FFCP PHASE1:Hg19::chr20:26116596..26116611,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2254 | |||
|description=CAGE_peak_at_chr20:26116596..26116611,+ | |||
|id=chr20:26116596..26116611,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000054;6.85e-14;2!CL:0000137;6.85e-14;2!CL:0000092;6.85e-14;2!CL:1000415;6.85e-14;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,6.43e-14,2;CL:0000054,7.30e-14,2;CL:0000137,7.30e-14,2;CL:0000092,7.30e-14,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1115!1.85e-15!20;DOID:162!8.74e-15!235;DOID:14566!2.41e-14!239;DOID:0050687!2.79e-11!143;DOID:0050686!2.82e-09!137;DOID:1325!5.01e-07!7;DOID:3904!5.01e-07!7;DOID:0060085!5.90e-07!1;DOID:3165!5.90e-07!1;DOID:0060121!5.90e-07!1;DOID:2438!5.90e-07!1;DOID:4418!5.90e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060085;2.45e-26;1!DOID:3165;2.45e-26;1!DOID:0060121;2.45e-26;1!DOID:2438;2.45e-26;1!DOID:4418;2.45e-26;1!DOID:200;6.85e-14;2!DOID:4305;6.85e-14;2!DOID:0060058;7.29e-11;10!DOID:0060072;1.36e-07;4!DOID:5093;1.75e-07;4!DOID:1612;1.75e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,2.78e-26,1;DOID:3165,2.78e-26,1;DOID:0060121,2.78e-26,1;DOID:2438,2.78e-26,1;DOID:4418,2.78e-26,1;DOID:200,7.30e-14,2;DOID:4305,7.30e-14,2;DOID:0060058,5.98e-11,10;DOID:0060072,1.40e-07,4;DOID:5093,1.92e-07,4;DOID:1612,1.92e-07,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002110;1.05e-09;3!UBERON:0002106;1.47e-09;3!UBERON:0000014;1.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,1.01e-09,3;UBERON:0006242,1.01e-09,3;UBERON:0002106,1.30e-09,3;UBERON:0004854,1.30e-09,3;UBERON:0009034,1.30e-09,3;UBERON:0002095,1.30e-09,3;UBERON:0004782,1.30e-09,3;UBERON:0003281,1.30e-09,3;UBERON:0009664,1.30e-09,3;UBERON:0002296,1.30e-09,3;UBERON:0005602,1.30e-09,3;UBERON:0001179,1.30e-09,3;UBERON:0006293,1.30e-09,3;UBERON:0000014,1.40e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,1.89453753271713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04171104434093,0,0,0,0.254253650292766,0,0,0,0.868124974666461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588187602953219,0.335643173951685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0.959293472527256,2.18586072873289,0,0,2.72539988855215,0,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624902039810533,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0.80057074828547,0,0,0,0,0.159633859057151,0,0,0,0,0,0.392590874004102,0,0,0,0,0,0,0,1.0085253435176,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29556554731173,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0.467878926924211,0,0,0,0.329821550236287,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,1.49911733887393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.151557396436479,0.803892390468535,0,0,0,0,0,0,0.560659312903067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:26116596..26116611,+ | |||
}} |
Revision as of 10:39, 21 January 2014
Short description: | p@chr20:26116596..26116611, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr20:26116596..26116611, + |
Coexpression cluster: | C2254_splenic_adult_fibrosarcoma_signet_renal_testis_fibrous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 6.43e-14 | 2 |
bone matrix secreting cell | 7.30e-14 | 2 |
osteocyte | 7.30e-14 | 2 |
osteoclast | 7.30e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 1.01e-09 | 3 |
gall bladder primordium | 1.01e-09 | 3 |
spleen | 1.30e-09 | 3 |
gastrointestinal system mesentery | 1.30e-09 | 3 |
stomach region | 1.30e-09 | 3 |
mesentery | 1.30e-09 | 3 |
gastrointestinal system serosa | 1.30e-09 | 3 |
mesentery of stomach | 1.30e-09 | 3 |
gut mesentery | 1.30e-09 | 3 |
dorsal mesentery | 1.30e-09 | 3 |
dorsal mesogastrium | 1.30e-09 | 3 |
peritoneal cavity | 1.30e-09 | 3 |
spleen primordium | 1.30e-09 | 3 |
zone of skin | 1.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 2.78e-26 | 1 |
skin benign neoplasm | 2.78e-26 | 1 |
integumentary system benign neoplasm | 2.78e-26 | 1 |
dermis tumor | 2.78e-26 | 1 |
cutaneous fibrous histiocytoma | 2.78e-26 | 1 |
giant cell tumor | 7.30e-14 | 2 |
bone giant cell tumor | 7.30e-14 | 2 |
lymphoma | 5.98e-11 | 10 |
benign neoplasm | 1.40e-07 | 4 |
thoracic cancer | 1.92e-07 | 4 |
breast cancer | 1.92e-07 | 4 |