FFCP PHASE1:Hg19::chr1:78769549..78769554,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=5737 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9600 | |||
|TSSclassifier=not | |||
|UniProt=P43088 | |||
|association_with_transcript=-13bp_to_ENST00000370758_5end | |||
|description=CAGE_peak_5_at_PTGFR_5end | |||
|id=chr1:78769549..78769554,+ | |||
|ontology_enrichment_celltype=CL:0000594!4.50e-10!3;CL:0002602!5.68e-08!2;CL:0000569!5.28e-07!4;CL:0000011!5.28e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002602;1.55e-98;2!CL:0002540;1.38e-09;6!CL:0000062;8.14e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002602,5.68e-99,2;CL:0002540,1.44e-09,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009568!5.68e-08!2;UBERON:0002216!5.68e-08!2;UBERON:0002209!5.68e-08!2;UBERON:0002213!5.68e-08!2;UBERON:0004267!5.68e-08!2;UBERON:0006444!5.68e-08!2;UBERON:0001995!5.68e-08!2;UBERON:0004715!5.68e-08!2;UBERON:0001468!5.68e-08!2;UBERON:0001130!5.68e-08!2;UBERON:0001066!5.68e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0006444;1.55e-98;2!UBERON:0001995;1.55e-98;2!UBERON:0004715;1.55e-98;2!UBERON:0002418;3.35e-66;3!UBERON:0004755;3.35e-66;3!UBERON:0011135;2.71e-40;5!UBERON:0002216;2.71e-40;5!UBERON:0011134;2.71e-40;5!UBERON:0002209;2.71e-40;5!UBERON:0002213;2.71e-40;5!UBERON:0007844;2.71e-40;5!UBERON:0011138;2.71e-40;5!UBERON:0001130;2.71e-40;5!UBERON:0001066;2.71e-40;5!UBERON:0001468;2.71e-40;5!UBERON:0004905;1.11e-25;8!UBERON:0000982;1.11e-25;8!UBERON:0004770;1.11e-25;8!UBERON:0004765;5.34e-18;26!UBERON:0000075;1.95e-13;16!UBERON:0001434;6.89e-11;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006444,5.68e-99,2;UBERON:0001995,5.68e-99,2;UBERON:0004715,5.68e-99,2;UBERON:0002418,1.71e-66,3;UBERON:0004755,1.71e-66,3;UBERON:0011135,1.81e-40,5;UBERON:0002216,1.81e-40,5;UBERON:0011134,1.81e-40,5;UBERON:0002209,1.81e-40,5;UBERON:0002213,1.81e-40,5;UBERON:0005856,1.81e-40,5;UBERON:0005866,1.81e-40,5;UBERON:0005863,1.81e-40,5;UBERON:0007844,1.81e-40,5;UBERON:0011138,1.81e-40,5;UBERON:0001130,1.81e-40,5;UBERON:0001066,1.81e-40,5;UBERON:0001468,1.81e-40,5;UBERON:0004905,8.65e-26,8;UBERON:0000982,8.65e-26,8;UBERON:0004770,8.65e-26,8;UBERON:0000075,1.72e-13,16 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,1.36142988256051,1.98838425436749,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0.207970861530807,0,0,0.35142424497814,0,0,1.03473071292505,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328508624055237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.308097234229289,0,0,0.537101224341368,0.725083469571143,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0.39961921916426,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472834243795189,0,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,1.25783950876288,0,0,0.151230923763239,0.15543720058278,0.147855149989634,0.159296767163702,0,0,0.414706207840855,0,0,0.300515217994437,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333694205676207,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@PTGFR | |||
}} |
Revision as of 19:13, 10 January 2014
Short description: | p5@PTGFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_PTGFR_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000370758_5end |
EntrezGene: | PTGFR |
HGNC: | 9600 |
UniProt: | P43088 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
annulus pulposus cell | 5.68e-99 | 2 |
mesenchymal stem cell of the bone marrow | 1.44e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
annulus fibrosus | 5.68e-99 | 2 |
fibrocartilage | 5.68e-99 | 2 |
annulus fibrosus disci intervertebralis | 5.68e-99 | 2 |
cartilage tissue | 1.71e-66 | 3 |
skeletal tissue | 1.71e-66 | 3 |
intervertebral cartilage | 1.81e-40 | 5 |
symphysis | 1.81e-40 | 5 |
nonsynovial joint | 1.81e-40 | 5 |
fibrous joint | 1.81e-40 | 5 |
cartilaginous joint | 1.81e-40 | 5 |
developing mesenchymal condensation | 1.81e-40 | 5 |
pre-cartilage condensation | 1.81e-40 | 5 |
cartilaginous condensation | 1.81e-40 | 5 |
cartilage element | 1.81e-40 | 5 |
post-cranial axial skeletal system | 1.81e-40 | 5 |
vertebral column | 1.81e-40 | 5 |
intervertebral disk | 1.81e-40 | 5 |
intervertebral joint | 1.81e-40 | 5 |
articulation | 8.65e-26 | 8 |
skeletal joint | 8.65e-26 | 8 |
articular system | 8.65e-26 | 8 |
subdivision of skeletal system | 1.72e-13 | 16 |