FFCP PHASE1:Hg19::chr2:223288872..223288887,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130367 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19953 | |||
|TSSclassifier=weak | |||
|UniProt=Q8IWX5 | |||
|association_with_transcript=-348bp_to_ENST00000321276_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_8_at_SGPP2_5end | |||
|id=chr2:223288872..223288887,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.73e-18!42;CL:0000860!4.83e-16!45;CL:0002009!1.17e-13!65;CL:0002194!1.94e-13!63;CL:0000576!1.94e-13!63;CL:0000040!1.94e-13!63;CL:0000559!1.94e-13!63;CL:0000557!1.11e-11!71;CL:0000839!3.76e-11!70;CL:0000766!1.48e-09!76;CL:0002087!2.22e-09!119;CL:0002031!6.45e-08!124;CL:0000738!8.72e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.29e-36;33!CL:0002057;4.29e-36;33!CL:0000473;1.62e-27;39!CL:0000234;1.62e-27;39!CL:0000576;1.19e-18;48!CL:0000766;6.11e-13;69!CL:0002087;3.21e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.27e-36,42;CL:0002057,3.27e-36,42;CL:0000473,4.09e-34,48;CL:0000234,4.09e-34,48;CL:0002194,3.80e-26,59;CL:0000576,3.80e-26,59;CL:0000040,3.80e-26,59;CL:0000559,3.80e-26,59;CL:0002009,4.04e-25,61;CL:0000839,8.02e-23,66;CL:0000557,2.10e-22,67;CL:0000766,1.75e-20,72;CL:0002087,1.02e-14,115;CL:0002031,7.45e-14,120;CL:0000763,6.54e-12,108;CL:0000049,6.54e-12,108;CL:0000738,1.58e-11,136;CL:0002032,7.66e-09,161;CL:0000837,7.66e-09,161;CL:0000037,3.08e-08,168;CL:0000988,1.55e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.11e-27;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.21e-19!57;UBERON:0005068!7.21e-19!57;UBERON:0006241!7.21e-19!57;UBERON:0007135!7.21e-19!57;UBERON:0007023!8.18e-17!115;UBERON:0002616!1.39e-15!59;UBERON:0003075!2.19e-14!86;UBERON:0007284!2.19e-14!86;UBERON:0002780!9.14e-14!41;UBERON:0001890!9.14e-14!41;UBERON:0006240!9.14e-14!41;UBERON:0000955!1.65e-13!69;UBERON:0006238!1.65e-13!69;UBERON:0002020!1.69e-13!34;UBERON:0003528!1.69e-13!34;UBERON:0003080!2.91e-13!42;UBERON:0002346!3.26e-13!90;UBERON:0001893!3.65e-13!34;UBERON:0002791!2.56e-12!33;UBERON:0001869!1.52e-11!32;UBERON:0001017!2.38e-11!82;UBERON:0003056!9.16e-11!61;UBERON:0005743!2.34e-10!86;UBERON:0002619!5.04e-10!22;UBERON:0000062!9.99e-10!511;UBERON:0001950!1.23e-09!20;UBERON:0002390!1.68e-09!102;UBERON:0003061!1.68e-09!102;UBERON:0002371!2.54e-09!80;UBERON:0000073!4.86e-09!94;UBERON:0001016!4.86e-09!94;UBERON:0000153!2.13e-08!129;UBERON:0007811!2.13e-08!129;UBERON:0000956!2.24e-08!25;UBERON:0000203!2.24e-08!25;UBERON:0002193!2.86e-08!112;UBERON:0001474!4.68e-08!86;UBERON:0002050!6.46e-08!605;UBERON:0005423!6.46e-08!605;UBERON:0000922!7.87e-08!612;UBERON:0000033!8.84e-08!123;UBERON:0000923!1.44e-07!604;UBERON:0005291!1.44e-07!604;UBERON:0006598!1.44e-07!604;UBERON:0002532!1.44e-07!604;UBERON:0002308!4.11e-07!9;UBERON:0000125!4.11e-07!9;UBERON:0003076!5.88e-07!15;UBERON:0003057!5.88e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;4.40e-10;6!UBERON:0000073;2.47e-08;53!UBERON:0002616;2.47e-08;53!UBERON:0002780;1.24e-07;41!UBERON:0001890;1.24e-07;41!UBERON:0003528;7.25e-07;34!UBERON:0002020;7.25e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.96e-19,76;UBERON:0001474,2.41e-17,82;UBERON:0004765,2.46e-15,90;UBERON:0002405,1.14e-14,93;UBERON:0002390,1.18e-13,98;UBERON:0003061,1.18e-13,98;UBERON:0001434,2.80e-13,100;UBERON:0002193,6.54e-12,108;UBERON:0000073,7.37e-12,53;UBERON:0002616,7.37e-12,53;UBERON:0001049,4.65e-11,56;UBERON:0005068,4.65e-11,56;UBERON:0006241,4.65e-11,56;UBERON:0007135,4.65e-11,56;UBERON:0002298,5.77e-10,6;UBERON:0000955,1.04e-09,68;UBERON:0006238,1.04e-09,68;UBERON:0003528,1.24e-08,34;UBERON:0002020,1.24e-08,34;UBERON:0002780,2.00e-08,41;UBERON:0001890,2.00e-08,41;UBERON:0003080,2.00e-08,41;UBERON:0006240,2.00e-08,41;UBERON:0001017,1.20e-07,81;UBERON:0002791,1.93e-07,32;UBERON:0007023,4.31e-07,114;UBERON:0001893,6.27e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,1.29902789771517,1.88831355734875,0.708397031823113,0,0,0,0,0,0,0,0,0,3.32397245119126,0.802177789880567,1.08505435357926,0.447830948479849,0,0,0,0,0,1.16214518452842,1.23350366406548,3.71647645074124,2.8769239232215,1.2808035326455,2.36482229888585,9.3081333798887,7.74581620300591,8.12558919566051,0.188242339542605,0.272906150057846,1.12361742222542,3.36692281607993,3.53021929783703,5.11469700639233,0,0,0,18.863600510858,22.1280237629545,32.3867569477699,0.502497330513487,0,0.868755378820466,12.7133895553007,20.2552699793161,23.7346790580663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92355994087075,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0,0.392937226493138,0.364295288292542,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.702012795417713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.231046011313244,0.784349769176855,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0.254876273045038,1.66215201785745,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.991709492165869,1.15314040419064,0.255225424989168,1.92199783625545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0.276283915531148,0,0,0.246169610922139,0,0,1.07412704805365,0,0,0,0,0,1.29875337426592,0,0,0,0,0,0.508507300585533,0,0,0,0,0.885741385813839,1.20596438625408,0,0.552896299656123,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0.176915129006678,0,0.889563386041866,0.370691816839509,0.104421949505455,0.269604531922708,0,0.468528891450678,0,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,3.69992409838731,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0,0,0.50648636764703,0,0,0,0.19980960958213,0.288180834308212,0,0,0,0,0,0,0,0,0,0,1.9166753044879,0,0,0.262887354279314,0,0.229160424011684,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0,0.169346664131569,0,1.63444087333891,0,0,0,0.2249738915515,0,0.425246896606173,0,1.18208560948797,1.46872846777995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904980694530854,1.98348902614035,0.171086837884329,0,1.17466153824464,1.41483874589699,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.876336514945499,0,2.21858103073705,1.05563885000352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0,1.38258436151731,0,0,0,0,0.737318726261158,0,0.79994958341972,0,0,0,0,0.139879507719444,0.622077260032973,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,1.41696576325585,2.39450788585727,0,0,0.414943514785307,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.887136517302272,0.675375846183947,1.56215619722769,1.03343398250592,0.507326481551255,0,0,0,0,0.255524855279191,0,2.01770233331294,0,0,0,0.345701962667338,0,1.01954599465248,0.263091094251396,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0,0.158013611732727,0,0,0,0.414432328326074,0,0.691259661814092,0,0,0,0,0.22910686854405,0.31020638566432,0,2.23710863595585,0,0.975343399858155,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0.399764623699716,0,0,0,0.730336388246517,0,1.00337708206016,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,1.65492793379032,0.213233981900981,0.23806443146374,0,0.0620747142958579,0.112131862580613,1.20929600728513,1.0105859447911,0.217716747896961,0,0.202056159043763,0.430333232356058,0,0.407016343054873,0,0,0.0898252021065869,0,0,0.406896178315738,0,0,1.28227396921293 | |||
|short_description=p8@SGPP2 | |||
}} |
Revision as of 08:52, 21 January 2014
Short description: | p8@SGPP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SGPP2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -348bp_to_ENST00000321276_5end |
EntrezGene: | SGPP2 |
HGNC: | 19953 |
UniProt: | Q8IWX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.27e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.27e-36 | 42 |
defensive cell | 4.09e-34 | 48 |
phagocyte | 4.09e-34 | 48 |
monopoietic cell | 3.80e-26 | 59 |
monocyte | 3.80e-26 | 59 |
monoblast | 3.80e-26 | 59 |
promonocyte | 3.80e-26 | 59 |
macrophage dendritic cell progenitor | 4.04e-25 | 61 |
myeloid lineage restricted progenitor cell | 8.02e-23 | 66 |
granulocyte monocyte progenitor cell | 2.10e-22 | 67 |
myeloid leukocyte | 1.75e-20 | 72 |
nongranular leukocyte | 1.02e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 7.45e-14 | 120 |
myeloid cell | 6.54e-12 | 108 |
common myeloid progenitor | 6.54e-12 | 108 |
leukocyte | 1.58e-11 | 136 |
hematopoietic oligopotent progenitor cell | 7.66e-09 | 161 |
hematopoietic multipotent progenitor cell | 7.66e-09 | 161 |
hematopoietic stem cell | 3.08e-08 | 168 |
hematopoietic cell | 1.55e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.96e-19 | 76 |
bone element | 2.41e-17 | 82 |
skeletal element | 2.46e-15 | 90 |
immune system | 1.14e-14 | 93 |
hematopoietic system | 1.18e-13 | 98 |
blood island | 1.18e-13 | 98 |
skeletal system | 2.80e-13 | 100 |
hemolymphoid system | 6.54e-12 | 108 |
regional part of nervous system | 7.37e-12 | 53 |
regional part of brain | 7.37e-12 | 53 |
neural tube | 4.65e-11 | 56 |
neural rod | 4.65e-11 | 56 |
future spinal cord | 4.65e-11 | 56 |
neural keel | 4.65e-11 | 56 |
brainstem | 5.77e-10 | 6 |
brain | 1.04e-09 | 68 |
future brain | 1.04e-09 | 68 |
brain grey matter | 1.24e-08 | 34 |
gray matter | 1.24e-08 | 34 |
regional part of forebrain | 2.00e-08 | 41 |
forebrain | 2.00e-08 | 41 |
anterior neural tube | 2.00e-08 | 41 |
future forebrain | 2.00e-08 | 41 |
central nervous system | 1.20e-07 | 81 |
regional part of telencephalon | 1.93e-07 | 32 |
adult organism | 4.31e-07 | 114 |
telencephalon | 6.27e-07 | 34 |