FFCP PHASE1:Hg19::chr1:2360109..2360129,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C564 | |||
|description=CAGE_peak_at_chr1:2360109..2360129,+ | |||
|id=chr1:2360109..2360129,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.42e-26!43;CL:0000223!7.40e-19!59;CL:0002368!8.98e-18!13;CL:0002159!3.19e-17!13;CL:0002251!1.08e-13!21;CL:0000622!5.72e-13!5;CL:0000066!1.54e-12!254;CL:0000244!5.95e-11!4;CL:0000731!5.95e-11!4;CL:0000154!1.03e-10!6;CL:0002202!1.58e-09!9;CL:0002632!1.58e-09!9;CL:0002077!2.00e-09!33;CL:0002623!9.44e-09!3;CL:0002328!3.17e-08!3;CL:0000068!3.33e-08!3;CL:0000069!3.33e-08!3;CL:0000307!3.33e-08!3;CL:0000377!3.33e-08!3;CL:0002166!5.46e-08!3;CL:0002621!8.10e-08!3;CL:0000362!1.43e-07!8;CL:0000150!5.91e-07!9;CL:0000240!8.31e-07!6;CL:0000311!8.31e-07!6;CL:0000079!8.31e-07!6;CL:0000237!8.31e-07!6;CL:0000036!8.31e-07!6;CL:0000357!8.31e-07!6;CL:0000114!8.31e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.51e-25;42!CL:0002368;1.42e-22;13!CL:0002159;3.62e-20;14!CL:0000622;3.95e-16;5!CL:0002251;5.44e-16;20!CL:0000244;1.50e-13;4!CL:0000731;1.50e-13;4!CL:0000154;2.27e-13;6!CL:0002202;5.43e-12;9!CL:0002632;5.43e-12;9!CL:0002623;9.71e-11;3!CL:0002077;3.08e-10;34!CL:0000307;4.75e-10;3!CL:0002328;4.82e-10;3!CL:0002166;8.66e-10;3!CL:0002621;1.56e-09;3!CL:0000150;9.18e-09;9!CL:0000240;1.96e-08;6!CL:0000311;1.96e-08;6!CL:0000079;1.96e-08;6!CL:0000237;1.96e-08;6!CL:0000362;2.18e-08;9!CL:0002327;1.12e-07;4!CL:0000575;2.46e-07;2!CL:0000317;4.32e-07;2!CL:1000448;4.32e-07;2!CL:0002308;4.32e-07;2!CL:0002140;4.32e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.90e-33,42;CL:0000223,4.57e-24,58;CL:0002368,1.43e-22,13;CL:0002159,3.86e-20,14;CL:0000066,6.16e-19,253;CL:0000622,4.14e-16,5;CL:0002251,5.20e-16,20;CL:0000244,1.55e-13,4;CL:0000731,1.55e-13,4;CL:0000154,2.36e-13,6;CL:0002077,4.08e-12,34;CL:0002202,5.38e-12,9;CL:0002632,5.38e-12,9;CL:0002623,9.87e-11,3;CL:0002328,4.61e-10,3;CL:0000068,4.90e-10,3;CL:0000069,4.90e-10,3;CL:0000307,4.90e-10,3;CL:0000377,4.90e-10,3;CL:0002166,9.20e-10,3;CL:0002621,1.52e-09,3;CL:0000150,9.41e-09,9;CL:0000240,1.92e-08,6;CL:0000311,1.92e-08,6;CL:0000079,1.92e-08,6;CL:0000237,1.92e-08,6;CL:0000036,1.92e-08,6;CL:0000357,1.92e-08,6;CL:0000114,1.92e-08,6;CL:0002321,2.13e-08,250;CL:0000362,2.19e-08,9;CL:0002327,1.11e-07,4;CL:0000575,2.50e-07,2;CL:0000317,4.45e-07,2;CL:1000448,4.45e-07,2;CL:0002308,4.45e-07,2;CL:0002140,4.45e-07,2;CL:0000076,6.46e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000223;7.72e-13;58!CL:0000377;4.75e-10;3!CL:0000357;1.96e-08;6!CL:0000114;1.96e-08;6 | |||
|ontology_enrichment_disease=DOID:1749!9.04e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;9.45e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,8.41e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.15e-23!72;UBERON:0000166!5.81e-21!21;UBERON:0000161!1.08e-20!35;UBERON:0000165!5.29e-17!28;UBERON:0000930!5.29e-17!28;UBERON:0004119!3.27e-16!169;UBERON:0000925!3.27e-16!169;UBERON:0006595!3.27e-16!169;UBERON:0003102!1.53e-14!95;UBERON:0001044!4.79e-14!6;UBERON:0003293!4.79e-14!6;UBERON:0003294!4.79e-14!6;UBERON:0010047!4.79e-14!6;UBERON:0000167!4.79e-14!6;UBERON:0003408!2.05e-13!10;UBERON:0000065!3.56e-13!53;UBERON:0001444!6.02e-11!48;UBERON:0000078!1.10e-10!18;UBERON:0001007!1.77e-10!155;UBERON:0001555!1.77e-10!155;UBERON:0007026!1.77e-10!155;UBERON:0007196!9.83e-10!14;UBERON:0001558!9.83e-10!14;UBERON:0004921!6.16e-09!129;UBERON:0004185!6.16e-09!129;UBERON:0000365!1.00e-08!5;UBERON:0001041!1.81e-08!98;UBERON:0005178!2.34e-08!34;UBERON:0002224!2.34e-08!34;UBERON:0006562!2.39e-08!11;UBERON:0003126!3.04e-08!7;UBERON:0001005!3.04e-08!7;UBERON:0004815!3.17e-08!3;UBERON:0002031!3.17e-08!3;UBERON:0000077!3.50e-08!130;UBERON:0005181!4.93e-08!35;UBERON:0001949!8.10e-08!3;UBERON:0003729!2.96e-07!5;UBERON:0005910!3.07e-07!6;UBERON:0000072!3.14e-07!46;UBERON:0002530!4.24e-07!59;UBERON:0002365!4.25e-07!31;UBERON:0002330!4.25e-07!31;UBERON:0000974!6.00e-07!10;UBERON:0001042!7.50e-07!10;UBERON:0009145!7.50e-07!10;UBERON:0006947!7.78e-07!3;UBERON:0004054!7.78e-07!3;UBERON:0001723!7.95e-07!3;UBERON:0001033!7.95e-07!3;UBERON:0010056!7.95e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;4.04e-17;28!UBERON:0000161;1.51e-16;19!UBERON:0000166;1.51e-16;19!UBERON:0000486;2.31e-15;12!UBERON:0001044;8.59e-13;6!UBERON:0003293;8.59e-13;6!UBERON:0003294;8.59e-13;6!UBERON:0010047;8.59e-13;6!UBERON:0003408;8.59e-13;6!UBERON:0000167;8.59e-13;6!UBERON:0000365;7.92e-11;5!UBERON:0004815;4.82e-10;3!UBERON:0002031;4.82e-10;3!UBERON:0001041;8.46e-10;14!UBERON:0001949;1.56e-09;3!UBERON:0007196;4.40e-09;15!UBERON:0001558;4.40e-09;15!UBERON:0005910;5.22e-09;6!UBERON:0002365;8.28e-08;31!UBERON:0002330;8.28e-08;31!UBERON:0007811;8.77e-08;52!UBERON:0001911;1.12e-07;4!UBERON:0003729;1.88e-07;13!UBERON:0001708;1.98e-07;4!UBERON:0008895;1.98e-07;4!UBERON:0000033;3.22e-07;50!UBERON:0003126;4.28e-07;7!UBERON:0001005;4.28e-07;7!UBERON:0002419;4.32e-07;2!UBERON:0007771;4.32e-07;2!UBERON:0003297;4.32e-07;2!UBERON:0001821;4.32e-07;2!UBERON:0003487;4.32e-07;2!UBERON:0001820;4.32e-07;2!UBERON:0000153;5.01e-07;54!UBERON:0001004;7.36e-07;65!UBERON:0001444;7.78e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,1.90e-19,22;UBERON:0000161,5.78e-19,36;UBERON:0001004,5.28e-17,74;UBERON:0000165,1.97e-16,29;UBERON:0000930,1.97e-16,29;UBERON:0003102,5.82e-16,99;UBERON:0004119,9.45e-15,160;UBERON:0000925,9.45e-15,160;UBERON:0006595,9.45e-15,160;UBERON:0000033,3.66e-14,56;UBERON:0000153,8.23e-14,62;UBERON:0007811,8.23e-14,62;UBERON:0001044,8.39e-13,6;UBERON:0003293,8.39e-13,6;UBERON:0003294,8.39e-13,6;UBERON:0010047,8.39e-13,6;UBERON:0000167,8.39e-13,6;UBERON:0001444,1.94e-11,49;UBERON:0000365,8.12e-11,5;UBERON:0004815,4.61e-10,3;UBERON:0002031,4.61e-10,3;UBERON:0001949,1.52e-09,3;UBERON:0007196,4.32e-09,15;UBERON:0001558,4.32e-09,15;UBERON:0005910,5.33e-09,6;UBERON:0001007,1.70e-08,145;UBERON:0001555,1.70e-08,145;UBERON:0007026,1.70e-08,145;UBERON:0002365,5.89e-08,31;UBERON:0002330,5.89e-08,31;UBERON:0000065,1.10e-07,54;UBERON:0001911,1.11e-07,4;UBERON:0005333,1.11e-07,4;UBERON:0008425,1.11e-07,4;UBERON:0005311,1.11e-07,4;UBERON:0003408,1.62e-07,10;UBERON:0003729,1.75e-07,13;UBERON:0001708,2.07e-07,4;UBERON:0008895,2.07e-07,4;UBERON:0003126,4.28e-07,7;UBERON:0001005,4.28e-07,7;UBERON:0002419,4.45e-07,2;UBERON:0007771,4.45e-07,2;UBERON:0003297,4.45e-07,2;UBERON:0001821,4.45e-07,2;UBERON:0003487,4.45e-07,2;UBERON:0001820,4.45e-07,2;UBERON:0005089,4.45e-07,2;UBERON:0005088,4.45e-07,2;UBERON:0002530,9.96e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.27479102031034,22.2892379895905,18.8574545185062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.8577172975525,16.6852999252993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.752044242129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.76412986071539,8.45512973831587,14.9138389602282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.2915553692734,17.9842805212191,10.9576579928678,12.7772054318771,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74935335947108,26.3731941272209,12.7597587518148,13.9711295416443,17.4380363108377,23.0029607499127,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.8425435054759,16.7587399863331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,15.5051695258967,13.0012049207304,0,0,0,0,0,0,0,0,0,14.875642382488,28.8285101047659,75.9295639342776,22.0523962265099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95153871551882,0,0,13.4710957815717,20.7793705416094,17.4225575778116,0,23.2472901242464,32.0095803768489,33.7006916687873,18.1481486163498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.789147245095469,0,0,0,0,0,0,0,1.44999915086959,3.75518379342149,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,7.52888219104458,1.23120413606075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36965233252463,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,2.05784034570193,0,1.04836000945218,0,0,0,0,3.87956065953678,0,1.35588444468319,0,0,0,0,0,0,0,0,0,0,0,0,9.19206735005502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,7.7380195455795,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,2.55336503108073,0,0,0,0,0,0,0,0,0,0,0,0,3.12451019905266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.4640950189667,9.33115890049459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.39812451755641,0,1.65085738669511,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.992422356778588,0,2.04419884223352,0,0,0,0,0,0,0,0,0,0,0,1.02041020705668,0,0,0,0,0,0,0,0,0,0,26.1092366845426,48.1426105404939,30.41542511982,3.8720462293825,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0.109940516745429,0,0,0,0,0.490296643507811,0,0,0,0,0,0,0,0,1.60698544745092,3.88184358887261,0,0,1.37618785021362,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34557380091079,0,0.0645889098360061,0.558672428662721,0,0,0,2.8303177226605,1.02669990325584,2.08791364345221,2.36683277795832,0.665320713092027,0,0,0,0,0,0.122241444182866,0,1.33151354837103,0.402547587182052,0 | |||
|short_description=p@chr1:2360109..2360129,+ | |||
}} |
Revision as of 15:55, 10 January 2014
Short description: | p@chr1:2360109..2360129, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:2360109..2360129, + |
Coexpression cluster: | C564_Small_salivary_Corneal_Bronchial_Urothelial_Keratinocyte_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 8.41e-09 | 14 |