FFCP PHASE1:Hg19::chr20:52687046..52687058,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8537 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=974 | |||
|TSSclassifier=strong | |||
|UniProt=B4E2C4 | |||
|association_with_transcript=-16bp_to_ENST00000411563_5end | |||
|coexpression_cluster_id=C238 | |||
|description=CAGE_peak_7_at_BCAS1_5end | |||
|id=chr20:52687046..52687058,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;8.35e-13;1!UBERON:0006595;2.92e-07;86 | |||
|ontology_enrichment_disease=DOID:5093!9.56e-14!4;DOID:1612!9.56e-14!4;DOID:7!1.47e-09!39 | |||
|ontology_enrichment_disease_v019=DOID:5093;7.11e-12;4!DOID:1612;7.11e-12;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,7.12e-12,4;DOID:1612,7.12e-12,4 | |||
|ontology_enrichment_uberon=UBERON:0004921!3.82e-25!129;UBERON:0004185!3.82e-25!129;UBERON:0001007!2.59e-22!155;UBERON:0001555!2.59e-22!155;UBERON:0007026!2.59e-22!155;UBERON:0004119!1.08e-19!169;UBERON:0000925!1.08e-19!169;UBERON:0006595!1.08e-19!169;UBERON:0000077!2.03e-14!130;UBERON:0005409!1.12e-13!35;UBERON:0000160!5.02e-13!27;UBERON:0000059!4.62e-11!11;UBERON:0001041!8.06e-10!98;UBERON:0007023!8.16e-10!115;UBERON:0001155!1.47e-09!9;UBERON:0000161!2.89e-09!35;UBERON:0003127!2.78e-08!2;UBERON:0000341!5.04e-08!2;UBERON:0001046!7.86e-08!19;UBERON:0001829!9.34e-08!2;UBERON:0000481!2.96e-07!347;UBERON:0000166!8.03e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.01e-38;17!UBERON:0005409;5.66e-38;22!UBERON:0004921;4.79e-29;33!UBERON:0002108;1.17e-20;4!UBERON:0000059;1.92e-16;11!UBERON:0000996;2.91e-12;1!UBERON:0001155;1.11e-11;9!UBERON:0001555;1.50e-11;54!UBERON:0003127;6.61e-07;2!UBERON:0001007;7.68e-07;81!UBERON:0000341;9.27e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.87e-38,17;UBERON:0005409,1.66e-33,25;UBERON:0002108,1.02e-20,4;UBERON:0000059,1.92e-16,11;UBERON:0004921,6.72e-14,118;UBERON:0001007,6.03e-13,145;UBERON:0001555,6.03e-13,145;UBERON:0007026,6.03e-13,145;UBERON:0000996,1.75e-12,1;UBERON:0001155,1.13e-11,9;UBERON:0004119,1.49e-11,160;UBERON:0000925,1.49e-11,160;UBERON:0006595,1.49e-11,160;UBERON:0011216,1.40e-07,223;UBERON:0003127,6.42e-07,2;UBERON:0000341,9.02e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,1.59884970106048,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0.552567831062295,0,0,0,0,0.0898683511473268,0.537063524026827,0,0.295930216910801,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,1.99052386215701,1.41532103205343,5.49927130440263,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,5.54977786322317,0,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.236349546921671,0.412079291905832,0.606631894687664,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.320362237703084,0.471612915298998,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.992422356778588,0,0.894336993477167,0,0,0,0,0,0,0,0,0,0,0,1.56986185701028,0,0,3.65263488203798,0,0,0,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70109553377806,1.96703604453562,0.940634592723046,0.245148321753905,0,0,0,0,0,0,0,0,0.357107877211315,0,0,16.0674005414234,0.458729283404541,0,0,0,0,4.7612415646386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70587185520785,0.476128862927481,0,0,0,0,0,0.217716747896961,0.342233301085281,0.471464371102113,2.79716601031438,0.99798106963804,0,0,0,0,0,0,0,1.99727032255654,0,0 | |||
|short_description=p7@BCAS1 | |||
}} |
Revision as of 12:19, 21 January 2014
Short description: | p7@BCAS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_BCAS1_5end |
Coexpression cluster: | C238_stomach_gall_breast_duodenum_temporal_MCF7_smallcell |
Association with transcript: | -16bp_to_ENST00000411563_5end |
EntrezGene: | BCAS1 |
HGNC: | 974 |
UniProt: | B4E2C4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.87e-38 | 17 |
gastrointestinal system | 1.66e-33 | 25 |
small intestine | 1.02e-20 | 4 |
large intestine | 1.92e-16 | 11 |
subdivision of digestive tract | 6.72e-14 | 118 |
digestive system | 6.03e-13 | 145 |
digestive tract | 6.03e-13 | 145 |
primitive gut | 6.03e-13 | 145 |
vagina | 1.75e-12 | 1 |
colon | 1.13e-11 | 9 |
endoderm-derived structure | 1.49e-11 | 160 |
endoderm | 1.49e-11 | 160 |
presumptive endoderm | 1.49e-11 | 160 |
organ system subdivision | 1.40e-07 | 223 |
open tracheal system trachea | 6.42e-07 | 2 |
throat | 9.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 7.12e-12 | 4 |
breast cancer | 7.12e-12 | 4 |