FFCP PHASE1:Hg19::chr1:1064360..1064375,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:1064360..1064375,- | |||
|id=chr1:1064360..1064375,- | |||
|ontology_enrichment_celltype=CL:1000497!1.82e-14!18;CL:0002518!1.82e-14!18;CL:0000239!8.36e-14!3;CL:1000615!8.36e-14!3;CL:0002306!8.36e-14!3;CL:1000507!8.63e-13!12;CL:1000494!8.63e-13!12;CL:1000449!1.44e-12!16;CL:0000077!2.49e-10!19;CL:0002681!3.10e-08!13;CL:0002584!3.10e-08!13;CL:0000066!6.33e-08!254;CL:0002178!9.60e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000313;5.53e-17;1!CL:0000159;3.71e-09;2!CL:0000650;6.93e-09;2!CL:1000500;6.93e-09;2!CL:1000618;6.93e-09;2!CL:1001318;6.93e-09;2!CL:0002097;6.93e-09;2!CL:0002173;6.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,5.53e-17,1;CL:0000159,3.71e-09,2;CL:0002097,6.42e-09,2;CL:0000650,8.74e-09,2;CL:1000500,8.74e-09,2;CL:1000618,8.74e-09,2;CL:1001318,8.74e-09,2;CL:0002173,8.74e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.93e-16;1 | |||
|ontology_enrichment_disease=DOID:3493!4.29e-09!2;DOID:299!8.80e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:2152;5.53e-17;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,5.53e-17,1 | |||
|ontology_enrichment_uberon=UBERON:0002113!1.97e-17!27;UBERON:0003918!1.97e-17!27;UBERON:0005095!1.97e-17!27;UBERON:0007687!1.97e-17!27;UBERON:0005172!6.28e-17!55;UBERON:0005173!6.28e-17!55;UBERON:0005409!1.62e-15!35;UBERON:0006555!3.54e-15!17;UBERON:0005103!3.54e-15!17;UBERON:0000083!3.54e-15!17;UBERON:0009201!3.54e-15!17;UBERON:0004819!3.54e-15!17;UBERON:0006553!3.54e-15!17;UBERON:0003074!3.54e-15!17;UBERON:0003060!3.54e-15!17;UBERON:0002417!6.66e-15!61;UBERON:0000916!6.66e-15!61;UBERON:0000489!2.32e-14!32;UBERON:0000080!2.90e-14!18;UBERON:0002120!2.90e-14!18;UBERON:0004875!2.90e-14!18;UBERON:0005721!2.90e-14!18;UBERON:0005754!2.90e-14!18;UBERON:0007297!2.90e-14!18;UBERON:0006853!8.36e-14!3;UBERON:0007685!8.36e-14!3;UBERON:0004134!8.36e-14!3;UBERON:0009773!8.63e-13!12;UBERON:0001231!8.63e-13!12;UBERON:0004810!8.63e-13!12;UBERON:0004876!1.04e-12!20;UBERON:0001155!1.27e-12!9;UBERON:0004211!1.44e-12!16;UBERON:0001285!1.44e-12!16;UBERON:0007684!1.44e-12!16;UBERON:0003220!1.44e-12!16;UBERON:0004208!1.44e-12!16;UBERON:0003887!4.79e-12!21;UBERON:0006554!7.15e-12!44;UBERON:0001008!1.49e-11!45;UBERON:0000160!1.62e-11!27;UBERON:0005177!2.11e-10!107;UBERON:0000059!2.86e-10!11;UBERON:0003064!5.07e-10!37;UBERON:0009569!1.26e-09!113;UBERON:0000058!1.73e-09!26;UBERON:0001851!1.98e-09!16;UBERON:0001225!3.10e-08!13;UBERON:0008987!3.10e-08!13;UBERON:0004921!5.58e-08!129;UBERON:0004185!5.58e-08!129;UBERON:0000481!6.65e-08!347;UBERON:0001007!7.83e-07!155;UBERON:0001555!7.83e-07!155;UBERON:0007026!7.83e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;8.80e-24;22!UBERON:0004911;5.53e-17;1!UBERON:0001155;4.54e-16;9!UBERON:0000160;4.96e-14;17!UBERON:0004921;1.37e-13;33!UBERON:0000059;2.89e-13;11!UBERON:0000945;3.54e-13;5!UBERON:0010039;3.54e-13;5!UBERON:0004909;3.71e-09;2!UBERON:0003567;6.93e-09;2!UBERON:0003838;6.93e-09;2!UBERON:0003586;6.93e-09;2!UBERON:0005169;6.93e-09;2!UBERON:0002321;6.93e-09;2!UBERON:0005215;6.93e-09;2!UBERON:0002303;6.93e-09;2!UBERON:0002319;6.93e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.60e-21,25;UBERON:0004911,5.53e-17,1;UBERON:0001155,4.00e-16,9;UBERON:0000160,4.64e-14,17;UBERON:0000059,2.60e-13,11;UBERON:0004909,3.71e-09,2;UBERON:0003567,8.74e-09,2;UBERON:0003838,8.74e-09,2;UBERON:0003586,8.74e-09,2;UBERON:0005169,8.74e-09,2;UBERON:0002321,8.74e-09,2;UBERON:0005215,8.74e-09,2;UBERON:0002303,8.74e-09,2;UBERON:0002319,8.74e-09,2;UBERON:0000945,1.37e-08,8;UBERON:0010039,1.37e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.699810938274399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0,0.784349769176855,0,0.422206515571503,0,0,0.215915916102139,0,0,1.00337954770971,0.254876273045038,0.831076008928724,0.671624264166535,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55567026775618,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,7.96209544862804,1.50377859655677,3.66618086960175,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,1.06726497369676,0,1.44090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630265458457789,0.659326867049332,1.55028150864625,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.996637174564964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,1.50109113962448,0.260994291965212,0,0,0,0,0.308801447160972,0.219284049578707,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.863710364874486,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92163899910286,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.694567422971502,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92134555298607,0,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:1064360..1064375,- | |||
}} |
Revision as of 15:44, 10 January 2014
Short description: | p@chr1:1064360..1064375, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:1064360..1064375, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 5.53e-17 | 1 |
seromucus secreting cell | 3.71e-09 | 2 |
cortical cell of adrenal gland | 6.42e-09 | 2 |
mesangial cell | 8.74e-09 | 2 |
kidney interstitial cell | 8.74e-09 | 2 |
juxtaglomerular complex cell | 8.74e-09 | 2 |
renal interstitial pericyte | 8.74e-09 | 2 |
extraglomerular mesangial cell | 8.74e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 4.60e-21 | 25 |
epithelium of female gonad | 5.53e-17 | 1 |
colon | 4.00e-16 | 9 |
intestine | 4.64e-14 | 17 |
large intestine | 2.60e-13 | 11 |
epithelium of gonad | 3.71e-09 | 2 |
abdomen connective tissue | 8.74e-09 | 2 |
abdominal segment connective tissue | 8.74e-09 | 2 |
trunk connective tissue | 8.74e-09 | 2 |
interstitial tissue | 8.74e-09 | 2 |
extraglomerular mesangium | 8.74e-09 | 2 |
kidney interstitium | 8.74e-09 | 2 |
juxtaglomerular apparatus | 8.74e-09 | 2 |
mesangium | 8.74e-09 | 2 |
stomach | 1.37e-08 | 8 |
food storage organ | 1.37e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 5.53e-17 | 1 |