FFCP PHASE1:Hg19::chr20:22564895..22564910,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3170 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5022 | |||
|TSSclassifier=strong | |||
|UniProt=E7EPG7 | |||
|association_with_transcript=0bp_to_ENST00000444877_5end | |||
|description=CAGE_peak_1_at_FOXA2_5end | |||
|id=chr20:22564895..22564910,- | |||
|ontology_enrichment_celltype=CL:0000223!1.93e-17!59;CL:0000066!4.18e-15!254;CL:0002076!1.18e-11!43;CL:0002368!3.64e-11!13;CL:0000181!5.88e-09!12;CL:0000417!5.88e-09!12;CL:0000668!5.88e-09!12;CL:0000414!5.88e-09!12;CL:0000412!5.88e-09!12;CL:0000182!5.88e-09!12;CL:0002202!7.29e-07!9;CL:0002632!7.29e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.02e-16;13!CL:0002076;2.50e-13;42!CL:0000182;3.69e-11;12!CL:0002202;3.96e-10;9!CL:0002632;3.96e-10;9!CL:0000307;8.58e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,2.52e-22,58;CL:0000066,9.39e-17,253;CL:0002368,1.24e-16,13;CL:0002076,1.25e-15,42;CL:0000182,3.65e-11,12;CL:0002202,4.63e-10,9;CL:0002632,4.63e-10,9;CL:0000068,8.08e-07,3;CL:0000069,8.08e-07,3;CL:0000307,8.08e-07,3;CL:0000377,8.08e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.39e-16;30!UBERON:0009497;2.78e-15;13!CL:0000223;8.65e-15;58!UBERON:0004161;3.50e-12;11!UBERON:0003104;1.84e-08;31!CL:0000377;8.58e-07;3 | |||
|ontology_enrichment_disease=DOID:305!1.51e-12!106;DOID:0050687!1.04e-10!143;DOID:162!2.63e-07!235;DOID:14566!3.33e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3119;5.83e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.84e-09,106;DOID:0050687,1.03e-07,143;DOID:3119,5.90e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.47e-25!169;UBERON:0000925!6.47e-25!169;UBERON:0006595!6.47e-25!169;UBERON:0001007!7.50e-25!155;UBERON:0001555!7.50e-25!155;UBERON:0007026!7.50e-25!155;UBERON:0004921!7.38e-22!129;UBERON:0004185!7.38e-22!129;UBERON:0005911!9.14e-22!82;UBERON:0000077!1.80e-18!130;UBERON:0003929!8.92e-17!54;UBERON:0000466!1.32e-16!126;UBERON:0005177!8.02e-16!107;UBERON:0001041!9.57e-14!98;UBERON:0009497!2.50e-12!25;UBERON:0000015!2.50e-12!25;UBERON:0002423!2.50e-12!25;UBERON:0006235!2.50e-12!25;UBERON:0004161!2.50e-12!25;UBERON:0009856!9.31e-12!26;UBERON:0005153!3.93e-11!37;UBERON:0007499!5.25e-11!25;UBERON:0009854!1.08e-10!23;UBERON:0001048!1.46e-10!168;UBERON:0009569!5.67e-10!113;UBERON:0008835!6.10e-10!22;UBERON:0003894!6.10e-10!22;UBERON:0000464!1.36e-09!104;UBERON:0005178!2.51e-09!34;UBERON:0002224!2.51e-09!34;UBERON:0005157!5.47e-09!51;UBERON:0005181!6.65e-09!35;UBERON:0002107!8.81e-09!19;UBERON:0006925!8.81e-09!19;UBERON:0008836!8.81e-09!19;UBERON:0003104!1.54e-08!238;UBERON:0009142!1.54e-08!238;UBERON:0005409!4.91e-08!35;UBERON:0000065!5.92e-08!53;UBERON:0002100!6.86e-08!216;UBERON:0002048!1.10e-07!22;UBERON:0000117!1.10e-07!22;UBERON:0000171!1.10e-07!22;UBERON:0000170!1.10e-07!22;UBERON:0005597!1.10e-07!22;UBERON:0000118!1.10e-07!22;UBERON:0002530!1.38e-07!59;UBERON:0005172!2.27e-07!55;UBERON:0005173!2.27e-07!55;UBERON:0000949!3.15e-07!45;UBERON:0008947!8.35e-07!38;UBERON:0003258!8.35e-07!38;UBERON:0002365!8.93e-07!31;UBERON:0002330!8.93e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;9.48e-14;25!UBERON:0002107;6.98e-12;19!UBERON:0006925;6.98e-12;19!UBERON:0005409;4.91e-10;22!UBERON:0002048;3.31e-09;22!UBERON:0000117;3.31e-09;22!UBERON:0000171;3.31e-09;22!UBERON:0000170;3.31e-09;22!UBERON:0005178;7.41e-09;34!UBERON:0002224;7.41e-09;34!UBERON:0002365;1.26e-08;31!UBERON:0002330;1.26e-08;31!UBERON:0005181;1.36e-08;35!UBERON:0000065;4.17e-08;44!UBERON:0000160;2.91e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.64e-22,118;UBERON:0004119,3.37e-20,160;UBERON:0000925,3.37e-20,160;UBERON:0006595,3.37e-20,160;UBERON:0001007,4.39e-19,145;UBERON:0001555,4.39e-19,145;UBERON:0007026,4.39e-19,145;UBERON:0005911,2.90e-17,82;UBERON:0001041,7.85e-17,87;UBERON:0007499,1.34e-15,25;UBERON:0009856,7.71e-15,26;UBERON:0005177,2.47e-14,101;UBERON:0008835,8.21e-14,22;UBERON:0003894,8.21e-14,22;UBERON:0009497,9.12e-14,25;UBERON:0000015,9.12e-14,25;UBERON:0002423,9.12e-14,25;UBERON:0006235,9.12e-14,25;UBERON:0004161,9.12e-14,25;UBERON:0009854,4.64e-13,23;UBERON:0002107,6.92e-12,19;UBERON:0006925,6.92e-12,19;UBERON:0008836,6.92e-12,19;UBERON:0003929,1.13e-11,54;UBERON:0009569,5.59e-11,112;UBERON:0005157,1.44e-10,47;UBERON:0005153,2.92e-10,37;UBERON:0005178,5.94e-10,34;UBERON:0002224,5.94e-10,34;UBERON:0000065,1.06e-09,54;UBERON:0005181,1.46e-09,35;UBERON:0002048,3.89e-09,22;UBERON:0000117,3.89e-09,22;UBERON:0000171,3.89e-09,22;UBERON:0000170,3.89e-09,22;UBERON:0005597,3.89e-09,22;UBERON:0000118,3.89e-09,22;UBERON:0002365,8.13e-09,31;UBERON:0002330,8.13e-09,31;UBERON:0005409,1.68e-08,25;UBERON:0011216,1.92e-07,223;UBERON:0001004,2.20e-07,74;UBERON:0008947,2.43e-07,38;UBERON:0003258,2.43e-07,38;UBERON:0000160,3.42e-07,17;UBERON:0005172,4.65e-07,54;UBERON:0005173,4.65e-07,54 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,5.89761447603621,46.0548770861802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0120591877825,11.8321283253372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68507104770311,3.64295288292542,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,1.63647672354501,0,0.243947412259191,0.662648841607426,3.36962434321603,1.7622379352613,5.80337957013945,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,22.8159062679296,14.7424082501644,6.49868897349544,0,13.5287282397425,0,0.548751427043128,19.1082980537953,0,3.05541869023148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.425325291727159,2.86587272649115,4.06887513919547,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,20.1835280818009,0,2.4861867012692,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66215201785745,0,0,0,0,0,0,11.5405933045449,1.64825036673018,1.73269949833235,0.574265537996172,0,0,0,0,0,0,0,0,0,0,10.4129496677416,5.57351195358808,1.40373983744043,22.5581851307876,0,0,0,0.924100740528266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0.136499911407986,0.141405431953713,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0.709522128141196,0,0,0,0,6.83177000351136,4.69211592875051,6.53345909167936,11.2972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0.383010740264733,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,10.1055891820439,0,0,0,0,0,0.296964680832639,0,0,0,0.333926115068718,0,43.4918340743667,0,0.828851746593443,58.9522629979006,0,0.123084805461069,0,11.5031489468578,1.61119057208048,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.341380344856499,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,23.7473160009021,0,2.98578579323551,1.14994833854341,4.27721101453538,0,0,0,0,0,0,0,0,0,0,14.5188859258397,0,0,0.300646838828985,1.34794648816421,1.32930774541437,0.330991955875499,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,30.8013882153336,0,0,0,0,0.195551382734803,0.961905843018405,10.4591967422283,0,29.3944450994376,0,66.9220491661662,0,0,0,0,0.209205692624666,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.6393519243926,40.2582061589913,33.8729177946594,44.6211460314704,27.7565497871592,0,0,0,0.482259445395058,0,0,0,0,0,0,0,0.104909176269996,0,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,3.11951578847488,0,0,23.7414618558494,3.97520666736664,0,0,13.3447733549777,0,18.7945846119143,7.8602152549833,8.28478110694391,0,0,0,0,0,0,0,0,14.4489768550216,0,0,0,0,0,0.18628920882415,0,15.1226293634149,0,0,10.3516960667196,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0.310525913752519,0,0,0,0,0,0,0.181848659202559,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.61234733458304,0,0,0,0,0,0,0.655219697692825,0,15.6370971285384,0,0,0,0,1.65695355226657,3.21722867754722,9.33115890049459,0,0,0,0.109209638192014,0,0,0,0,0,0,14.4102734691385,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0,1.03973099535304,0,2.0710797781803,2.3869946653953,0.902523940191087,1.61364054962816,39.0757005616546,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,8.34235514190519,0.235479278551542,0,2.24217730651031,0,4.10262423315381,0.9555033757741,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,1.78968690876468,8.73537079175662,3.90137359943262,0,0,0,0,47.9575900097317,13.528652710973,0,33.0932020374153,0,2.41540549706678,1.15761237161917,1.09279780251979,61.141248526998,0,23.5676547101626,0,0,0,0,0,0.128915775947154,0,0,1.05868461514708,0.802413666891683,10.9550458236978,0,0,0.157771562193185,0,0,12.1676173318542,0,0,0,0,0,1.39368351112581,0,0,0.275684698604535,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0.25458863311266,0.404234377916439,0,0,0,0.286888821570705,0.332660356546013,0.488419611665847,0,0,0.0898252021065869,0,1.58913877437726,0.406896178315738,0,0,0 | |||
|short_description=p1@FOXA2 | |||
}} |
Revision as of 10:31, 21 January 2014
Short description: | p1@FOXA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FOXA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000444877_5end |
EntrezGene: | FOXA2 |
HGNC: | 5022 |
UniProt: | E7EPG7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 2.52e-22 | 58 |
epithelial cell | 9.39e-17 | 253 |
respiratory epithelial cell | 1.24e-16 | 13 |
endo-epithelial cell | 1.25e-15 | 42 |
hepatocyte | 3.65e-11 | 12 |
epithelial cell of tracheobronchial tree | 4.63e-10 | 9 |
epithelial cell of lower respiratory tract | 4.63e-10 | 9 |
duct epithelial cell | 8.08e-07 | 3 |
branched duct epithelial cell | 8.08e-07 | 3 |
tracheal epithelial cell | 8.08e-07 | 3 |
tracheoblast | 8.08e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.84e-09 | 106 |
cell type cancer | 1.03e-07 | 143 |
gastrointestinal system cancer | 5.90e-07 | 14 |