FFCP PHASE1:Hg19::chr20:22566120..22566136,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3170 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5022 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y261 | |||
|association_with_transcript=-19bp_to_NM_153675,uc002wsn.2_5end | |||
|coexpression_cluster_id=C703 | |||
|description=CAGE_peak_4_at_FOXA2_5end | |||
|id=chr20:22566120..22566136,- | |||
|ontology_enrichment_celltype=CL:0000223!3.75e-24!59;CL:0002076!2.71e-15!43;CL:0000066!5.50e-15!254;CL:0002368!5.84e-15!13;CL:0000181!2.16e-14!12;CL:0000417!2.16e-14!12;CL:0000668!2.16e-14!12;CL:0000414!2.16e-14!12;CL:0000412!2.16e-14!12;CL:0000182!2.16e-14!12;CL:0000082!1.50e-07!19;CL:0002202!2.82e-07!9;CL:0002632!2.82e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.72e-22;12!CL:0002368;5.57e-14;13!CL:0000307;1.11e-10;3!CL:0002076;5.35e-08;42!CL:0002202;7.02e-08;9!CL:0002632;7.02e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.57e-22,58;CL:0000182,1.69e-22,12;CL:0002368,5.06e-14,13;CL:0000068,1.08e-10,3;CL:0000069,1.08e-10,3;CL:0000307,1.08e-10,3;CL:0000377,1.08e-10,3;CL:0002076,4.48e-10,42;CL:0002202,7.02e-08,9;CL:0002632,7.02e-08,9;CL:0000066,4.60e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0009497;3.66e-36;13!UBERON:0004161;7.51e-33;11!UBERON:0001041;2.31e-23;30!CL:0000223;2.18e-15;58!UBERON:0003104;5.75e-11;31!CL:0000377;1.11e-10;3!UBERON:0006242;1.65e-08;1 | |||
|ontology_enrichment_disease=DOID:305!7.70e-12!106;DOID:3119!1.33e-08!14;DOID:0050687!1.68e-08!143;DOID:0050615!4.92e-07!16 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.41e-25!169;UBERON:0000925!5.41e-25!169;UBERON:0006595!5.41e-25!169;UBERON:0004921!9.26e-24!129;UBERON:0004185!9.26e-24!129;UBERON:0005911!2.22e-23!82;UBERON:0001007!8.21e-23!155;UBERON:0001555!8.21e-23!155;UBERON:0007026!8.21e-23!155;UBERON:0000077!2.57e-22!130;UBERON:0009497!1.02e-21!25;UBERON:0000015!1.02e-21!25;UBERON:0002423!1.02e-21!25;UBERON:0006235!1.02e-21!25;UBERON:0004161!1.02e-21!25;UBERON:0001041!4.75e-21!98;UBERON:0008835!6.05e-19!22;UBERON:0003894!6.05e-19!22;UBERON:0007499!9.01e-19!25;UBERON:0009854!5.69e-18!23;UBERON:0009856!6.62e-18!26;UBERON:0000466!9.34e-17!126;UBERON:0005178!7.30e-16!34;UBERON:0002224!7.30e-16!34;UBERON:0005181!2.72e-15!35;UBERON:0005177!1.23e-14!107;UBERON:0000065!2.14e-14!53;UBERON:0003929!1.28e-13!54;UBERON:0002107!1.85e-13!19;UBERON:0006925!1.85e-13!19;UBERON:0008836!1.85e-13!19;UBERON:0009569!2.04e-12!113;UBERON:0002048!2.85e-12!22;UBERON:0000117!2.85e-12!22;UBERON:0000171!2.85e-12!22;UBERON:0000170!2.85e-12!22;UBERON:0005597!2.85e-12!22;UBERON:0000118!2.85e-12!22;UBERON:0005153!3.31e-12!37;UBERON:0008947!6.31e-12!38;UBERON:0003258!6.31e-12!38;UBERON:0001004!1.43e-11!72;UBERON:0002365!1.99e-10!31;UBERON:0002330!1.99e-10!31;UBERON:0001048!2.03e-09!168;UBERON:0005057!3.27e-09!26;UBERON:0002294!4.08e-09!7;UBERON:0001173!4.08e-09!7;UBERON:0004912!4.08e-09!7;UBERON:0005157!4.30e-09!51;UBERON:0000915!5.32e-09!52;UBERON:0003104!6.21e-09!238;UBERON:0009142!6.21e-09!238;UBERON:0007196!3.77e-08!14;UBERON:0001558!3.77e-08!14;UBERON:0004802!1.50e-07!19;UBERON:0000115!1.50e-07!19;UBERON:0000344!6.49e-07!12;UBERON:0002100!9.12e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.01e-28;25!UBERON:0002107;1.15e-24;19!UBERON:0006925;1.15e-24;19!UBERON:0002365;3.60e-14;31!UBERON:0002330;3.60e-14;31!UBERON:0002368;3.02e-12;33!UBERON:0000949;8.25e-09;43!UBERON:0002417;1.29e-08;58!UBERON:0000916;1.29e-08;58!UBERON:0002171;1.65e-08;1!UBERON:0006518;1.65e-08;1!UBERON:0008949;1.65e-08;1!UBERON:0000101;1.65e-08;1!UBERON:0002167;1.65e-08;1!UBERON:0009569;8.97e-08;110!UBERON:0005172;1.15e-07;52!UBERON:0005173;1.15e-07;52!UBERON:0000065;1.28e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,9.66e-29,25;UBERON:0000015,9.66e-29,25;UBERON:0002423,9.66e-29,25;UBERON:0006235,9.66e-29,25;UBERON:0004161,9.66e-29,25;UBERON:0008835,8.36e-27,22;UBERON:0003894,8.36e-27,22;UBERON:0009854,1.40e-25,23;UBERON:0002107,1.14e-24,19;UBERON:0006925,1.14e-24,19;UBERON:0008836,1.14e-24,19;UBERON:0007499,2.00e-23,25;UBERON:0009856,1.80e-22,26;UBERON:0005911,3.21e-20,82;UBERON:0001041,5.55e-19,87;UBERON:0003929,6.73e-18,54;UBERON:0004921,6.85e-17,118;UBERON:0004119,1.52e-16,160;UBERON:0000925,1.52e-16,160;UBERON:0006595,1.52e-16,160;UBERON:0005177,8.52e-16,101;UBERON:0001007,7.80e-15,145;UBERON:0001555,7.80e-15,145;UBERON:0007026,7.80e-15,145;UBERON:0002365,1.07e-14,31;UBERON:0002330,1.07e-14,31;UBERON:0009569,6.00e-14,112;UBERON:0002368,6.84e-13,35;UBERON:0005172,2.55e-12,54;UBERON:0005173,2.55e-12,54;UBERON:0002417,6.37e-11,60;UBERON:0000916,6.37e-11,60;UBERON:0001048,3.01e-10,160;UBERON:0000949,8.90e-10,45;UBERON:0002530,5.01e-09,59;UBERON:0002100,1.06e-08,199;UBERON:0002171,1.78e-08,1;UBERON:0006518,1.78e-08,1;UBERON:0008949,1.78e-08,1;UBERON:0000101,1.78e-08,1;UBERON:0002167,1.78e-08,1;UBERON:0000065,1.44e-07,54;UBERON:0011216,3.07e-07,223;UBERON:0005178,3.23e-07,34;UBERON:0002224,3.23e-07,34;UBERON:0005181,5.36e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60530208930985,0.982827216677626,7.68026878685825,0,1.8448265781467,0,0,1.1240175325762,0,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20859449591622,0,0.460404944679482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.18246069886334,0.27470839445503,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,1.98341898433174,0.192190067365106,0.127612712494584,4.4509423576442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63577591633371,0,2.17781969722645,4.61304623806218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844501632511974,0,0,0.251932747854276,0,0,0,0.179736702294654,7.69791051105119,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529536760149002,0,0,0,0,0,0.240476460754601,1.28071796843612,0,2.59362750877391,0,15.4435498075768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,6.22387140227067,6.01635766182515,8.42544298177311,0.885847333632739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,10.2586563574658,3.97520666736664,0,0,0.855434189421647,0,1.17466153824464,0.78602152549833,1.24271716604159,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0.979156554036111,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,2.03067886542995,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490751168076215,0.487671699929078,0,0,0,0,0.467878926924211,0.795803100645473,0,0.79062257427272,0,2.2644426535001,0.0771741581079447,0,0.940634592723046,0,0,0,0,0,0,0,0,0,0,0,0.320965466756673,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@FOXA2 | |||
}} |
Revision as of 10:31, 21 January 2014
Short description: | p4@FOXA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FOXA2_5end |
Coexpression cluster: | C703_liver_hepatocellular_Hepatocyte_hepatoblastoma_colon_gastrointestinal_mature |
Association with transcript: | -19bp_to_NM_153675, uc002wsn.2_5end |
EntrezGene: | FOXA2 |
HGNC: | 5022 |
UniProt: | Q9Y261 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.57e-22 | 58 |
hepatocyte | 1.69e-22 | 12 |
respiratory epithelial cell | 5.06e-14 | 13 |
duct epithelial cell | 1.08e-10 | 3 |
branched duct epithelial cell | 1.08e-10 | 3 |
tracheal epithelial cell | 1.08e-10 | 3 |
tracheoblast | 1.08e-10 | 3 |
endo-epithelial cell | 4.48e-10 | 42 |
epithelial cell of tracheobronchial tree | 7.02e-08 | 9 |
epithelial cell of lower respiratory tract | 7.02e-08 | 9 |
epithelial cell | 4.60e-07 | 253 |