FFCP PHASE1:Hg19::chr1:145727486..145727495,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5174 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8821 | |||
|TSSclassifier=weak | |||
|UniProt=Q5T2W1,B4DPB9,E7EU02 | |||
|association_with_transcript=-170bp_to_NM_001201325,NM_001201326,NM_002614_5end | |||
|coexpression_cluster_id=C2520 | |||
|description=CAGE_peak_9_at_PDZK1_5end | |||
|id=chr1:145727486..145727495,+ | |||
|ontology_enrichment_celltype=CL:0000349!1.24e-14!3;CL:0002577!1.24e-14!3;CL:0000066!4.11e-11!254;CL:0002536!2.53e-10!2;CL:0002537!1.83e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002577;4.26e-36;3!CL:0000349;1.16e-29;19!CL:0002536;1.37e-24;2!CL:0002253;4.17e-07;2!CL:1000415;4.17e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,6.10e-36,3;CL:0000349,9.14e-30,19;CL:0002536,1.45e-24,2;CL:0002253,3.48e-07,2;CL:1000415,3.70e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!1.90e-12!25;DOID:305!2.27e-11!106;DOID:4468!9.63e-10!2;DOID:0050687!2.67e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:4468;4.17e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,4.42e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!7.95e-25!14;UBERON:0000158!7.95e-25!14;UBERON:0000305!6.56e-16!7;UBERON:0004871!6.93e-14!8;UBERON:0000478!8.97e-14!24;UBERON:0001987!4.37e-11!4;UBERON:0004340!4.37e-11!4;UBERON:0003124!7.65e-11!7;UBERON:0004923!2.16e-07!57;UBERON:0002110!8.03e-07!3;UBERON:0006242!8.03e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;2.88e-27;4!UBERON:0000478;2.20e-23;24!UBERON:0005631;5.56e-19;10!UBERON:0000158;5.56e-19;10!UBERON:0000305;1.04e-15;7!UBERON:0000077;3.13e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.50e-40,14;UBERON:0000158,1.50e-40,14;UBERON:0003124,3.11e-27,7;UBERON:0001987,3.78e-27,4;UBERON:0004340,3.78e-27,4;UBERON:0000478,1.83e-23,24;UBERON:0000305,8.74e-16,7;UBERON:0004871,6.88e-14,8;UBERON:0004923,1.38e-10,66;UBERON:0000995,2.84e-09,21;UBERON:0005795,7.34e-09,22;UBERON:0003975,7.34e-09,22;UBERON:0006554,1.18e-08,47;UBERON:0001008,1.83e-08,48;UBERON:0004175,8.08e-08,25;UBERON:0000077,9.95e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,4.15038607047327,1.31883489114227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21251028578504,4.99306318531491,3.93107381328584,0,0,0,0,0,0,0,0,0,0,0,0,1.32945394550784,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,1.67121139316383,0.593929361665277,0.307160702099232,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0.520855522170466,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91400695839152,0,0,0,0,0,0,0,0,0,0,1.26598838716816,0.326465616318295,1.55488378577335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36885967914362,0,0.426905989478705,0.19980960958213,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,1.26089131678717,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684347351537318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,6.91852100187456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,3.0229862770607,0.9555033757741,0,0,0,0,0,0,0,0,0,0,0,0,2.97838929107265,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.385870790539723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@PDZK1 | |||
}} |
Revision as of 20:33, 10 January 2014
Short description: | p9@PDZK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PDZK1_5end |
Coexpression cluster: | C2520_mesothelioma_Placental_Amniotic_serous_kidney_renal_amniotic |
Association with transcript: | -170bp_to_NM_001201325, NM_001201326, NM_002614_5end |
EntrezGene: | PDZK1 |
HGNC: | 8821 |
UniProt: | Q5T2W1B4DPB9E7EU02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 6.10e-36 | 3 |
extraembryonic cell | 9.14e-30 | 19 |
amniotic epithelial cell | 1.45e-24 | 2 |
epithelial cell of large intestine | 3.48e-07 | 2 |
epithelial cell of gall bladder | 3.70e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.50e-40 | 14 |
membranous layer | 1.50e-40 | 14 |
chorion | 3.11e-27 | 7 |
placenta | 3.78e-27 | 4 |
allantois | 3.78e-27 | 4 |
extraembryonic structure | 1.83e-23 | 24 |
amnion | 8.74e-16 | 7 |
somatic layer of lateral plate mesoderm | 6.88e-14 | 8 |
organ component layer | 1.38e-10 | 66 |
uterus | 2.84e-09 | 21 |
embryonic uterus | 7.34e-09 | 22 |
internal female genitalia | 7.34e-09 | 22 |
urinary system structure | 1.18e-08 | 47 |
renal system | 1.83e-08 | 48 |
internal genitalia | 8.08e-08 | 25 |
mixed endoderm/mesoderm-derived structure | 9.95e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 4.42e-07 | 2 |