FFCP PHASE1:Hg19::chr20:55204351..55204377,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7022 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11744 | |||
|TSSclassifier=strong | |||
|UniProt=Q92754 | |||
|association_with_transcript=0bp_to_ENST00000201031,NM_003222,uc002xya.2_5end | |||
|coexpression_cluster_id=C4049 | |||
|description=CAGE_peak_1_at_TFAP2C_5end | |||
|id=chr20:55204351..55204377,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.32e-15!254;CL:0002076!1.08e-12!43;CL:0000221!3.74e-11!71;CL:0002077!1.06e-08!33;CL:0002251!5.18e-08!21;CL:0000133!7.63e-08!59;CL:0000223!4.29e-07!59;CL:0002620!9.31e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.94e-09;42!CL:0002077;3.53e-09;34!CL:0002251;6.18e-09;20!CL:0000710;1.87e-07;20!CL:0000039;3.15e-07;7!CL:0000586;3.15e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.03e-17,253;CL:0000221,3.47e-13,72;CL:0002076,2.29e-12,42;CL:0002077,2.13e-10,34;CL:0000133,4.84e-09,59;CL:0002251,5.82e-09,20;CL:0000223,8.74e-08,58;CL:0000710,1.93e-07,20;CL:0000039,3.12e-07,7;CL:0000586,3.12e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.36e-09!106;DOID:0050687!3.05e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.62e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.60e-10,106;DOID:0050687,1.91e-08,143;DOID:1749,1.81e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003102!7.20e-24!95;UBERON:0000062!3.55e-16!511;UBERON:0004121!8.85e-16!169;UBERON:0000924!2.77e-15!173;UBERON:0006601!2.77e-15!173;UBERON:0000165!7.88e-15!28;UBERON:0000930!7.88e-15!28;UBERON:0004119!8.83e-15!169;UBERON:0000925!8.83e-15!169;UBERON:0006595!8.83e-15!169;UBERON:0001007!1.78e-12!155;UBERON:0001555!1.78e-12!155;UBERON:0007026!1.78e-12!155;UBERON:0000161!4.36e-12!35;UBERON:0002097!9.92e-12!40;UBERON:0000166!1.86e-11!21;UBERON:0000033!1.44e-10!123;UBERON:0000153!1.91e-10!129;UBERON:0007811!1.91e-10!129;UBERON:0000064!2.25e-10!219;UBERON:0001004!4.64e-10!72;UBERON:0001444!6.99e-10!48;UBERON:0000475!1.42e-09!365;UBERON:0002199!2.90e-09!45;UBERON:0002416!2.90e-09!45;UBERON:0000077!1.21e-08!130;UBERON:0005156!1.69e-08!59;UBERON:0000990!1.69e-08!59;UBERON:0005631!4.13e-08!14;UBERON:0000158!4.13e-08!14;UBERON:0000468!8.57e-08!659;UBERON:0003133!1.96e-07!48;UBERON:0004923!4.67e-07!57;UBERON:0000078!6.37e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;5.50e-17;28!UBERON:0000344;3.45e-12;20!UBERON:0000161;5.44e-12;19!UBERON:0000166;5.44e-12;19!UBERON:0002097;1.02e-10;41!UBERON:0003729;4.66e-09;13!UBERON:0003102;6.88e-09;50!UBERON:0001555;2.50e-08;54!UBERON:0007811;2.57e-08;52!UBERON:0002199;9.69e-08;46!UBERON:0002416;9.69e-08;46!UBERON:0001444;1.03e-07;48!UBERON:0004923;1.31e-07;55!UBERON:0000033;1.77e-07;50!UBERON:0000153;6.86e-07;54!UBERON:0001828;9.63e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,7.64e-28,99;UBERON:0000165,2.04e-17,29;UBERON:0000930,2.04e-17,29;UBERON:0000161,9.28e-14,36;UBERON:0000166,1.73e-13,22;UBERON:0002097,6.60e-13,41;UBERON:0004119,2.88e-12,160;UBERON:0000925,2.88e-12,160;UBERON:0006595,2.88e-12,160;UBERON:0000344,3.33e-12,20;UBERON:0001444,2.71e-11,49;UBERON:0004923,2.84e-11,66;UBERON:0000033,1.01e-10,56;UBERON:0002199,1.18e-10,46;UBERON:0002416,1.18e-10,46;UBERON:0001007,5.47e-10,145;UBERON:0001555,5.47e-10,145;UBERON:0007026,5.47e-10,145;UBERON:0004121,6.71e-10,171;UBERON:0000924,6.71e-10,171;UBERON:0006601,6.71e-10,171;UBERON:0000153,1.03e-09,62;UBERON:0007811,1.03e-09,62;UBERON:0003729,4.46e-09,13;UBERON:0001004,8.27e-09,74;UBERON:0005631,1.99e-08,14;UBERON:0000158,1.99e-08,14;UBERON:0005156,4.62e-07,59;UBERON:0000990,4.62e-07,59;UBERON:0001828,9.42e-07,8 | |||
|phase1_expression=0,0.214100523890983,0,1.0007329835313,0,0,0,0,1.30592814099919,0.491467873003018,1.39560233594486,33.2030885637862,31.6520373874144,0,0,0,0,0,0,48.3865758241776,22.2360753456236,28.524379654506,20.6089910734361,21.8999080116615,20.8400781727373,0,0,0.0787107813136792,0,0,1.39334510984468,3.67768489791571,6.6265302131215,4.80680213216824,0,0,0,0,0,0,1.11957737119962,0.647787332037959,2.31818010870768,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.44076983047484,14.5718115317017,16.3145154825149,0,0,0.398873881556595,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8271977728462,0.496971951695318,0,0,0,0.709336764396714,0,0,0,0,0.404132016209064,0,3.17850598054356,0.576175924479999,13.1220001826926,7.80400192075801,13.6913237170668,10.4614076386261,15.971091815552,24.4428145995879,22.3316782656575,42.6682217922727,54.0470996171779,45.8766468420399,79.5961914378976,45.2498480579759,0.910161361938026,0,41.9156923745625,26.6502447327284,52.6421819419948,13.1693286264251,16.243853177348,24.0380894250555,0,10.5839885056429,13.8812302732069,16.3187563892863,16.5050102846421,12.0571459208974,9.01741890159702,8.93360910391631,0.337552664482532,0.389748020644795,10.3497847440087,12.4267363167104,0.161646056818812,14.5553932931812,12.1910038855445,5.4259389539356,19.9058678758196,8.18238361772504,16.9214711279512,16.2225029152362,14.1806852103989,21.7282673165999,21.1468552231356,27.7552935963191,5.83963774521328,78.224766164908,79.1186353977249,161.617857982402,6.03678306441573,6.49691533502627,0.828147600278907,0.674338760312407,0.723033089650446,1.21323370005633,1.52515610864684,0.71181185733329,1.21348177344148,0.98110732562673,0.38474715694639,0,0,0,0,0,0,0,0,46.1206644536676,0,8.78002283269004,13.4882103909143,14.7777589445097,6.94413338688972,29.6485557832395,3.11980435583874,0,2.08674728955138,0.117408694235822,0,0,0,177.005785142878,167.4048016085,0,0.468008530278475,0,3.74935335947108,7.22323151255096,5.67100388969546,8.77673522487913,4.94077695473735,32.2041450498777,0,0,0.414656231081544,1.29707958075265,1.8936365013957,4.508350494744,31.705039321337,21.0991404978085,18.8179690624976,11.1053692119589,6.60754727256618,6.28818151787272,9.4190110850103,0.43596006883328,6.67378400970645,0,3.57656445851882,0,0.797814349754612,1.04007436911366,0,0,0,1.00084595560703,0,0,0,2.84313558994037,0,2.71295439353627,1.74306691720059,1.69954085009497,0,0,0,0.239624855491583,1.14861935834114,0,1.30303176000821,0,0,0,0,0,0,15.7538667017927,13.0139853857622,25.5185308216639,3.85287410269002,19.1381625495949,0,0,0,0,0.500170521059677,0,51.9927153827018,50.8522618071911,33.5906144022281,38.5395255326026,0,0,0,0,0,7.81952530212746,3.32861967686659,4.46086450954113,0,0,0,17.8845267153293,6.65741758041988,30.8438099196274,0,1.38115775959256,1.12264037773229,0,0.511707249066704,0.160853921143607,0,0,0,0.0821271560138091,0,0,38.4333049701359,20.0506470303285,8.74769394891015,0.114814448164607,0,0.262248829918848,0,0.231046011313244,0,0,0,0,0,0.647747748306418,1.54227252690289,0.270946437543853,0,0.254876273045038,0,0.447749509444357,0,0,0,0,0,22.3598995275557,0,0,16.653700601889,15.6014459048765,0,0,0,0,0,0,0,0.170453254832202,0,3.47098322258054,8.64855303142978,6.12541019974004,6.37294019389965,0,0,0,0.616067160352178,0,0,0,0,2.97726695487734,0,0.38126038784765,0,0,0,0,0.179872457583315,0,0.353437207037059,0,0,0,0,0,0,4.50449707646353,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,2.83808851256478,0,0,16.3173464719257,4.89908608342976,5.38843831262868,7.37332503089366,4.3556393944529,20.8057799716682,3.87454835404107,5.05414427002877,7.09488245658681,2.29723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,16.1726542547481,0,0,0,0.797131363644112,0,0,0,0,0,0,0,0,0,0,0,1.27753871307098,0,0,1.3420566473545,0.500547425135725,0,0,0,0,0,0,5.23993513143015,0.146508179271894,0,0,11.3654458722565,49.8975973101772,42.7629140399,37.1664449540071,0.994147647766298,1.40669416410513,0,0,1.05562704063997,3.38721580026819,0.276283915531148,0,11.7608984877478,0,19.9065336103557,0,10.3832281311853,0,2.17015492401254,0,0,0,1.39152147242777,3.99227596002388,135.422435764321,25.8006999988777,25.3749851402178,15.93108275997,22.882828526349,34.5126015381187,0,0,2.60437492399938,0,0.361789315876224,0,0.884634079449797,0.295547618953547,0.658156191461918,0.544692317594951,53.6781415472623,26.7786899593214,0,289.127136102627,124.314337507534,233.048612772707,65.3952377450435,31.7843649104462,68.2284513303852,2.04386596391473,0,0,0.451191321234361,0.392125068635479,0,0,0,0,4.40728582029699,19.7894300007517,4.760550074326,2.98578579323551,3.80367527364358,2.4441205797345,0,0,0,0.539209063845416,0,0.234264445725339,0,55.3730871577814,0,11.4429476826323,0,12.2429104652196,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| |||
|short_description=p1@TFAP2C | |||
}} |
Revision as of 12:22, 21 January 2014
Short description: | p1@TFAP2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TFAP2C_5end |
Coexpression cluster: | C4049_choriocarcinoma_MCF7_pancreatic_Hair_breast_testicular_gall |
Association with transcript: | 0bp_to_ENST00000201031, NM_003222, uc002xya.2_5end |
EntrezGene: | TFAP2C |
HGNC: | 11744 |
UniProt: | Q92754 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.03e-17 | 253 |
ectodermal cell | 3.47e-13 | 72 |
endo-epithelial cell | 2.29e-12 | 42 |
ecto-epithelial cell | 2.13e-10 | 34 |
neurectodermal cell | 4.84e-09 | 59 |
epithelial cell of alimentary canal | 5.82e-09 | 20 |
endodermal cell | 8.74e-08 | 58 |
neurecto-epithelial cell | 1.93e-07 | 20 |
germ line cell | 3.12e-07 | 7 |
germ cell | 3.12e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
surface structure | 7.64e-28 | 99 |
mouth | 2.04e-17 | 29 |
stomodeum | 2.04e-17 | 29 |
orifice | 9.28e-14 | 36 |
oral opening | 1.73e-13 | 22 |
skin of body | 6.60e-13 | 41 |
endoderm-derived structure | 2.88e-12 | 160 |
endoderm | 2.88e-12 | 160 |
presumptive endoderm | 2.88e-12 | 160 |
mucosa | 3.33e-12 | 20 |
subdivision of head | 2.71e-11 | 49 |
organ component layer | 2.84e-11 | 66 |
head | 1.01e-10 | 56 |
integument | 1.18e-10 | 46 |
integumental system | 1.18e-10 | 46 |
digestive system | 5.47e-10 | 145 |
digestive tract | 5.47e-10 | 145 |
primitive gut | 5.47e-10 | 145 |
ectoderm-derived structure | 6.71e-10 | 171 |
ectoderm | 6.71e-10 | 171 |
presumptive ectoderm | 6.71e-10 | 171 |
anterior region of body | 1.03e-09 | 62 |
craniocervical region | 1.03e-09 | 62 |
mouth mucosa | 4.46e-09 | 13 |
respiratory system | 8.27e-09 | 74 |
extraembryonic membrane | 1.99e-08 | 14 |
membranous layer | 1.99e-08 | 14 |
reproductive structure | 4.62e-07 | 59 |
reproductive system | 4.62e-07 | 59 |
gingiva | 9.42e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.60e-10 | 106 |
cell type cancer | 1.91e-08 | 143 |
squamous cell carcinoma | 1.81e-07 | 14 |