FFCP PHASE1:Hg19::chr19:47975106..47975136,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6543 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11069 | |||
|TSSclassifier=strong | |||
|UniProt=F5GYS4,F5H6L7 | |||
|association_with_transcript=0bp_to_ENST00000539381,ENST00000542837_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_SLC8A2_5end | |||
|id=chr19:47975106..47975136,- | |||
|ontology_enrichment_celltype=CL:0000540!1.66e-10!6;CL:0000031!1.66e-10!6;CL:0000404!1.66e-10!6;CL:0000047!2.23e-10!8;CL:0002322!8.15e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.03e-14;6!CL:0000404;2.03e-14;6!CL:0002322;5.84e-12;5!CL:0002319;4.26e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.73e-14,8;CL:0000540,1.80e-14,6;CL:0000031,1.80e-14,6;CL:0000404,1.80e-14,6;CL:0002322,4.94e-12,5;CL:0002319,4.15e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000031;2.03e-14;6!UBERON:0006601;7.16e-13;82!UBERON:0006215;2.59e-09;3 | |||
|ontology_enrichment_disease=DOID:3095!5.51e-07!22;DOID:2994!5.51e-07!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;4.33e-54;32!UBERON:0001893;1.88e-52;34!UBERON:0002619;5.39e-52;22!UBERON:0002791;1.47e-50;32!UBERON:0003528;4.40e-49;34!UBERON:0002020;4.40e-49;34!UBERON:0001950;5.23e-47;20!UBERON:0002780;3.18e-46;41!UBERON:0001890;3.18e-46;41!UBERON:0000956;3.31e-45;25!UBERON:0000203;3.31e-45;25!UBERON:0000073;2.71e-40;53!UBERON:0002616;2.71e-40;53!UBERON:0000955;7.08e-31;68!UBERON:0001017;9.98e-27;75!UBERON:0001016;3.05e-23;83!UBERON:0002420;4.90e-17;9!UBERON:0007245;4.90e-17;9!UBERON:0010009;4.90e-17;9!UBERON:0010011;4.90e-17;9!UBERON:0000454;4.90e-17;9!UBERON:0000200;9.15e-16;6!UBERON:0000349;8.93e-14;5!UBERON:0001871;9.65e-14;6!UBERON:0001872;1.30e-13;5!UBERON:0002021;2.26e-13;5!UBERON:0000125;1.23e-12;9!UBERON:0002308;1.23e-12;9!UBERON:0009663;2.06e-12;7!UBERON:0007023;4.56e-12;114!UBERON:0004732;5.74e-11;13!UBERON:0000369;1.21e-10;4!UBERON:0002435;1.21e-10;4!UBERON:0000204;1.21e-10;4!UBERON:0004733;2.53e-09;12!UBERON:0002028;2.53e-09;12!UBERON:0011216;5.33e-09;132!UBERON:0001870;8.37e-09;3!UBERON:0005383;3.18e-08;3!UBERON:0005382;3.18e-08;3!UBERON:0000922;1.67e-07;49!UBERON:0002680;4.79e-07;9!UBERON:0001895;4.79e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.94e-79,81;UBERON:0001016,1.53e-72,89;UBERON:0000073,2.94e-71,53;UBERON:0002616,2.94e-71,53;UBERON:0001049,2.71e-70,56;UBERON:0005068,2.71e-70,56;UBERON:0006241,2.71e-70,56;UBERON:0007135,2.71e-70,56;UBERON:0000955,9.80e-65,68;UBERON:0006238,9.80e-65,68;UBERON:0002780,3.84e-64,41;UBERON:0001890,3.84e-64,41;UBERON:0003080,3.84e-64,41;UBERON:0006240,3.84e-64,41;UBERON:0001869,6.34e-61,32;UBERON:0001893,6.97e-61,34;UBERON:0003528,1.43e-56,34;UBERON:0002020,1.43e-56,34;UBERON:0002791,1.85e-56,32;UBERON:0002619,4.73e-52,22;UBERON:0002346,4.70e-51,86;UBERON:0003075,2.86e-49,82;UBERON:0007284,2.86e-49,82;UBERON:0001950,4.76e-47,20;UBERON:0003056,2.03e-45,61;UBERON:0000956,2.95e-45,25;UBERON:0000203,2.95e-45,25;UBERON:0010371,4.04e-40,104;UBERON:0007023,4.11e-39,114;UBERON:0004121,4.00e-37,171;UBERON:0000924,4.00e-37,171;UBERON:0006601,4.00e-37,171;UBERON:0011216,1.09e-28,223;UBERON:0010314,1.22e-27,132;UBERON:0002420,4.25e-17,9;UBERON:0007245,4.25e-17,9;UBERON:0010009,4.25e-17,9;UBERON:0010011,4.25e-17,9;UBERON:0000454,4.25e-17,9;UBERON:0000200,9.52e-16,6;UBERON:0000025,3.91e-15,192;UBERON:0000349,8.60e-14,5;UBERON:0001871,9.56e-14,6;UBERON:0001872,1.27e-13,5;UBERON:0002021,2.07e-13,5;UBERON:0000125,1.09e-12,9;UBERON:0002308,1.09e-12,9;UBERON:0009663,1.82e-12,7;UBERON:0004111,3.35e-11,240;UBERON:0004732,5.13e-11,13;UBERON:0000369,1.10e-10,4;UBERON:0002435,1.10e-10,4;UBERON:0000204,1.10e-10,4;UBERON:0010082,1.10e-10,4;UBERON:0004733,2.45e-09,12;UBERON:0002028,2.45e-09,12;UBERON:0007277,2.45e-09,12;UBERON:0003076,2.47e-09,15;UBERON:0003057,2.47e-09,15;UBERON:0001870,8.60e-09,3;UBERON:0000922,1.84e-08,592;UBERON:0005383,2.84e-08,3;UBERON:0005382,2.84e-08,3;UBERON:0000483,1.70e-07,306;UBERON:0000119,2.58e-07,309;UBERON:0000923,4.39e-07,560;UBERON:0010316,4.39e-07,560;UBERON:0005291,4.39e-07,560;UBERON:0006598,4.39e-07,560;UBERON:0010317,4.39e-07,560;UBERON:0002532,4.39e-07,560;UBERON:0002680,4.79e-07,9;UBERON:0001895,4.79e-07,9;UBERON:0010092,4.79e-07,9;UBERON:0002050,6.47e-07,564 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53643503843824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41526377162867,2.78312513475119,4.53156377191122,2.798848485415,3.5324919122588,2.18986415445498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.8083912314573,6.18631050222156,5.52803675603351,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728163130497081,0,0,0,0,0,15.9063623642608,16.45832172003,0,0,0,0.597743964753209,0,0.251932747854276,0,0,0,0,0,0,1.08507746200627,0,0,25.2026513984757,13.2658380371447,49.9034495002985,0,0,0,0,0,0,1.03423011972439,0.583209226766509,0.347249989866585,3.54296554325536,6.87399700164825,22.8872604475625,24.9909127444568,43.1499523672179,23.2548520983211,0,0,1.00035336054936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06149077404007,2.4441205797345,0,0,0,2.42644078730437,0,3.27970224015475,0,0,0,1.57833761139756,0,23.8736754071782,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0,3.61850119435151,0.451961481561065,0,0,23.0451297279398,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,4.80336230967832,1.09524303113594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.4473500738977,14.8461712661617,4.34033500855552,2.88832816854191,3.73896304226267,0,0,29.7065332057741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,2.51241943311111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2910226995048,14.1550467286277,11.1419928328785,0.573409195690071,2.3295100822739,1.98708489412427,0.968440444553616,0,0,0,0,3.27834434064817,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6458995836833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0.157265941855896,0.218419276384028,0,2.12574920101683,1.48722917110803,0,0,0,3.20228299314188,0,0,17.5345784513335,2.8339315265117,6.70462208040035,33.0237346427616,21.426094178846,20.0556032146232,19.0541261845584,2.85538840518309,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,16.0064075545595,10.9350933805939,8.06078506354618,17.6930110441,24.6138664058199,0,0,0.175871244359621,0,14.4639495687137,13.7876326109718,0.606965604236632,2.50428410486427,0,0,0,1.08751572762931,19.0741043332262,0,0,0.39246546425257,6.75597036638808,0,0.913158720509496,0,0,0.643288897589907,4.26636751678362,0.116241425368125,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,2.38740930193642,0,0,4.17773963632631,0,0.385870790539723,0,0,0.735444965261716,0,0.588925401344836,0.297046400327086,2.5359343655004,0,0,0,0,0,0,0,0,0,0.143339583151451,0.157771562193185,33.7917706248846,31.8536003948476,0.5290268405154,0,0,0,0.504665699340316,0.109265571963696,0.126698501011437,1.1218771271618,0,1.19463369395298,1.0028301571695,0.151557396436479,0,0.829169439458779,0.930896962757057,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4668973301944,0.406896178315738,0,0,0 | |||
|short_description=p3@SLC8A2 | |||
}} |
Revision as of 00:11, 21 January 2014
Short description: | p3@SLC8A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC8A2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000539381, ENST00000542837_5end |
EntrezGene: | SLC8A2 |
HGNC: | 11069 |
UniProt: | F5GYS4F5H6L7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.73e-14 | 8 |
neuron | 1.80e-14 | 6 |
neuroblast | 1.80e-14 | 6 |
electrically signaling cell | 1.80e-14 | 6 |
embryonic stem cell | 4.94e-12 | 5 |
neural cell | 4.15e-07 | 25 |