FFCP PHASE1:Hg19::chr2:220083671..220083685,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10058 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=47 | |||
|TSSclassifier=strong | |||
|UniProt=B4E055 | |||
|association_with_transcript=0bp_to_ENST00000427013,ENST00000439002_5end | |||
|description=CAGE_peak_1_at_ABCB6_5end | |||
|id=chr2:220083671..220083685,- | |||
|ontology_enrichment_celltype=CL:0000066!1.76e-15!254;CL:0002321!1.20e-09!248;CL:0000220!1.51e-09!246;CL:0000223!2.68e-08!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.96e-14,253;CL:0000223,1.94e-09,58;CL:0002321,8.94e-09,250 | |||
|ontology_enrichment_development_v019=UBERON:0001041;2.03e-07;30 | |||
|ontology_enrichment_disease=DOID:0050687!7.21e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.73e-09,143;DOID:305,3.21e-07,106;DOID:162,5.62e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.59e-11!169;UBERON:0000925!3.59e-11!169;UBERON:0006595!3.59e-11!169;UBERON:0009569!5.34e-11!113;UBERON:0000077!1.49e-09!130;UBERON:0005911!4.21e-09!82;UBERON:0001007!7.40e-09!155;UBERON:0001555!7.40e-09!155;UBERON:0007026!7.40e-09!155;UBERON:0004921!1.23e-08!129;UBERON:0004185!1.23e-08!129;UBERON:0005177!1.83e-08!107;UBERON:0000466!2.24e-08!126;UBERON:0008947!4.79e-08!38;UBERON:0003258!4.79e-08!38;UBERON:0001004!9.25e-08!72;UBERON:0001041!1.83e-07!98;UBERON:0000475!2.03e-07!365;UBERON:0002100!2.72e-07!216;UBERON:0000065!8.69e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;2.01e-07;44!UBERON:0000072;5.35e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.51e-14,160;UBERON:0000925,1.51e-14,160;UBERON:0006595,1.51e-14,160;UBERON:0001007,5.92e-12,145;UBERON:0001555,5.92e-12,145;UBERON:0007026,5.92e-12,145;UBERON:0004921,1.14e-11,118;UBERON:0009569,3.27e-11,112;UBERON:0001041,3.12e-10,87;UBERON:0005911,1.29e-09,82;UBERON:0001004,1.04e-08,74;UBERON:0011216,2.31e-08,223;UBERON:0008947,2.40e-08,38;UBERON:0003258,2.40e-08,38;UBERON:0005177,2.49e-08,101;UBERON:0000065,3.25e-07,54;UBERON:0002100,6.42e-07,199;UBERON:0005181,6.67e-07,35 | |||
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| |||
|short_description=p1@ABCB6 | |||
}} |
Revision as of 08:44, 21 January 2014
Short description: | p1@ABCB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ABCB6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000427013, ENST00000439002_5end |
EntrezGene: | ABCB6 |
HGNC: | 47 |
UniProt: | B4E055 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.96e-14 | 253 |
endodermal cell | 1.94e-09 | 58 |
embryonic cell | 8.94e-09 | 250 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.51e-14 | 160 |
endoderm | 1.51e-14 | 160 |
presumptive endoderm | 1.51e-14 | 160 |
digestive system | 5.92e-12 | 145 |
digestive tract | 5.92e-12 | 145 |
primitive gut | 5.92e-12 | 145 |
subdivision of digestive tract | 1.14e-11 | 118 |
subdivision of trunk | 3.27e-11 | 112 |
foregut | 3.12e-10 | 87 |
endo-epithelium | 1.29e-09 | 82 |
respiratory system | 1.04e-08 | 74 |
organ system subdivision | 2.31e-08 | 223 |
respiratory primordium | 2.40e-08 | 38 |
endoderm of foregut | 2.40e-08 | 38 |
trunk region element | 2.49e-08 | 101 |
respiratory tract | 3.25e-07 | 54 |
trunk | 6.42e-07 | 199 |
thoracic segment organ | 6.67e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.73e-09 | 143 |
carcinoma | 3.21e-07 | 106 |
cancer | 5.62e-07 | 235 |