FFCP PHASE1:Mm9::chr10:4424133..4424155,+: Difference between revisions
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{{FFCP|EntrezGene=56533|HGNC=|MCL_coexpression_id=1|UniProt=G5E8E0,Q9QZB0,Q8BR34|association_with_transcript=0bp_to_ENSMUST00000064225,ENSMUST00000131996,NM_001161822,NM_019958,uc007egg.2,uc007egh.2_5end|description=CAGE_peak_2_at_Rgs17_5end|id=chr10:4424133..4424155,+|ontology_enrichment_celltype=CL:0000117!4.72e-11!23;CL:0000337!4.72e-11!23;CL:0000540!2.98e-09!33;CL:0000047!2.98e-09!33;CL:0000031!2.98e-09!33;CL:0000404!2.98e-09!33;CL:0000221!3.07e-07!44;CL:0000133!3.07e-07!44;CL:0002319!3.68e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,5.66e-17,23;CL:0000337,5.66e-17,23;CL:0000540,2.56e-10,33;CL:0000047,2.56e-10,33;CL:0000031,2.56e-10,33;CL:0000404,2.56e-10,33;CL:0000393,5.20e-08,39;CL:0000211,5.20e-08,39;CL:0002319,7.54e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.83e-22!75;UBERON:0001016!7.83e-22!75;UBERON:0002346!9.19e-22!71;UBERON:0003075!9.19e-22!71;UBERON:0007284!9.19e-22!71;UBERON:0001017!1.44e-21!73;UBERON:0005743!1.44e-21!73;UBERON:0001049!1.07e-20!52;UBERON:0005068!1.07e-20!52;UBERON:0006241!1.07e-20!52;UBERON:0007135!1.07e-20!52;UBERON:0000033!1.55e-19!63;UBERON:0000955!2.07e-19!50;UBERON:0006238!2.07e-19!50;UBERON:0004121!2.59e-19!102;UBERON:0000924!2.59e-19!102;UBERON:0006601!2.59e-19!102;UBERON:0002616!9.27e-19!49;UBERON:0002020!5.61e-18!34;UBERON:0003056!2.33e-17!49;UBERON:0003080!7.76e-16!40;UBERON:0002780!4.19e-15!39;UBERON:0001890!4.19e-15!39;UBERON:0006240!4.19e-15!39;UBERON:0002791!1.24e-14!29;UBERON:0003528!1.24e-14!29;UBERON:0001893!1.24e-14!29;UBERON:0007811!2.98e-12!86;UBERON:0000153!2.14e-10!94;UBERON:0000956!4.31e-10!21;UBERON:0001869!4.31e-10!21;UBERON:0000203!4.31e-10!21;UBERON:0002619!2.59e-09!17;UBERON:0002021!9.64e-09!10;UBERON:0000411!9.64e-09!10;UBERON:0001950!9.64e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.43e-32,54;UBERON:0001049,9.14e-30,52;UBERON:0005068,9.14e-30,52;UBERON:0006241,9.14e-30,52;UBERON:0007135,9.14e-30,52;UBERON:0001017,4.08e-29,73;UBERON:0002020,3.63e-28,34;UBERON:0001016,5.14e-28,75;UBERON:0002346,1.09e-23,64;UBERON:0003075,1.09e-23,64;UBERON:0007284,1.09e-23,64;UBERON:0000955,1.92e-23,47;UBERON:0006238,1.92e-23,47;UBERON:0002616,2.84e-22,46;UBERON:0004121,5.44e-22,95;UBERON:0000924,5.44e-22,95;UBERON:0006601,5.44e-22,95;UBERON:0003528,1.43e-21,29;UBERON:0002791,1.43e-21,29;UBERON:0001893,1.43e-21,29;UBERON:0010371,1.83e-19,73;UBERON:0003080,4.76e-19,40;UBERON:0002780,9.22e-18,39;UBERON:0001890,9.22e-18,39;UBERON:0006240,9.22e-18,39;UBERON:0002021,1.64e-16,10;UBERON:0000411,1.64e-16,10;UBERON:0001950,1.64e-16,10;UBERON:0003056,1.78e-15,49;UBERON:0002619,4.21e-14,17;UBERON:0010314,2.57e-13,92;UBERON:0000956,9.47e-13,21;UBERON:0001869,9.47e-13,21;UBERON:0000203,9.47e-13,21;UBERON:0003076,1.46e-11,12;UBERON:0003057,1.46e-11,12;UBERON:0002420,1.43e-10,8;UBERON:0007245,1.43e-10,8;UBERON:0010009,1.43e-10,8;UBERON:0010011,1.43e-10,8;UBERON:0000454,1.43e-10,8;UBERON:0002240,2.12e-09,6;UBERON:0005174,2.12e-09,6;UBERON:0001137,2.12e-09,6;UBERON:0000025,3.68e-08,114;UBERON:0001948,4.30e-08,5;UBERON:0002315,4.30e-08,5;UBERON:0004111,4.92e-07,122;UBERON:0000369,6.11e-07,5;UBERON:0002435,6.11e-07,5;UBERON:0000204,6.11e-07,5;UBERON:0010082,6.11e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.972149495371417,0.279972843250725,0,0,0,0,0,0,0,3.23706337375356,4.7609188134483,3.1691570175309,0,0,0,0,0,0,0,0.622137673850866,0.405017814995072,0.210324961351382,6.85562362569129,7.50953039235486,1.22490799214954,0.670918297127655,0,12.1127469099328,9.19348834213351,11.2132769277058,2.50583946687368,2.01272815925301,1.04182674111352,5.58365998002762,6.75315132038016,8.55670187550137,15.3206864446307,10.6778760599327,4.65998614563251,0.227178579999552,0.529000920747499,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.281686839553361,0,0,0,0.216491041011214,0,0.505524445014783,0.22836775943812,0,0.148442139064825,0.173485326766136,0.608930956624282,0.230615497256059,0,0.23517741427141,0,1.48316980640624,0,0,0,0,0,0,3.22058876712702,2.93225389538837,0.255457055208591,0,0,0,13.9305294646485,10.0650132620098,5.15182843662744,14.7750672163435,11.2514801225345,9.76603809429932,9.5722345209977,0.407357455401265,0,0,0.420883711772948,0.130120442962704,0.459804208866946,0.360124259610698,0.452114453507145,0.476255494059295,0.512454881139399,0.562210347358373,1.55222022443409,0.215567992932842,0,0.175951124163949,0,0,0.348252166522167,0,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0,0,0.268273401399619,0,0.16455984991348,0,0,0,0,0.268412837520744,7.57043814830858,2.26390147234426,0,0,0,0,0,0.201683524623343,0.444756087689741,0.380451252225118,0,0,0,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,0,0,0.193952487167626,0.210407459670956,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:56533 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G5E8E0,uniprot:Q9QZB0,uniprot:Q8BR34 | |||
|association_with_transcript=0bp_to_ENSMUST00000064225,ENSMUST00000131996,NM_001161822,NM_019958,uc007egg.2,uc007egh.2_5end | |||
|cluster_id=chr10:4424133..4424155,+ | |||
|description=CAGE_peak_2_at_Rgs17_5end | |||
|id=chr10:4424133..4424155,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.72e-11!23;CL:0000337!4.72e-11!23;CL:0000540!2.98e-09!33;CL:0000047!2.98e-09!33;CL:0000031!2.98e-09!33;CL:0000404!2.98e-09!33;CL:0000221!3.07e-07!44;CL:0000133!3.07e-07!44;CL:0002319!3.68e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.66e-17,23;CL:0000337,5.66e-17,23;CL:0000540,2.56e-10,33;CL:0000047,2.56e-10,33;CL:0000031,2.56e-10,33;CL:0000404,2.56e-10,33;CL:0000393,5.20e-08,39;CL:0000211,5.20e-08,39;CL:0002319,7.54e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.83e-22!75;UBERON:0001016!7.83e-22!75;UBERON:0002346!9.19e-22!71;UBERON:0003075!9.19e-22!71;UBERON:0007284!9.19e-22!71;UBERON:0001017!1.44e-21!73;UBERON:0005743!1.44e-21!73;UBERON:0001049!1.07e-20!52;UBERON:0005068!1.07e-20!52;UBERON:0006241!1.07e-20!52;UBERON:0007135!1.07e-20!52;UBERON:0000033!1.55e-19!63;UBERON:0000955!2.07e-19!50;UBERON:0006238!2.07e-19!50;UBERON:0004121!2.59e-19!102;UBERON:0000924!2.59e-19!102;UBERON:0006601!2.59e-19!102;UBERON:0002616!9.27e-19!49;UBERON:0002020!5.61e-18!34;UBERON:0003056!2.33e-17!49;UBERON:0003080!7.76e-16!40;UBERON:0002780!4.19e-15!39;UBERON:0001890!4.19e-15!39;UBERON:0006240!4.19e-15!39;UBERON:0002791!1.24e-14!29;UBERON:0003528!1.24e-14!29;UBERON:0001893!1.24e-14!29;UBERON:0007811!2.98e-12!86;UBERON:0000153!2.14e-10!94;UBERON:0000956!4.31e-10!21;UBERON:0001869!4.31e-10!21;UBERON:0000203!4.31e-10!21;UBERON:0002619!2.59e-09!17;UBERON:0002021!9.64e-09!10;UBERON:0000411!9.64e-09!10;UBERON:0001950!9.64e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.43e-32,54;UBERON:0001049,9.14e-30,52;UBERON:0005068,9.14e-30,52;UBERON:0006241,9.14e-30,52;UBERON:0007135,9.14e-30,52;UBERON:0001017,4.08e-29,73;UBERON:0002020,3.63e-28,34;UBERON:0001016,5.14e-28,75;UBERON:0002346,1.09e-23,64;UBERON:0003075,1.09e-23,64;UBERON:0007284,1.09e-23,64;UBERON:0000955,1.92e-23,47;UBERON:0006238,1.92e-23,47;UBERON:0002616,2.84e-22,46;UBERON:0004121,5.44e-22,95;UBERON:0000924,5.44e-22,95;UBERON:0006601,5.44e-22,95;UBERON:0003528,1.43e-21,29;UBERON:0002791,1.43e-21,29;UBERON:0001893,1.43e-21,29;UBERON:0010371,1.83e-19,73;UBERON:0003080,4.76e-19,40;UBERON:0002780,9.22e-18,39;UBERON:0001890,9.22e-18,39;UBERON:0006240,9.22e-18,39;UBERON:0002021,1.64e-16,10;UBERON:0000411,1.64e-16,10;UBERON:0001950,1.64e-16,10;UBERON:0003056,1.78e-15,49;UBERON:0002619,4.21e-14,17;UBERON:0010314,2.57e-13,92;UBERON:0000956,9.47e-13,21;UBERON:0001869,9.47e-13,21;UBERON:0000203,9.47e-13,21;UBERON:0003076,1.46e-11,12;UBERON:0003057,1.46e-11,12;UBERON:0002420,1.43e-10,8;UBERON:0007245,1.43e-10,8;UBERON:0010009,1.43e-10,8;UBERON:0010011,1.43e-10,8;UBERON:0000454,1.43e-10,8;UBERON:0002240,2.12e-09,6;UBERON:0005174,2.12e-09,6;UBERON:0001137,2.12e-09,6;UBERON:0000025,3.68e-08,114;UBERON:0001948,4.30e-08,5;UBERON:0002315,4.30e-08,5;UBERON:0004111,4.92e-07,122;UBERON:0000369,6.11e-07,5;UBERON:0002435,6.11e-07,5;UBERON:0000204,6.11e-07,5;UBERON:0010082,6.11e-07,5 | |||
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|short_description=p2@Rgs17 | |||
}} |
Revision as of 10:07, 4 August 2015
Short description: | p2@Rgs17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rgs17_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000064225, ENSMUST00000131996, NM_001161822, NM_019958, uc007egg.2, uc007egh.2_5end |
EntrezGene: | 56533 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.66e-17 | 23 |
neuroblast (sensu Vertebrata) | 5.66e-17 | 23 |
neuron | 2.56e-10 | 33 |
neuronal stem cell | 2.56e-10 | 33 |
neuroblast | 2.56e-10 | 33 |
electrically signaling cell | 2.56e-10 | 33 |
electrically responsive cell | 5.20e-08 | 39 |
electrically active cell | 5.20e-08 | 39 |
neural cell | 7.54e-07 | 43 |