!UBERON:0002186;1.22e-09;2!UBERON:0000341;1.78e-09;2!UBERON:0002365;6.80e-09;31!UBERON:0002330;6.80e-09;31!UBERON:0000161;1.38e-08;19!UBERON:0000166;1.38e-08;19!UBERON:0000058;1.59e-07;10!UBERON:0004821;7.70e-07;3!UBERON:0007499;7.70e-07;3!UBERON:0003215;7.70e-07;3!UBERON:0010368;7.70e-07;3!UBERON:0009911;7.70e-07;3!UBERON:0002299;7.70e-07;3!UBERON:0006524;7.70e-07;3!UBERON:0008874;7.70e-07;3!UBERON:0002169;7.70e-07;3!UBERON:0004894;7.70e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,3.06e-34,2;UBERON:0003127,3.62e-34,2;UBERON:0001044,1.01e-25,6;UBERON:0003293,1.01e-25,6;UBERON:0003294,1.01e-25,6;UBERON:0010047,1.01e-25,6;UBERON:0000167,1.01e-25,6;UBERON:0001736,2.66e-18,1;UBERON:0006298,2.66e-18,1;UBERON:0001831,8.72e-18,1;UBERON:0001567,8.72e-18,1;UBERON:0008801,8.72e-18,1;UBERON:0003408,1.01e-15,10;UBERON:0001041,9.20e-15,87;UBERON:0004921,4.05e-13,118;UBERON:0007196,1.23e-10,15;UBERON:0001558,1.23e-10,15;UBERON:0001007,1.54e-10,145;UBERON:0001555,1.54e-10,145;UBERON:0007026,1.54e-10,145;UBERON:0003126,1.68e-10,7;UBERON:0001005,1.68e-10,7;UBERON:0004903,1.12e-09,2;UBERON:0002173,1.12e-09,2;UBERON:0002186,1.12e-09,2;UBERON:0004089,1.44e-09,2;UBERON:0000341,1.57e-09,2;UBERON:0004119,1.79e-09,160;UBERON:0000925,1.79e-09,160;UBERON:0006595,1.79e-09,160;UBERON:0000945,3.55e-09,8;UBERON:0010039,3.55e-09,8;UBERON:0002365,5.71e-09,31;UBERON:0002330,5.71e-09,31;UBERON:0001004,6.17e-08,74;UBERON:0000161,1.07e-07,36;UBERON:0000166,1.81e-07,22;UBERON:0002530,4.36e-07,59;UBERON:0004821,7.28e-07,3;UBERON:0003215,7.28e-07,3;UBERON:0010368,7.28e-07,3;UBERON:0009911,7.28e-07,3;UBERON:0002299,7.28e-07,3;UBERON:0006524,7.28e-07,3;UBERON:0008874,7.28e-07,3;UBERON:0002169,7.28e-07,3;UBERON:0004894,7.28e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0,0,0,0.367663080345869,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0,0.435758888184812,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0,0,0,0,0,1.70749867179921,0.179021174675609,0,0,0,0,0,0,0,0,2.79871999987826,0,0.1137934482855,2.54253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0,0.687944129886466,0,0,0,0,0,0.451961481561065,0.137041924646751,0,0.0633107959558787,0,0.160317640503067,0.85381197895741,1.59847687665704,0.576361668616424,0,0,0.576219191952599,0,0,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0,0.739280431085226,0,0,0,0.0634158101939068,0,2.19303106742873,0.992422356778588,0,0.127762427639595,0,0,0,0,0,0,0.514464028312255,0,0,0.118193840883968,0,1.33438257845874,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,12.4765934057881,0,0,0,0.22910686854405,0,0,0,2.35560560676583,0,0,0,0,0.485710993059139,0,0,0,0,0,0.301925687133347,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,15.5967956357544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,1.91910583710883,0.23806443146374,0,0,0,0.0636471582781649,0,0.870866991587845,0.342233301085281,0.673520530145875,3.08405483188508,2.32862249582209,0.0814032686109745,0,0,0.808426818959282,0,0.122241444182866,0,0,0,0 | |||
|short_description=p12@SH3BP4 | |||
}} |
Revision as of 09:21, 21 January 2014
Short description: | p12@SH3BP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SH3BP4_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 6bp_to_ENST00000444916_5end |
EntrezGene: | SH3BP4 |
HGNC: | 10826 |
UniProt: | C9JWW6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 8.04e-23 | 3 |
pneumocyte | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.12e-09 | 2 |
signet ring cell adenocarcinoma | 1.22e-09 | 2 |