FFCP PHASE1:Hg19::chr22:44319648..44319692,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80339 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18590 | |||
|TSSclassifier=strong | |||
|UniProt=F8W8E5 | |||
|association_with_transcript=0bp_to_ENST00000406117,ENST00000423180_5end | |||
|description=CAGE_peak_1_at_PNPLA3_5end | |||
|id=chr22:44319648..44319692,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.25e-20!180;CL:0002321!1.31e-15!248;CL:0000220!4.03e-15!246;CL:0000221!5.16e-12!71;CL:0000057!1.32e-10!75;CL:0000325!3.66e-10!39;CL:0000066!7.05e-10!254;CL:0000133!1.64e-09!59;CL:0000548!2.98e-09!679;CL:0000004!2.98e-09!679;CL:0000255!2.98e-09!679;CL:0000012!1.29e-08!682;CL:0000144!6.18e-08!625;CL:0002371!1.66e-07!591;CL:0000075!1.71e-07!27;CL:0000147!1.91e-07!14;CL:0002077!2.00e-07!33;CL:0000333!5.30e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000075;7.51e-08;27!CL:0000147;7.81e-08;14!CL:0002077;1.71e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.99e-13,250;CL:0000221,2.09e-12,72;CL:0000057,3.61e-11,76;CL:0000133,2.32e-09,59;CL:0002077,3.14e-08,34;CL:0000075,7.23e-08,27;CL:0000147,7.52e-08,14;CL:0000333,7.57e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.86e-26!365;UBERON:0000481!4.12e-18!347;UBERON:0000468!2.52e-17!659;UBERON:0000483!1.27e-16!309;UBERON:0000119!1.31e-16!312;UBERON:0005256!6.20e-16!143;UBERON:0000467!1.37e-14!625;UBERON:0000480!2.78e-14!626;UBERON:0002100!4.99e-13!216;UBERON:0000922!5.57e-12!612;UBERON:0000064!2.25e-11!219;UBERON:0000924!6.35e-11!173;UBERON:0006601!6.35e-11!173;UBERON:0004121!7.37e-11!169;UBERON:0000923!8.00e-11!604;UBERON:0005291!8.00e-11!604;UBERON:0006598!8.00e-11!604;UBERON:0002532!8.00e-11!604;UBERON:0002050!9.09e-11!605;UBERON:0005423!9.09e-11!605;UBERON:0003104!1.86e-10!238;UBERON:0009142!1.86e-10!238;UBERON:0000062!2.34e-10!511;UBERON:0005085!5.47e-10!29;UBERON:0003102!7.69e-10!95;UBERON:0000033!1.12e-09!123;UBERON:0002199!3.70e-09!45;UBERON:0002416!3.70e-09!45;UBERON:0000914!5.36e-09!83;UBERON:0002329!5.36e-09!83;UBERON:0003077!5.36e-09!83;UBERON:0003059!5.36e-09!83;UBERON:0007282!5.36e-09!83;UBERON:0009618!5.36e-09!83;UBERON:0007285!5.36e-09!83;UBERON:0000970!1.22e-08!20;UBERON:0001444!1.61e-08!48;UBERON:0002107!3.07e-08!19;UBERON:0006925!3.07e-08!19;UBERON:0008836!3.07e-08!19;UBERON:0000019!3.23e-08!19;UBERON:0000047!3.23e-08!19;UBERON:0004088!3.23e-08!19;UBERON:0003072!3.23e-08!19;UBERON:0003071!3.23e-08!19;UBERON:0004128!3.23e-08!19;UBERON:0008835!6.32e-08!22;UBERON:0003894!6.32e-08!22;UBERON:0000153!6.79e-08!129;UBERON:0007811!6.79e-08!129;UBERON:0002097!7.21e-08!40;UBERON:0009497!9.73e-08!25;UBERON:0000015!9.73e-08!25;UBERON:0002423!9.73e-08!25;UBERON:0006235!9.73e-08!25;UBERON:0004161!9.73e-08!25;UBERON:0009854!1.28e-07!23;UBERON:0002104!1.33e-07!21;UBERON:0000477!1.51e-07!286;UBERON:0002417!1.56e-07!61;UBERON:0000916!1.56e-07!61;UBERON:0001048!2.25e-07!168;UBERON:0007499!2.93e-07!25;UBERON:0005172!3.56e-07!55;UBERON:0005173!3.56e-07!55;UBERON:0000466!3.87e-07!126;UBERON:0009856!5.17e-07!26;UBERON:0001456!8.25e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000970;1.97e-09;20!UBERON:0000019;5.75e-09;19!UBERON:0000047;5.75e-09;19!UBERON:0004088;5.75e-09;19!UBERON:0010230;5.75e-09;19!UBERON:0002107;1.02e-08;19!UBERON:0006925;1.02e-08;19!UBERON:0010371;1.38e-08;31!UBERON:0002104;1.72e-08;21!UBERON:0001456;1.02e-07;21!UBERON:0003102;1.94e-07;50!UBERON:0002423;2.11e-07;25!UBERON:0002097;4.50e-07;41!UBERON:0002199;5.05e-07;46!UBERON:0002416;5.05e-07;46!UBERON:0000020;6.57e-07;23!UBERON:0006876;8.47e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000483,1.89e-13,306;UBERON:0000119,2.37e-13,309;UBERON:0003104,9.50e-11,160;UBERON:0009142,9.50e-11,160;UBERON:0003102,2.38e-10,99;UBERON:0002199,5.10e-10,46;UBERON:0002416,5.10e-10,46;UBERON:0005085,6.13e-10,31;UBERON:0005256,8.12e-10,122;UBERON:0004121,1.43e-09,171;UBERON:0000924,1.43e-09,171;UBERON:0006601,1.43e-09,171;UBERON:0002097,1.23e-08,41;UBERON:0002107,1.27e-08,19;UBERON:0006925,1.27e-08,19;UBERON:0008836,1.27e-08,19;UBERON:0002100,1.79e-08,199;UBERON:0000970,2.09e-08,21;UBERON:0002104,2.09e-08,21;UBERON:0000019,5.81e-08,20;UBERON:0000047,5.81e-08,20;UBERON:0010312,5.81e-08,20;UBERON:0004088,5.81e-08,20;UBERON:0010230,5.81e-08,20;UBERON:0003072,5.81e-08,20;UBERON:0004128,5.81e-08,20;UBERON:0003071,5.81e-08,20;UBERON:0008835,6.50e-08,22;UBERON:0003894,6.50e-08,22;UBERON:0001444,6.58e-08,49;UBERON:0000033,8.43e-08,56;UBERON:0007503,1.19e-07,78;UBERON:0000490,1.29e-07,148;UBERON:0009854,1.32e-07,23;UBERON:0009497,1.76e-07,25;UBERON:0000015,1.76e-07,25;UBERON:0002423,1.76e-07,25;UBERON:0006235,1.76e-07,25;UBERON:0004161,1.76e-07,25;UBERON:0002417,3.32e-07,60;UBERON:0000916,3.32e-07,60;UBERON:0000922,4.49e-07,592;UBERON:0007499,4.90e-07,25;UBERON:0009856,8.48e-07,26;UBERON:0001456,8.85e-07,22;UBERON:0006876,9.33e-07,11 | |||
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| |||
|short_description=p1@PNPLA3 | |||
}} |
Revision as of 16:27, 21 January 2014
Short description: | p1@PNPLA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PNPLA3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000406117, ENST00000423180_5end |
EntrezGene: | PNPLA3 |
HGNC: | 18590 |
UniProt: | F8W8E5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.99e-13 | 250 |
ectodermal cell | 2.09e-12 | 72 |
fibroblast | 3.61e-11 | 76 |
neurectodermal cell | 2.32e-09 | 59 |
ecto-epithelial cell | 3.14e-08 | 34 |
columnar/cuboidal epithelial cell | 7.23e-08 | 27 |
pigment cell | 7.52e-08 | 14 |
migratory neural crest cell | 7.57e-07 | 41 |