FFCP PHASE1:Hg19::chr20:5903492..5903502,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C377 | |||
|description=CAGE_peak_at_chr20:5903492..5903502,- | |||
|id=chr20:5903492..5903502,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;5.16e-21;1!CL:0000164;5.16e-21;1!CL:0000502;5.16e-21;1!CL:0000172;5.16e-21;1!CL:0000173;5.16e-21;1!CL:0002535;3.34e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,4.22e-21,1;CL:0000164,4.22e-21,1;CL:0000502,4.22e-21,1;CL:0000172,4.22e-21,1;CL:0000173,4.22e-21,1;CL:0002351,4.22e-21,1;CL:0002535,3.35e-11,2 | |||
|ontology_enrichment_development_v019=CL:0002351;5.16e-21;1!UBERON:0006215;6.78e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;5.16e-21;1!DOID:169;3.97e-14;6!DOID:3119;1.54e-13;14!DOID:171;7.36e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,4.22e-21,1;DOID:169,3.25e-14,6;DOID:3119,1.75e-13,14;DOID:171,6.54e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.25e-21!57;UBERON:0005068!3.25e-21!57;UBERON:0006241!3.25e-21!57;UBERON:0007135!3.25e-21!57;UBERON:0005743!3.31e-21!86;UBERON:0000955!9.56e-21!69;UBERON:0006238!9.56e-21!69;UBERON:0000073!1.20e-20!94;UBERON:0001016!1.20e-20!94;UBERON:0001017!1.63e-20!82;UBERON:0002616!4.23e-18!59;UBERON:0003075!1.47e-17!86;UBERON:0007284!1.47e-17!86;UBERON:0002346!1.48e-16!90;UBERON:0007023!2.56e-16!115;UBERON:0002020!2.67e-14!34;UBERON:0003528!2.67e-14!34;UBERON:0001950!2.85e-14!20;UBERON:0002780!8.67e-14!41;UBERON:0001890!8.67e-14!41;UBERON:0006240!8.67e-14!41;UBERON:0003080!2.11e-13!42;UBERON:0000988!2.74e-13!3;UBERON:0000033!2.85e-13!123;UBERON:0002619!6.86e-13!22;UBERON:0001869!9.08e-13!32;UBERON:0000153!2.09e-12!129;UBERON:0007811!2.09e-12!129;UBERON:0004121!3.66e-12!169;UBERON:0001893!6.51e-12!34;UBERON:0000924!9.69e-12!173;UBERON:0006601!9.69e-12!173;UBERON:0003056!1.70e-11!61;UBERON:0000956!3.22e-11!25;UBERON:0000203!3.22e-11!25;UBERON:0002791!3.91e-10!33;UBERON:0000007!6.76e-10!2;UBERON:0003076!1.68e-09!15;UBERON:0003057!1.68e-09!15;UBERON:0001870!1.97e-09!2;UBERON:0002148!2.99e-09!2;UBERON:0009662!2.99e-09!2;UBERON:0004733!1.39e-08!12;UBERON:0002028!1.39e-08!12;UBERON:0007277!1.39e-08!12;UBERON:0002298!1.87e-08!8;UBERON:0001872!4.50e-08!5;UBERON:0004732!6.71e-08!13;UBERON:0002680!8.51e-08!9;UBERON:0001895!8.51e-08!9;UBERON:0010092!8.51e-08!9;UBERON:0000200!6.88e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;2.23e-11;2!UBERON:0006955;3.34e-11;2!UBERON:0004801;3.34e-11;2!UBERON:0002114;6.78e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.23e-11,2;UBERON:0006955,3.35e-11,2;UBERON:0004801,3.35e-11,2;UBERON:0002114,7.76e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,1.25966373927138,0,0,0,0,0,0,0,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,1.03423011972439,0,0.173624994933292,0,0,0,0,1.77328571372128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,0,0,0,0.789168805698781,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0.686379991447858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0.886068179966986,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,1.41972529649618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.202612753855184,0,0.413373593002368,0.19024743058172,0,0,0,0,0,0,0,4.24875922965642,0.682986574053893,0,0,0,0.815636795721981,0.328863867814245,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0.316027223465453,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,8.35593255677747,0,0,0,0.603851374266694,0,0,5.17349025997675,0,1.41405928260976,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:5903492..5903502,- | |||
}} |
Revision as of 10:08, 21 January 2014
Short description: | p@chr20:5903492..5903502, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr20:5903492..5903502, - |
Coexpression cluster: | C377_pituitary_small_smallcell_cerebellum_pineal_pons_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 4.22e-21 | 1 |
enteroendocrine cell | 4.22e-21 | 1 |
type D enteroendocrine cell | 4.22e-21 | 1 |
somatostatin secreting cell | 4.22e-21 | 1 |
pancreatic D cell | 4.22e-21 | 1 |
progenitor cell of endocrine pancreas | 4.22e-21 | 1 |
epithelial cell of cervix | 3.35e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 2.23e-11 | 2 |
uterine epithelium | 3.35e-11 | 2 |
cervix epithelium | 3.35e-11 | 2 |
duodenum | 7.76e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 4.22e-21 | 1 |
neuroendocrine tumor | 3.25e-14 | 6 |
gastrointestinal system cancer | 1.75e-13 | 14 |
neuroectodermal tumor | 6.54e-09 | 10 |