FFCP PHASE1:Hg19::chr1:27669735..27669761,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84958 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15584 | |||
|TSSclassifier=strong | |||
|UniProt=Q5SSC6 | |||
|association_with_transcript=16bp_to_ENST00000473280_5end | |||
|description=CAGE_peak_2_at_SYTL1_5end | |||
|id=chr1:27669735..27669761,+ | |||
|ontology_enrichment_celltype=CL:0002076!5.26e-23!43;CL:0000223!3.07e-21!59;CL:0000066!4.02e-19!254;CL:0002251!1.46e-13!21;CL:0002159!3.17e-10!13;CL:0002368!7.75e-10!13;CL:0002623!8.96e-07!3;CL:0000622!9.87e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000622;7.67e-19;5!CL:0002623;2.96e-18;3!CL:0002076;9.47e-16;42!CL:0000154;9.85e-16;6!CL:0002159;2.51e-14;14!CL:0000349;3.52e-14;19!CL:0002251;2.37e-13;20!CL:0000575;4.15e-13;2!CL:0000150;1.55e-10;9!CL:0002577;3.53e-09;3!CL:0000240;5.04e-09;6!CL:0000311;5.04e-09;6!CL:0000079;5.04e-09;6!CL:0000237;5.04e-09;6!CL:0002541;1.81e-08;3!CL:0000313;1.45e-07;1!CL:0002368;2.92e-07;13!CL:0002336;5.77e-07;1!CL:0002261;5.77e-07;1!CL:0002170;5.77e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.91e-20,42;CL:0000622,4.03e-19,5;CL:0002623,2.50e-18,3;CL:0000223,1.80e-16,58;CL:0000154,5.79e-16,6;CL:0000349,2.79e-14,19;CL:0002159,2.84e-14,14;CL:0002251,3.02e-13,20;CL:0000575,4.70e-13,2;CL:0000066,3.20e-11,253;CL:0000150,1.10e-10,9;CL:0002577,3.54e-09,3;CL:0000240,9.80e-09,6;CL:0000311,9.80e-09,6;CL:0000079,9.80e-09,6;CL:0000237,9.80e-09,6;CL:0000036,9.80e-09,6;CL:0000357,9.80e-09,6;CL:0000114,9.80e-09,6;CL:0002541,2.36e-08,3;CL:0000313,1.46e-07,1;CL:0002368,2.43e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000223;4.62e-09;58!CL:0000357;5.04e-09;6!CL:0000114;5.04e-09;6!UBERON:0009143;5.77e-07;1!UBERON:0008801;5.77e-07;1 | |||
|ontology_enrichment_disease=DOID:1749!1.47e-15!14;DOID:305!2.60e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:2152;1.45e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.46e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.20e-19!169;UBERON:0000925!3.20e-19!169;UBERON:0006595!3.20e-19!169;UBERON:0001004!1.73e-16!72;UBERON:0000166!4.75e-16!21;UBERON:0005631!4.77e-16!14;UBERON:0000158!4.77e-16!14;UBERON:0000161!8.95e-15!35;UBERON:0000165!1.12e-12!28;UBERON:0000930!1.12e-12!28;UBERON:0003408!1.36e-12!10;UBERON:0001007!4.50e-12!155;UBERON:0001555!4.50e-12!155;UBERON:0007026!4.50e-12!155;UBERON:0000077!5.46e-12!130;UBERON:0003124!7.66e-12!7;UBERON:0001044!2.47e-11!6;UBERON:0003293!2.47e-11!6;UBERON:0003294!2.47e-11!6;UBERON:0010047!2.47e-11!6;UBERON:0000167!2.47e-11!6;UBERON:0001041!1.25e-10!98;UBERON:0004921!1.52e-09!129;UBERON:0004185!1.52e-09!129;UBERON:0002530!2.98e-09!59;UBERON:0000065!4.40e-09!53;UBERON:0000078!3.64e-08!18;UBERON:0000478!5.03e-08!24;UBERON:0006562!8.92e-08!11;UBERON:0001444!1.24e-07!48;UBERON:0001987!1.91e-07!4;UBERON:0004340!1.91e-07!4;UBERON:0005911!3.38e-07!82;UBERON:0000974!5.65e-07!10;UBERON:0003102!7.77e-07!95;UBERON:0001042!9.97e-07!10;UBERON:0009145!9.97e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;9.85e-16;6!UBERON:0003293;9.85e-16;6!UBERON:0003294;9.85e-16;6!UBERON:0010047;9.85e-16;6!UBERON:0003408;9.85e-16;6!UBERON:0000167;9.85e-16;6!UBERON:0005631;4.07e-14;10!UBERON:0000158;4.07e-14;10!UBERON:0000161;4.22e-14;19!UBERON:0000166;4.22e-14;19!UBERON:0000165;5.10e-12;28!UBERON:0000478;4.84e-11;24!UBERON:0001041;3.79e-10;14!UBERON:0003124;1.81e-08;3!UBERON:0000920;1.81e-08;3!UBERON:0000305;5.97e-08;7!UBERON:0004911;1.45e-07;1!UBERON:0007811;1.99e-07;52!UBERON:0003729;3.05e-07;13!UBERON:0001987;4.43e-07;4!UBERON:0001831;5.77e-07;1!UBERON:0001567;5.77e-07;1!UBERON:0000964;5.78e-07;4!UBERON:0010409;5.78e-07;4!UBERON:0003343;8.81e-07;4!UBERON:0004785;8.81e-07;4!UBERON:0001004;9.66e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.08e-19,14;UBERON:0000158,1.08e-19,14;UBERON:0001044,1.11e-15,6;UBERON:0003293,1.11e-15,6;UBERON:0003294,1.11e-15,6;UBERON:0010047,1.11e-15,6;UBERON:0000167,1.11e-15,6;UBERON:0003124,1.36e-13,7;UBERON:0000166,5.42e-12,22;UBERON:0000165,1.92e-11,29;UBERON:0000930,1.92e-11,29;UBERON:0000478,4.05e-11,24;UBERON:0000033,2.36e-10,56;UBERON:0001444,5.53e-10,49;UBERON:0003102,7.64e-10,99;UBERON:0003408,1.84e-09,10;UBERON:0000153,3.72e-09,62;UBERON:0007811,3.72e-09,62;UBERON:0000161,4.80e-09,36;UBERON:0001004,6.52e-09,74;UBERON:0004923,1.61e-08,66;UBERON:0000920,2.36e-08,3;UBERON:0000305,3.83e-08,7;UBERON:0004911,1.46e-07,1;UBERON:0004871,3.54e-07,8;UBERON:0003729,3.95e-07,13;UBERON:0001987,4.44e-07,4;UBERON:0004340,4.44e-07,4;UBERON:0000964,6.14e-07,4;UBERON:0010409,6.14e-07,4;UBERON:0004348,6.14e-07,4;UBERON:0005427,6.14e-07,4;UBERON:0004121,6.34e-07,171;UBERON:0000924,6.34e-07,171;UBERON:0006601,6.34e-07,171;UBERON:0001831,8.18e-07,1;UBERON:0001567,8.18e-07,1;UBERON:0008801,8.18e-07,1;UBERON:0004119,8.85e-07,160;UBERON:0000925,8.85e-07,160;UBERON:0006595,8.85e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,1.58260186937072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,3.27865759463288,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,0.272746120590835,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768251997860379,1.1240175325762,1.00528972411631,1.01847289674383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,1.17587489739202,0.425325291727159,0.895585227028483,1.45316969256981,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,4.99306318531491,4.5358543999452,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20303882181971,0.644566922551274,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,1.95018073810956,0,0,0,0,0,0,0,0,0,0.661139661443912,1.72971060628596,4.72167036229961,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,0,1.08890984861323,0,0.86101074534246,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0.427296284509893,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851692475380653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,1.78178808499583,2.76444631889309,0,0,0.111308705022906,0,0.211125408127993,0.398495976502139,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0.254253650292766,0,0,0,0,0,0,0,0.110579259931225,0,0,0,1.11538995422883,0,0,0.23056390438806,0.0897576444097721,0,1.27600463892768,0.366390373607449,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36965233252463,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0.979923974143776,0.522355239482415,0.17472666824203,0,0,0,0,1.06687918137261,0.176512253383001,0.225980740780532,0,0,0,0,0,0,0.599428828746391,0.288180834308212,0,0,0,0.124252535565433,1.41416420770077,0,0,0,0,0.600420288709789,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.337017719270924,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,2.30298236783334,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,2.37462775128003,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.883445729729405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699397538597222,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63146558453795,0,1.10057159113007,0.808679663052368,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,1.09651553371436,0.496211178389294,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.333694205676207,0.156986185701028,0,0,0,0,0,0,0,0.581207126840626,0,0,2.07216164163037,2.3900586793153,1.38251932362818,0.860454717640555,0,0,0.423387050190929,1.14553434272025,0,0,5.92833788528299,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0.705789743431384,0,0.730336388246517,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.248298857183432,0,0.0636471582781649,0.202117188958219,0.870866991587845,0.342233301085281,0.5388164241167,0.143444410785353,0.332660356546013,0.162806537221949,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p2@SYTL1 | |||
}} |
Revision as of 17:19, 10 January 2014
Short description: | p2@SYTL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SYTL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENST00000473280_5end |
EntrezGene: | SYTL1 |
HGNC: | 15584 |
UniProt: | Q5SSC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.91e-20 | 42 |
acinar cell | 4.03e-19 | 5 |
acinar cell of salivary gland | 2.50e-18 | 3 |
endodermal cell | 1.80e-16 | 58 |
protein secreting cell | 5.79e-16 | 6 |
extraembryonic cell | 2.79e-14 | 19 |
general ecto-epithelial cell | 2.84e-14 | 14 |
epithelial cell of alimentary canal | 3.02e-13 | 20 |
corneal epithelial cell | 4.70e-13 | 2 |
epithelial cell | 3.20e-11 | 253 |
glandular epithelial cell | 1.10e-10 | 9 |
placental epithelial cell | 3.54e-09 | 3 |
stratified squamous epithelial cell | 9.80e-09 | 6 |
keratin accumulating cell | 9.80e-09 | 6 |
stratified epithelial cell | 9.80e-09 | 6 |
keratinizing barrier epithelial cell | 9.80e-09 | 6 |
epithelial fate stem cell | 9.80e-09 | 6 |
stratified epithelial stem cell | 9.80e-09 | 6 |
surface ectodermal cell | 9.80e-09 | 6 |
chorionic membrane mesenchymal stem cell | 2.36e-08 | 3 |
serous secreting cell | 1.46e-07 | 1 |
respiratory epithelial cell | 2.43e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.46e-07 | 1 |