FFCP PHASE1:Hg19::chr1:207277701..207277733,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=722 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1325 | |||
|TSSclassifier=strong | |||
|UniProt=F2Z2V7 | |||
|association_with_transcript=0bp_to_ENST00000424088_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_C4BPA_5end | |||
|id=chr1:207277701..207277733,+ | |||
|ontology_enrichment_celltype=CL:0000181!8.71e-10!12;CL:0000417!8.71e-10!12;CL:0000668!8.71e-10!12;CL:0000414!8.71e-10!12;CL:0000412!8.71e-10!12;CL:0000182!8.71e-10!12;CL:0002150!5.62e-09!3;CL:0000861!5.62e-09!3;CL:0000860!1.77e-08!45;CL:0000223!2.14e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.31e-25;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.65e-25,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.67e-19;11!UBERON:0009497;4.86e-16;13!UBERON:0001041;5.15e-13;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!7.60e-13!129;UBERON:0004185!7.60e-13!129;UBERON:0009854!1.26e-12!23;UBERON:0009856!6.43e-11!26;UBERON:0008835!7.00e-11!22;UBERON:0003894!7.00e-11!22;UBERON:0001007!2.28e-10!155;UBERON:0001555!2.28e-10!155;UBERON:0007026!2.28e-10!155;UBERON:0002107!2.45e-10!19;UBERON:0006925!2.45e-10!19;UBERON:0008836!2.45e-10!19;UBERON:0004119!9.99e-10!169;UBERON:0000925!9.99e-10!169;UBERON:0006595!9.99e-10!169;UBERON:0007499!2.36e-09!25;UBERON:0009497!2.36e-09!25;UBERON:0000015!2.36e-09!25;UBERON:0002423!2.36e-09!25;UBERON:0006235!2.36e-09!25;UBERON:0004161!2.36e-09!25;UBERON:0005057!5.19e-09!26;UBERON:0000077!7.86e-09!130;UBERON:0002405!1.44e-08!115;UBERON:0002368!1.40e-07!35;UBERON:0007023!2.12e-07!115;UBERON:0003929!2.44e-07!54;UBERON:0005911!2.48e-07!82;UBERON:0001041!3.63e-07!98;UBERON:0001255!9.47e-07!2;UBERON:0001556!9.47e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.36e-27;19!UBERON:0006925;1.36e-27;19!UBERON:0002423;9.84e-21;25!UBERON:0002368;4.00e-17;33!UBERON:0002365;6.25e-16;31!UBERON:0002330;6.25e-16;31!UBERON:0000949;9.66e-13;43!UBERON:0002171;7.50e-10;1!UBERON:0006518;7.50e-10;1!UBERON:0008949;7.50e-10;1!UBERON:0000101;7.50e-10;1!UBERON:0002167;7.50e-10;1!UBERON:0006834;2.08e-09;1!UBERON:0005172;3.12e-09;52!UBERON:0005173;3.12e-09;52!UBERON:0002530;5.06e-09;57!UBERON:0002417;1.04e-07;58!UBERON:0000916;1.04e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.43e-27,19;UBERON:0006925,1.43e-27,19;UBERON:0008836,1.43e-27,19;UBERON:0008835,1.12e-23,22;UBERON:0003894,1.12e-23,22;UBERON:0009854,1.32e-22,23;UBERON:0007499,1.02e-20,25;UBERON:0009497,1.02e-20,25;UBERON:0000015,1.02e-20,25;UBERON:0002423,1.02e-20,25;UBERON:0006235,1.02e-20,25;UBERON:0004161,1.02e-20,25;UBERON:0009856,7.01e-20,26;UBERON:0002368,2.94e-18,35;UBERON:0002365,1.65e-16,31;UBERON:0002330,1.65e-16,31;UBERON:0005172,5.29e-14,54;UBERON:0005173,5.29e-14,54;UBERON:0000949,6.53e-14,45;UBERON:0002530,1.06e-12,59;UBERON:0002417,1.91e-12,60;UBERON:0000916,1.91e-12,60;UBERON:0003929,2.29e-11,54;UBERON:0005911,1.16e-10,82;UBERON:0005177,5.83e-10,101;UBERON:0001041,6.23e-10,87;UBERON:0002171,7.50e-10,1;UBERON:0006518,7.50e-10,1;UBERON:0008949,7.50e-10,1;UBERON:0000101,7.50e-10,1;UBERON:0002167,7.50e-10,1;UBERON:0006834,2.46e-09,1;UBERON:0009569,8.81e-09,112;UBERON:0004921,3.84e-08,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,1.41889337933151,0,0,0,0,0,0,0,0,0,0.989553900560148,0.797854630486527,2.98357325372886,0,0,0,0.251248665256743,1.0429658368404,0.65156653411535,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,5.23916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22462922052443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,893.622995493908,613.284183206839,667.592594549987,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45947924184864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,170.635915288628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,164.186788554703,0,0,0,0,0,0,0,0.714695326373367,0.822724546172388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,0.276283915531148,0,0,0,0,0,0.358042349351218,0,0.295930216910801,0,0,3.87733098438087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,0,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0,0,0,0.758238955541855,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,2.6786281984456,3.13180261848433,2.2243169471881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,624.752172169665,31.8016533389331,0,0,0,0,34.9194839096362,0.78602152549833,19.4692356013182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92997432237433,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.676892955143315,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,1.16024198352439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0.202056159043763,0.78894425931944,0,0.0814032686109745,0,0,0.269475606319761,0,1.1001729976458,0,0,0,0 | |||
|short_description=p2@C4BPA | |||
}} |
Revision as of 23:52, 10 January 2014
Short description: | p2@C4BPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C4BPA_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000424088_5end |
EntrezGene: | C4BPA |
HGNC: | 1325 |
UniProt: | F2Z2V7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.65e-25 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.43e-27 | 19 |
digestive gland | 1.43e-27 | 19 |
liver bud | 1.43e-27 | 19 |
hepatic diverticulum | 1.12e-23 | 22 |
liver primordium | 1.12e-23 | 22 |
digestive tract diverticulum | 1.32e-22 | 23 |
epithelial sac | 1.02e-20 | 25 |
epithelium of foregut-midgut junction | 1.02e-20 | 25 |
anatomical boundary | 1.02e-20 | 25 |
hepatobiliary system | 1.02e-20 | 25 |
foregut-midgut junction | 1.02e-20 | 25 |
septum transversum | 1.02e-20 | 25 |
sac | 7.01e-20 | 26 |
endocrine gland | 2.94e-18 | 35 |
exocrine gland | 1.65e-16 | 31 |
exocrine system | 1.65e-16 | 31 |
abdomen element | 5.29e-14 | 54 |
abdominal segment element | 5.29e-14 | 54 |
endocrine system | 6.53e-14 | 45 |
gland | 1.06e-12 | 59 |
abdominal segment of trunk | 1.91e-12 | 60 |
abdomen | 1.91e-12 | 60 |
gut epithelium | 2.29e-11 | 54 |
endo-epithelium | 1.16e-10 | 82 |
trunk region element | 5.83e-10 | 101 |
foregut | 6.23e-10 | 87 |
lower lobe of right lung | 7.50e-10 | 1 |
right lung lobe | 7.50e-10 | 1 |
lower lobe of lung | 7.50e-10 | 1 |
lobe of lung | 7.50e-10 | 1 |
right lung | 7.50e-10 | 1 |
uterus or analog | 2.46e-09 | 1 |
subdivision of trunk | 8.81e-09 | 112 |
subdivision of digestive tract | 3.84e-08 | 118 |