FFCP PHASE1:Hg19::chr1:186430222..186430262,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5132 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8759 | |||
|TSSclassifier=strong | |||
|UniProt=P20941,Q9UP22 | |||
|association_with_transcript=0bp_to_ENST00000391997,NM_002597,uc001gsa.2_5end | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_1_at_PDC_5end | |||
|id=chr1:186430222..186430262,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000306;1.44e-09;4!CL:0002222;1.44e-09;4!CL:0002224;1.44e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.44e-09,4;CL:0002222,1.44e-09,4;CL:0002224,1.44e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.31e-12;3 | |||
|ontology_enrichment_disease=DOID:5409!2.85e-16!4;DOID:1325!1.04e-09!7;DOID:3904!1.04e-09!7;DOID:3905!9.52e-08!9 | |||
|ontology_enrichment_disease_v019=DOID:5409;1.22e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.22e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0001905!1.17e-31!2;UBERON:0002757!1.17e-31!2;UBERON:0010134!1.17e-31!2;UBERON:0002784!1.17e-31!2;UBERON:0005408!1.17e-31!2;UBERON:0001899!1.17e-31!2;UBERON:0000970!3.01e-19!20;UBERON:0002104!2.45e-18!21;UBERON:0000020!9.46e-17!23;UBERON:0003296!2.26e-16!4;UBERON:0010133!2.26e-16!4;UBERON:0001882!3.07e-16!1;UBERON:0005403!3.07e-16!1;UBERON:0001032!4.68e-16!24;UBERON:0004456!4.68e-16!24;UBERON:0000966!2.85e-13!5;UBERON:0005388!2.85e-13!5;UBERON:0001802!2.85e-13!5;UBERON:0000019!3.27e-13!19;UBERON:0000047!3.27e-13!19;UBERON:0004088!3.27e-13!19;UBERON:0003072!3.27e-13!19;UBERON:0003071!3.27e-13!19;UBERON:0004128!3.27e-13!19;UBERON:0001456!5.53e-12!21;UBERON:0003056!1.25e-11!61;UBERON:0003075!1.35e-10!86;UBERON:0007284!1.35e-10!86;UBERON:0005743!1.86e-10!86;UBERON:0002346!4.22e-10!90;UBERON:0001894!9.11e-10!7;UBERON:0006222!9.11e-10!7;UBERON:0000073!2.01e-09!94;UBERON:0001016!2.01e-09!94;UBERON:0002360!5.94e-09!2;UBERON:0000094!5.94e-09!2;UBERON:0007645!5.94e-09!2;UBERON:0005085!9.40e-09!29;UBERON:0001017!2.02e-08!82;UBERON:0004121!6.44e-08!169;UBERON:0000924!1.03e-07!173;UBERON:0006601!1.03e-07!173;UBERON:0000033!3.75e-07!123;UBERON:0000153!8.62e-07!129;UBERON:0007811!8.62e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.08e-65;2!UBERON:0002757;1.08e-65;2!UBERON:0010134;1.08e-65;2!UBERON:0005408;1.08e-65;2!UBERON:0001899;1.08e-65;2!UBERON:0003296;1.63e-33;4!UBERON:0010133;1.63e-33;4!UBERON:0002784;1.63e-33;4!UBERON:0001894;1.15e-19;7!UBERON:0000970;1.17e-15;20!UBERON:0002104;5.94e-15;21!UBERON:0000020;1.01e-13;23!UBERON:0001032;3.48e-13;24!UBERON:0004456;3.48e-13;24!UBERON:0010077;1.44e-09;4!UBERON:0005389;1.44e-09;4!UBERON:0000484;1.44e-09;4!UBERON:0000965;1.44e-09;4!UBERON:0001803;1.44e-09;4!UBERON:0000019;5.94e-08;19!UBERON:0000047;5.94e-08;19!UBERON:0004088;5.94e-08;19!UBERON:0010230;5.94e-08;19!UBERON:0000966;6.13e-08;5!UBERON:0005388;6.13e-08;5!UBERON:0001802;6.13e-08;5!UBERON:0001456;2.77e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.08e-65,2;UBERON:0002757,1.08e-65,2;UBERON:0010134,1.08e-65,2;UBERON:0005408,1.08e-65,2;UBERON:0001899,1.08e-65,2;UBERON:0003296,1.63e-33,4;UBERON:0010133,1.63e-33,4;UBERON:0002784,1.63e-33,4;UBERON:0001894,1.15e-19,7;UBERON:0006222,1.15e-19,7;UBERON:0000970,5.94e-15,21;UBERON:0002104,5.94e-15,21;UBERON:0000020,3.48e-13,24;UBERON:0001032,3.48e-13,24;UBERON:0004456,3.48e-13,24;UBERON:0010077,1.44e-09,4;UBERON:0005389,1.44e-09,4;UBERON:0000484,1.44e-09,4;UBERON:0002546,1.44e-09,4;UBERON:0000965,1.44e-09,4;UBERON:0001803,1.44e-09,4;UBERON:0003073,1.44e-09,4;UBERON:0005426,1.44e-09,4;UBERON:0003056,4.72e-09,61;UBERON:0000019,1.33e-07,20;UBERON:0000047,1.33e-07,20;UBERON:0010312,1.33e-07,20;UBERON:0004088,1.33e-07,20;UBERON:0010230,1.33e-07,20;UBERON:0003072,1.33e-07,20;UBERON:0004128,1.33e-07,20;UBERON:0003071,1.33e-07,20;UBERON:0001456,5.40e-07,22;UBERON:0003075,6.96e-07,82;UBERON:0007284,6.96e-07,82;UBERON:0000966,8.02e-07,6;UBERON:0005388,8.02e-07,6;UBERON:0001802,8.02e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5054911512366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,399.759930440762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7854403893223,13.1150651665341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,66.6876157168204,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,371.269125049314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@PDC | |||
}} |
Revision as of 22:55, 10 January 2014
Short description: | p1@PDC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PDC_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000391997, NM_002597, uc001gsa.2_5end |
EntrezGene: | PDC |
HGNC: | 8759 |
UniProt: | P20941Q9UP22 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.44e-09 | 4 |
vertebrate lens cell | 1.44e-09 | 4 |
lens epithelial cell | 1.44e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.22e-09 | 4 |