FFCP PHASE1:Mm9::chr10:79076757..79076800,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=237397|HGNC=|MCL_coexpression_id=87|UniProt=Q5HZI2|association_with_transcript=0bp_to_ENSMUST00000059699,NM_001168624,NM_198614,uc007fzb.2,uc007fzc.1_5end|description=CAGE_peak_1_at_C2cd4c_5end|id=chr10:79076757..79076800,-|ontology_enrichment_celltype=CL:0000117!2.68e-12!23;CL:0000337!2.68e-12!23;CL:0000540!6.46e-10!33;CL:0000047!6.46e-10!33;CL:0000031!6.46e-10!33;CL:0000404!6.46e-10!33;CL:0000393!3.87e-08!39;CL:0000211!3.87e-08!39;CL:0000221!1.33e-07!44;CL:0000133!1.33e-07!44;CL:0002319!3.50e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.27e-27,23;CL:0000337,1.27e-27,23;CL:0000540,6.51e-18,33;CL:0000047,6.51e-18,33;CL:0000031,6.51e-18,33;CL:0000404,6.51e-18,33;CL:0000393,1.74e-14,39;CL:0000211,1.74e-14,39;CL:0002319,9.71e-13,43;CL:0000221,2.36e-12,44;CL:0000133,2.36e-12,44;CL:0002613,1.72e-08,3;CL:0000120,1.92e-08,3;CL:0002612,2.66e-08,3;CL:0002614,5.06e-08,3;CL:0002610,2.52e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.23e-17!73;UBERON:0005743!5.23e-17!73;UBERON:0000073!2.43e-16!75;UBERON:0001016!2.43e-16!75;UBERON:0001049!6.27e-16!52;UBERON:0005068!6.27e-16!52;UBERON:0006241!6.27e-16!52;UBERON:0007135!6.27e-16!52;UBERON:0002616!8.73e-14!49;UBERON:0002346!2.09e-13!71;UBERON:0003075!2.09e-13!71;UBERON:0007284!2.09e-13!71;UBERON:0000955!3.76e-13!50;UBERON:0006238!3.76e-13!50;UBERON:0000033!4.32e-13!63;UBERON:0002020!2.68e-12!34;UBERON:0004121!5.99e-12!102;UBERON:0000924!5.99e-12!102;UBERON:0006601!5.99e-12!102;UBERON:0003080!1.10e-11!40;UBERON:0003056!1.35e-11!49;UBERON:0002780!4.22e-11!39;UBERON:0001890!4.22e-11!39;UBERON:0006240!4.22e-11!39;UBERON:0002791!6.55e-09!29;UBERON:0003528!6.55e-09!29;UBERON:0001893!6.55e-09!29;UBERON:0002420!6.49e-07!8;UBERON:0007245!6.49e-07!8;UBERON:0010009!6.49e-07!8;UBERON:0010011!6.49e-07!8;UBERON:0000454!6.49e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.04e-26,34;UBERON:0000073,1.80e-23,54;UBERON:0001017,1.68e-22,73;UBERON:0001016,1.04e-21,75;UBERON:0001049,2.30e-20,52;UBERON:0005068,2.30e-20,52;UBERON:0006241,2.30e-20,52;UBERON:0007135,2.30e-20,52;UBERON:0003528,5.30e-17,29;UBERON:0002791,5.30e-17,29;UBERON:0001893,5.30e-17,29;UBERON:0004121,1.22e-15,95;UBERON:0000924,1.22e-15,95;UBERON:0006601,1.22e-15,95;UBERON:0002346,1.94e-15,64;UBERON:0003075,1.94e-15,64;UBERON:0007284,1.94e-15,64;UBERON:0002420,1.11e-14,8;UBERON:0007245,1.11e-14,8;UBERON:0010009,1.11e-14,8;UBERON:0010011,1.11e-14,8;UBERON:0000454,1.11e-14,8;UBERON:0003080,1.64e-14,40;UBERON:0002240,3.91e-14,6;UBERON:0005174,3.91e-14,6;UBERON:0001137,3.91e-14,6;UBERON:0002780,3.09e-13,39;UBERON:0001890,3.09e-13,39;UBERON:0006240,3.09e-13,39;UBERON:0010371,8.19e-13,73;UBERON:0001948,1.38e-12,5;UBERON:0002315,1.38e-12,5;UBERON:0002616,4.75e-12,46;UBERON:0000955,1.06e-11,47;UBERON:0006238,1.06e-11,47;UBERON:0003056,4.76e-11,49;UBERON:0002950,7.97e-10,4;UBERON:0001891,7.97e-10,4;UBERON:0009616,7.97e-10,4;UBERON:0010286,7.97e-10,4;UBERON:0010314,5.53e-09,92;UBERON:0000369,2.09e-08,5;UBERON:0002435,2.09e-08,5;UBERON:0000204,2.09e-08,5;UBERON:0010082,2.09e-08,5;UBERON:0002257,2.66e-08,3;UBERON:0002038,5.06e-08,3;UBERON:0009663,5.06e-08,3;UBERON:0009661,5.06e-08,3;UBERON:0000125,5.06e-08,3;UBERON:0002308,5.06e-08,3;UBERON:0004684,2.52e-07,3;UBERON:0002275,2.52e-07,3;UBERON:0002021,2.85e-07,10;UBERON:0000411,2.85e-07,10;UBERON:0001950,2.85e-07,10;UBERON:0002619,5.10e-07,17;UBERON:0000956,6.28e-07,21;UBERON:0001869,6.28e-07,21;UBERON:0000203,6.28e-07,21|phase1_expression=0.80074423552397,0,0,0.30246421130683,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.680346321208558,0,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.367093504323363,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0,0,5.26022798234954,12.1667925232568,6.97214543856797,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0.270011876663381,0,5.14171771926846,4.8591079009355,0.61245399607477,0.383381884072945,0,2.20231761998777,1.65993539510744,3.07213066512487,6.3305418110493,9.05727671663856,7.29278718779464,2.51264699101243,7.31591393041184,4.12555268997387,8.2496003932627,5.83723891276322,5.03278503728312,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0.628340120440365,0.255457055208591,0,0,0,1.79748767285787,0.457500602818626,3.01570445070875,2.25971616249959,0.255715457330331,1.45451631191692,0.486723789203273,0.203678727700633,0,0.252722758433675,0.420883711772948,0.130120442962704,0.689706313300419,0.360124259610698,0.150704817835715,0.136072998302656,0.12811372028485,0.187403449119458,0,0.215567992932842,0,0,0,0.278047249225598,0.348252166522167,0,0.796137067273973,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0,0,0,0,0,0,0,1.89260953707715,2.36680608472354,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0,0.379335801906163,0.228497025219458,0,0,0.387904974335251,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0,0.390438744296638,0.646270193198397,0,0,0.566153061577665,0,0,0.395287777946524,0,0.283880170416537,0,0.325773918707152,0.164970122972535,0,1.21390318077491,1.209294227859,0.188605079755898,0.590603785761546,0.614870295887855,1.03371317267288,0,0.712994756769443,0,0,0,0.680879211507576,0.720244376125241,0.129358683782755,0.428674070063185,0.177340233642274,0.535106452806212,0.164549020602121,0.304464949114599,0,0,0,0,0,0.180938774784468,0,0,0.291480836629851,1.11255181206306,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0.129614973291793,0,1.69107881605257,0,0.165458490457098,0.388902376688095,0.387479470433193,0,0.352071715937262,0.651021924219751,0.838874755405687,0.483168241652012,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0,0,0.19318959403219,0,0,0,0,0,0.920650473014354,1.71868654031819,2.23409137046794,0.685082519770642,0,2.70009000092722,1.80128481289688,1.81256963593682,1.03552062350364,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.735374033800057,0.666740183404846,0.412070114477788,0.320919209591815,1.51618327058278,0.760437899670719,0.565879024158229,0.749132059759059,0.768301828858431,0.516919220600519,2.38146845641537,0.579421629724277,0.77163688185482,0.824171801606613,0.588795680537589,1.02860775715625,0.354951612318675,1.1921809497366,0.581385666529314,0.376437521661322,1.26921911837515,0.73171189149109,0.526139422875686,0.543216455383447,0.561142271657738,0.830445126869219,1.0835493061312,0.409231043169689,0.464810523557898,0.578719832943424,1.49886346762768,0.701794825336225,0.214871054048298,0,0,0|short_description=p1@C2cd4c}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:237397 | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q5HZI2 | |||
|association_with_transcript=0bp_to_ENSMUST00000059699,NM_001168624,NM_198614,uc007fzb.2,uc007fzc.1_5end | |||
|cluster_id=chr10:79076757..79076800,- | |||
|description=CAGE_peak_1_at_C2cd4c_5end | |||
|id=chr10:79076757..79076800,- | |||
|ontology_enrichment_celltype=CL:0000117!2.68e-12!23;CL:0000337!2.68e-12!23;CL:0000540!6.46e-10!33;CL:0000047!6.46e-10!33;CL:0000031!6.46e-10!33;CL:0000404!6.46e-10!33;CL:0000393!3.87e-08!39;CL:0000211!3.87e-08!39;CL:0000221!1.33e-07!44;CL:0000133!1.33e-07!44;CL:0002319!3.50e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.27e-27,23;CL:0000337,1.27e-27,23;CL:0000540,6.51e-18,33;CL:0000047,6.51e-18,33;CL:0000031,6.51e-18,33;CL:0000404,6.51e-18,33;CL:0000393,1.74e-14,39;CL:0000211,1.74e-14,39;CL:0002319,9.71e-13,43;CL:0000221,2.36e-12,44;CL:0000133,2.36e-12,44;CL:0002613,1.72e-08,3;CL:0000120,1.92e-08,3;CL:0002612,2.66e-08,3;CL:0002614,5.06e-08,3;CL:0002610,2.52e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.23e-17!73;UBERON:0005743!5.23e-17!73;UBERON:0000073!2.43e-16!75;UBERON:0001016!2.43e-16!75;UBERON:0001049!6.27e-16!52;UBERON:0005068!6.27e-16!52;UBERON:0006241!6.27e-16!52;UBERON:0007135!6.27e-16!52;UBERON:0002616!8.73e-14!49;UBERON:0002346!2.09e-13!71;UBERON:0003075!2.09e-13!71;UBERON:0007284!2.09e-13!71;UBERON:0000955!3.76e-13!50;UBERON:0006238!3.76e-13!50;UBERON:0000033!4.32e-13!63;UBERON:0002020!2.68e-12!34;UBERON:0004121!5.99e-12!102;UBERON:0000924!5.99e-12!102;UBERON:0006601!5.99e-12!102;UBERON:0003080!1.10e-11!40;UBERON:0003056!1.35e-11!49;UBERON:0002780!4.22e-11!39;UBERON:0001890!4.22e-11!39;UBERON:0006240!4.22e-11!39;UBERON:0002791!6.55e-09!29;UBERON:0003528!6.55e-09!29;UBERON:0001893!6.55e-09!29;UBERON:0002420!6.49e-07!8;UBERON:0007245!6.49e-07!8;UBERON:0010009!6.49e-07!8;UBERON:0010011!6.49e-07!8;UBERON:0000454!6.49e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.04e-26,34;UBERON:0000073,1.80e-23,54;UBERON:0001017,1.68e-22,73;UBERON:0001016,1.04e-21,75;UBERON:0001049,2.30e-20,52;UBERON:0005068,2.30e-20,52;UBERON:0006241,2.30e-20,52;UBERON:0007135,2.30e-20,52;UBERON:0003528,5.30e-17,29;UBERON:0002791,5.30e-17,29;UBERON:0001893,5.30e-17,29;UBERON:0004121,1.22e-15,95;UBERON:0000924,1.22e-15,95;UBERON:0006601,1.22e-15,95;UBERON:0002346,1.94e-15,64;UBERON:0003075,1.94e-15,64;UBERON:0007284,1.94e-15,64;UBERON:0002420,1.11e-14,8;UBERON:0007245,1.11e-14,8;UBERON:0010009,1.11e-14,8;UBERON:0010011,1.11e-14,8;UBERON:0000454,1.11e-14,8;UBERON:0003080,1.64e-14,40;UBERON:0002240,3.91e-14,6;UBERON:0005174,3.91e-14,6;UBERON:0001137,3.91e-14,6;UBERON:0002780,3.09e-13,39;UBERON:0001890,3.09e-13,39;UBERON:0006240,3.09e-13,39;UBERON:0010371,8.19e-13,73;UBERON:0001948,1.38e-12,5;UBERON:0002315,1.38e-12,5;UBERON:0002616,4.75e-12,46;UBERON:0000955,1.06e-11,47;UBERON:0006238,1.06e-11,47;UBERON:0003056,4.76e-11,49;UBERON:0002950,7.97e-10,4;UBERON:0001891,7.97e-10,4;UBERON:0009616,7.97e-10,4;UBERON:0010286,7.97e-10,4;UBERON:0010314,5.53e-09,92;UBERON:0000369,2.09e-08,5;UBERON:0002435,2.09e-08,5;UBERON:0000204,2.09e-08,5;UBERON:0010082,2.09e-08,5;UBERON:0002257,2.66e-08,3;UBERON:0002038,5.06e-08,3;UBERON:0009663,5.06e-08,3;UBERON:0009661,5.06e-08,3;UBERON:0000125,5.06e-08,3;UBERON:0002308,5.06e-08,3;UBERON:0004684,2.52e-07,3;UBERON:0002275,2.52e-07,3;UBERON:0002021,2.85e-07,10;UBERON:0000411,2.85e-07,10;UBERON:0001950,2.85e-07,10;UBERON:0002619,5.10e-07,17;UBERON:0000956,6.28e-07,21;UBERON:0001869,6.28e-07,21;UBERON:0000203,6.28e-07,21 | |||
|phase1_expression=0.80074423552397,0,0,0.30246421130683,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.680346321208558,0,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.367093504323363,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0,0,5.26022798234954,12.1667925232568,6.97214543856797,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0.270011876663381,0,5.14171771926846,4.8591079009355,0.61245399607477,0.383381884072945,0,2.20231761998777,1.65993539510744,3.07213066512487,6.3305418110493,9.05727671663856,7.29278718779464,2.51264699101243,7.31591393041184,4.12555268997387,8.2496003932627,5.83723891276322,5.03278503728312,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0.628340120440365,0.255457055208591,0,0,0,1.79748767285787,0.457500602818626,3.01570445070875,2.25971616249959,0.255715457330331,1.45451631191692,0.486723789203273,0.203678727700633,0,0.252722758433675,0.420883711772948,0.130120442962704,0.689706313300419,0.360124259610698,0.150704817835715,0.136072998302656,0.12811372028485,0.187403449119458,0,0.215567992932842,0,0,0,0.278047249225598,0.348252166522167,0,0.796137067273973,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0,0,0,0,0,0,0,1.89260953707715,2.36680608472354,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0,0.379335801906163,0.228497025219458,0,0,0.387904974335251,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0,0.390438744296638,0.646270193198397,0,0,0.566153061577665,0,0,0.395287777946524,0,0.283880170416537,0,0.325773918707152,0.164970122972535,0,1.21390318077491,1.209294227859,0.188605079755898,0.590603785761546,0.614870295887855,1.03371317267288,0,0.712994756769443,0,0,0,0.680879211507576,0.720244376125241,0.129358683782755,0.428674070063185,0.177340233642274,0.535106452806212,0.164549020602121,0.304464949114599,0,0,0,0,0,0.180938774784468,0,0,0.291480836629851,1.11255181206306,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0.129614973291793,0,1.69107881605257,0,0.165458490457098,0.388902376688095,0.387479470433193,0,0.352071715937262,0.651021924219751,0.838874755405687,0.483168241652012,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0,0,0.19318959403219,0,0,0,0,0,0.920650473014354,1.71868654031819,2.23409137046794,0.685082519770642,0,2.70009000092722,1.80128481289688,1.81256963593682,1.03552062350364,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.735374033800057,0.666740183404846,0.412070114477788,0.320919209591815,1.51618327058278,0.760437899670719,0.565879024158229,0.749132059759059,0.768301828858431,0.516919220600519,2.38146845641537,0.579421629724277,0.77163688185482,0.824171801606613,0.588795680537589,1.02860775715625,0.354951612318675,1.1921809497366,0.581385666529314,0.376437521661322,1.26921911837515,0.73171189149109,0.526139422875686,0.543216455383447,0.561142271657738,0.830445126869219,1.0835493061312,0.409231043169689,0.464810523557898,0.578719832943424,1.49886346762768,0.701794825336225,0.214871054048298,0,0,0 | |||
|short_description=p1@C2cd4c | |||
}} |
Revision as of 18:32, 4 August 2015
Short description: | p1@C2cd4c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_C2cd4c_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | 0bp_to_ENSMUST00000059699, NM_001168624, NM_198614, uc007fzb.2, uc007fzc.1_5end |
EntrezGene: | 237397 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.27e-27 | 23 |
neuroblast (sensu Vertebrata) | 1.27e-27 | 23 |
neuron | 6.51e-18 | 33 |
neuronal stem cell | 6.51e-18 | 33 |
neuroblast | 6.51e-18 | 33 |
electrically signaling cell | 6.51e-18 | 33 |
electrically responsive cell | 1.74e-14 | 39 |
electrically active cell | 1.74e-14 | 39 |
neural cell | 9.71e-13 | 43 |
ectodermal cell | 2.36e-12 | 44 |
neurectodermal cell | 2.36e-12 | 44 |
striatum neuron | 1.72e-08 | 3 |
granule cell | 1.92e-08 | 3 |
neuron of the ventral spinal cord | 2.66e-08 | 3 |
neuron of the substantia nigra | 5.06e-08 | 3 |
raphe nuclei neuron | 2.52e-07 | 3 |