FFCP PHASE1:Hg19::chr1:103496790..103496803,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=1301 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=2186 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc001duk.2_5end | |||
|coexpression_cluster_id=C926 | |||
|description=CAGE_peak_5_at_COL11A1_5end | |||
|id=chr1:103496790..103496803,- | |||
|ontology_enrichment_celltype=CL:0000055!7.47e-12!180;CL:0000062!2.45e-10!11;CL:0000375!2.45e-10!11;CL:0000335!2.45e-10!11;CL:0000035!1.43e-07!20;CL:0002580!4.09e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002580;4.00e-11;3!CL:0002615;1.19e-10;3!CL:0002564;1.19e-10;3!CL:0000062;4.78e-08;9!CL:0002559;3.77e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,4.00e-11,3;CL:0002564,8.90e-11,3;CL:0002615,1.20e-10,3;CL:0002559,3.66e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0000358;5.70e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.73e-07,5;DOID:450,9.73e-07,5;DOID:66,9.73e-07,5;DOID:423,9.73e-07,5;DOID:0080000,9.73e-07,5;DOID:11722,9.73e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0003688!3.56e-11!6;UBERON:0002358!3.56e-11!6;UBERON:0003684!3.56e-11!6;UBERON:0001178!3.56e-11!6;UBERON:0002200!6.43e-10!11;UBERON:0006876!6.43e-10!11;UBERON:0000488!5.10e-08!4;UBERON:0002203!8.91e-08!6;UBERON:0001768!8.91e-08!6;UBERON:0007625!1.79e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.77e-11;6!UBERON:0002358;1.77e-11;6!UBERON:0003684;1.77e-11;6!UBERON:0001178;1.77e-11;6!UBERON:0002242;1.19e-10;3!UBERON:0004457;8.10e-08;9!UBERON:0000042;8.10e-08;9!UBERON:0000310;2.17e-07;10!UBERON:0002073;3.77e-07;5!UBERON:0001443;9.32e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.20e-11,6;UBERON:0002358,2.20e-11,6;UBERON:0003684,2.20e-11,6;UBERON:0001178,2.20e-11,6;UBERON:0002242,8.90e-11,3;UBERON:0003068,8.90e-11,3;UBERON:0002328,8.90e-11,3;UBERON:0004880,8.90e-11,3;UBERON:0000310,2.03e-07,10;UBERON:0002073,3.66e-07,5;UBERON:0005086,3.66e-07,5;UBERON:0011135,8.41e-07,5;UBERON:0002216,8.41e-07,5;UBERON:0011134,8.41e-07,5;UBERON:0002209,8.41e-07,5;UBERON:0002213,8.41e-07,5;UBERON:0005856,8.41e-07,5;UBERON:0005866,8.41e-07,5;UBERON:0005863,8.41e-07,5;UBERON:0007844,8.41e-07,5;UBERON:0011138,8.41e-07,5;UBERON:0001130,8.41e-07,5;UBERON:0001066,8.41e-07,5;UBERON:0001468,8.41e-07,5;UBERON:0001443,8.79e-07,11 | |||
|phase1_expression=0.363356758541113,2.78330681058278,0.281908808191942,1.0007329835313,1.78784437770915,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0.313454721478088,0.85870796139317,0.821246550437305,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0.795285947051099,8.75942766544745,0.661743720148475,0.665188192387692,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0.354668382198357,0,0,0,0,0,0,0.454072282934794,4.03323147135999,0,0,0,0,0,0,0,0,0,0,0,1.23633464639278,0,0,0,0,0,0,0,0.150238058906597,0,1.25572744982203,1.06778694409284,0,0,0,0.257640540045629,0.558350568994769,0,0,0,0,0,1.06502877754984,0.10075209822764,0.169560592310488,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,3.85944562915731,0,4.17931135228781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411309970813294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0.479249710983165,2.29723871668228,0,0.434343920002738,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2269149171914,1.50051156317903,0.271265023699736,0,0.356857977594324,0,0.117141414992713,0.902838299183157,2.27407504055985,2.0694614258501,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0.744323423456331,2.455391572609,2.24528075546459,0.128139149255701,1.02341449813341,0.965123526861645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0.325378394664303,0,0.732555718546747,0.330037999682352,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0.580066775656914,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41837027607914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69904730449319,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,1.06336685823198,0,0,0,0,0,0.214821114084977,0,0.398095888698616,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0.303859956177382,0.276516872303462,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0.381382095467167,0,1.19349733269765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.527613733078862,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0.215927591218621,0,0,0,1.04617282831313,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0.4226557275834,0.679708458751268,0.0939839179798536,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,1.11598505450025,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0.23806443146374,0,0,0.33639558774184,0,0,0,0,0,0,1.33064142618405,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p5@COL11A1 | |||
}} |
Revision as of 19:51, 10 January 2014
Short description: | p5@COL11A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_5_at_COL11A1_5end |
Coexpression cluster: | C926_Chondrocyte_Adipocyte_tenocyte_Wilms_Preadipocyte_Hair_Fibroblast |
Association with transcript: | 0bp_to_uc001duk.2_5end |
EntrezGene: | COL11A1 |
HGNC: | 2186 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 4.00e-11 | 3 |
nucleus pulposus cell of intervertebral disc | 8.90e-11 | 3 |
adipocyte of omentum tissue | 1.20e-10 | 3 |
hair follicle cell | 3.66e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.20e-11 | 6 |
peritoneum | 2.20e-11 | 6 |
abdominal cavity | 2.20e-11 | 6 |
visceral peritoneum | 2.20e-11 | 6 |
nucleus pulposus | 8.90e-11 | 3 |
axial mesoderm | 8.90e-11 | 3 |
notochord | 8.90e-11 | 3 |
chordamesoderm | 8.90e-11 | 3 |
breast | 2.03e-07 | 10 |
hair follicle | 3.66e-07 | 5 |
hair follicle placode | 3.66e-07 | 5 |
intervertebral cartilage | 8.41e-07 | 5 |
symphysis | 8.41e-07 | 5 |
nonsynovial joint | 8.41e-07 | 5 |
fibrous joint | 8.41e-07 | 5 |
cartilaginous joint | 8.41e-07 | 5 |
developing mesenchymal condensation | 8.41e-07 | 5 |
pre-cartilage condensation | 8.41e-07 | 5 |
cartilaginous condensation | 8.41e-07 | 5 |
cartilage element | 8.41e-07 | 5 |
post-cranial axial skeletal system | 8.41e-07 | 5 |
vertebral column | 8.41e-07 | 5 |
intervertebral disk | 8.41e-07 | 5 |
intervertebral joint | 8.41e-07 | 5 |
chest | 8.79e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.73e-07 | 5 |
myotonic disease | 9.73e-07 | 5 |
muscle tissue disease | 9.73e-07 | 5 |
myopathy | 9.73e-07 | 5 |
muscular disease | 9.73e-07 | 5 |
myotonic dystrophy | 9.73e-07 | 5 |