FFCP PHASE1:Hg19::chr1:205313604..205313620,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55220 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25573 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-294bp_to_ENST00000539253_5end | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_8_at_KLHDC8A_5end | |||
|id=chr1:205313604..205313620,- | |||
|ontology_enrichment_celltype=CL:0000764!6.63e-10!2;CL:0000765!6.63e-10!2;CL:0000050!6.63e-10!2;CL:0000038!6.63e-10!2;CL:0000558!6.63e-10!2;CL:0000547!6.63e-10!2;CL:0000549!6.63e-10!2;CL:0000550!6.63e-10!2;CL:0000552!6.63e-10!2;CL:0000242!5.70e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;8.82e-51;2!CL:0000558;8.82e-51;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,8.82e-51,2;CL:0000765,8.82e-51,2;CL:0000050,8.82e-51,2;CL:0000038,8.82e-51,2;CL:0000558,8.82e-51,2;CL:0000547,8.82e-51,2;CL:0000549,8.82e-51,2;CL:0000550,8.82e-51,2;CL:0000552,8.82e-51,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.50e-34;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003296!6.50e-17!4;UBERON:0010133!6.50e-17!4;UBERON:0007023!1.43e-15!115;UBERON:0001049!1.62e-13!57;UBERON:0005068!1.62e-13!57;UBERON:0006241!1.62e-13!57;UBERON:0007135!1.62e-13!57;UBERON:0000073!9.54e-13!94;UBERON:0001016!9.54e-13!94;UBERON:0005743!1.81e-11!86;UBERON:0002616!3.22e-11!59;UBERON:0003075!2.90e-10!86;UBERON:0007284!2.90e-10!86;UBERON:0001894!1.09e-09!7;UBERON:0006222!1.09e-09!7;UBERON:0002346!1.23e-09!90;UBERON:0001017!1.73e-09!82;UBERON:0000007!2.33e-09!2;UBERON:0001905!2.86e-09!2;UBERON:0002757!2.86e-09!2;UBERON:0010134!2.86e-09!2;UBERON:0002784!2.86e-09!2;UBERON:0005408!2.86e-09!2;UBERON:0001899!2.86e-09!2;UBERON:0003076!4.21e-09!15;UBERON:0003057!4.21e-09!15;UBERON:0000955!5.63e-09!69;UBERON:0006238!5.63e-09!69;UBERON:0004733!3.32e-08!12;UBERON:0002028!3.32e-08!12;UBERON:0007277!3.32e-08!12;UBERON:0004732!1.50e-07!13;UBERON:0004121!1.87e-07!169;UBERON:0002680!1.96e-07!9;UBERON:0001895!1.96e-07!9;UBERON:0010092!1.96e-07!9;UBERON:0002780!2.58e-07!41;UBERON:0001890!2.58e-07!41;UBERON:0006240!2.58e-07!41;UBERON:0000924!3.63e-07!173;UBERON:0006601!3.63e-07!173;UBERON:0003080!4.19e-07!42;UBERON:0000178!9.57e-07!15;UBERON:0000179!9.57e-07!15;UBERON:0000463!9.57e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.44e-17;6!UBERON:0001905;1.29e-13;2!UBERON:0002757;1.29e-13;2!UBERON:0010134;1.29e-13;2!UBERON:0005408;1.29e-13;2!UBERON:0001899;1.29e-13;2!UBERON:0002680;4.67e-12;9!UBERON:0001895;4.67e-12;9!UBERON:0004733;2.77e-09;12!UBERON:0002028;2.77e-09;12!UBERON:0004732;1.22e-08;13!UBERON:0003296;1.86e-07;4!UBERON:0010133;1.86e-07;4!UBERON:0002784;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.44e-17,6;UBERON:0006215,1.44e-17,6;UBERON:0001905,1.37e-13,2;UBERON:0002757,1.37e-13,2;UBERON:0010134,1.37e-13,2;UBERON:0005408,1.37e-13,2;UBERON:0001899,1.37e-13,2;UBERON:0002680,4.67e-12,9;UBERON:0001895,4.67e-12,9;UBERON:0010092,4.67e-12,9;UBERON:0004733,2.77e-09,12;UBERON:0002028,2.77e-09,12;UBERON:0007277,2.77e-09,12;UBERON:0004732,1.22e-08,13;UBERON:0003076,1.31e-07,15;UBERON:0003057,1.31e-07,15;UBERON:0003296,1.92e-07,4;UBERON:0010133,1.92e-07,4;UBERON:0002784,1.92e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422206515571503,0,0,0,0,0,0,0,0,0,13.1555925987561,16.9933043166185,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0.411362273086194,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67043704337145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694499979733169,0,0,0,2.21158519862449,2.65992857058193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,1.50954735955355,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,1.60710550763486,0.336283722218824,0.606965604236632,0.455324382702595,0,0,0,0.271878931907327,0.0657727735628491,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79055697645231,0,0,0.109940516745429,0.301925687133347,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@KLHDC8A | |||
}} |
Revision as of 23:42, 10 January 2014
Short description: | p8@KLHDC8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_KLHDC8A_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -294bp_to_ENST00000539253_5end |
EntrezGene: | KLHDC8A |
HGNC: | 25573 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 8.82e-51 | 2 |
erythroblast | 8.82e-51 | 2 |
megakaryocyte-erythroid progenitor cell | 8.82e-51 | 2 |
erythroid progenitor cell | 8.82e-51 | 2 |
reticulocyte | 8.82e-51 | 2 |
proerythroblast | 8.82e-51 | 2 |
basophilic erythroblast | 8.82e-51 | 2 |
polychromatophilic erythroblast | 8.82e-51 | 2 |
orthochromatic erythroblast | 8.82e-51 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.44e-17 | 6 |
rhombic lip | 1.44e-17 | 6 |
pineal body | 1.37e-13 | 2 |
regional part of epithalamus | 1.37e-13 | 2 |
secretory circumventricular organ | 1.37e-13 | 2 |
circumventricular organ | 1.37e-13 | 2 |
epithalamus | 1.37e-13 | 2 |
regional part of metencephalon | 4.67e-12 | 9 |
metencephalon | 4.67e-12 | 9 |
future metencephalon | 4.67e-12 | 9 |
segmental subdivision of hindbrain | 2.77e-09 | 12 |
hindbrain | 2.77e-09 | 12 |
presumptive hindbrain | 2.77e-09 | 12 |
segmental subdivision of nervous system | 1.22e-08 | 13 |
posterior neural tube | 1.31e-07 | 15 |
chordal neural plate | 1.31e-07 | 15 |
gland of diencephalon | 1.92e-07 | 4 |
neuroendocrine gland | 1.92e-07 | 4 |
regional part of diencephalon | 1.92e-07 | 4 |