FFCP PHASE1:Hg19::chr19:13135386..13135435,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4784 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7788 | |||
|TSSclassifier=strong | |||
|UniProt=F8W8H9,F5H5Z3 | |||
|association_with_transcript=0bp_to_ENST00000264825,ENST00000438869,uc002mwf.2,uc010xmx.1_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_NFIX_5end | |||
|id=chr19:13135386..13135435,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.94e-13!180;CL:0002620!5.13e-09!23;CL:0000057!3.60e-08!75 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.64e-10;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.03e-10,23;CL:0000057,9.07e-09,76 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.03e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.38e-39!57;UBERON:0005068!7.38e-39!57;UBERON:0006241!7.38e-39!57;UBERON:0007135!7.38e-39!57;UBERON:0001017!9.60e-34!82;UBERON:0002616!3.46e-33!59;UBERON:0005743!6.72e-32!86;UBERON:0000073!3.15e-31!94;UBERON:0001016!3.15e-31!94;UBERON:0007023!1.22e-30!115;UBERON:0000955!7.43e-30!69;UBERON:0006238!7.43e-30!69;UBERON:0002780!9.01e-30!41;UBERON:0001890!9.01e-30!41;UBERON:0006240!9.01e-30!41;UBERON:0003075!1.22e-28!86;UBERON:0007284!1.22e-28!86;UBERON:0003080!1.49e-28!42;UBERON:0002346!1.13e-26!90;UBERON:0001893!7.52e-26!34;UBERON:0002020!1.15e-25!34;UBERON:0003528!1.15e-25!34;UBERON:0002791!5.46e-25!33;UBERON:0001869!3.29e-24!32;UBERON:0000475!2.03e-21!365;UBERON:0004121!2.59e-21!169;UBERON:0000924!2.27e-20!173;UBERON:0006601!2.27e-20!173;UBERON:0003056!2.30e-19!61;UBERON:0000033!5.72e-19!123;UBERON:0000956!6.37e-19!25;UBERON:0000203!6.37e-19!25;UBERON:0002619!1.62e-18!22;UBERON:0000153!8.27e-18!129;UBERON:0007811!8.27e-18!129;UBERON:0001950!4.40e-17!20;UBERON:0000025!7.08e-17!194;UBERON:0000483!1.18e-16!309;UBERON:0000119!2.77e-16!312;UBERON:0004111!3.54e-16!241;UBERON:0000477!8.97e-14!286;UBERON:0003076!3.13e-11!15;UBERON:0003057!3.13e-11!15;UBERON:0000468!2.49e-10!659;UBERON:0004732!5.58e-10!13;UBERON:0000467!6.20e-10!625;UBERON:0000480!8.56e-10!626;UBERON:0004733!3.69e-09!12;UBERON:0002028!3.69e-09!12;UBERON:0007277!3.69e-09!12;UBERON:0000481!8.71e-09!347;UBERON:0000479!1.08e-08!787;UBERON:0002308!3.50e-08!9;UBERON:0000125!3.50e-08!9;UBERON:0002420!3.99e-08!9;UBERON:0007245!3.99e-08!9;UBERON:0010009!3.99e-08!9;UBERON:0010011!3.99e-08!9;UBERON:0000454!3.99e-08!9;UBERON:0002199!4.09e-08!45;UBERON:0002416!4.09e-08!45;UBERON:0002097!2.87e-07!40;UBERON:0001871!4.78e-07!7;UBERON:0002680!5.79e-07!9;UBERON:0001895!5.79e-07!9;UBERON:0010092!5.79e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.51e-29;34!UBERON:0003528;8.52e-29;34!UBERON:0002020;8.52e-29;34!UBERON:0001869;1.29e-28;32!UBERON:0002791;1.63e-28;32!UBERON:0002780;3.70e-28;41!UBERON:0001890;3.70e-28;41!UBERON:0000073;1.75e-26;53!UBERON:0002616;1.75e-26;53!UBERON:0002619;1.83e-26;22!UBERON:0001950;2.33e-24;20!UBERON:0000956;4.74e-24;25!UBERON:0000203;4.74e-24;25!UBERON:0000955;1.04e-17;68!UBERON:0001017;3.70e-17;75!UBERON:0001016;2.10e-16;83!UBERON:0004732;2.41e-12;13!UBERON:0000125;3.06e-11;9!UBERON:0002308;3.06e-11;9!UBERON:0004733;3.63e-11;12!UBERON:0002028;3.63e-11;12!UBERON:0002420;3.70e-11;9!UBERON:0007245;3.70e-11;9!UBERON:0010009;3.70e-11;9!UBERON:0010011;3.70e-11;9!UBERON:0000454;3.70e-11;9!UBERON:0007023;8.72e-10;114!UBERON:0009663;4.31e-09;7!UBERON:0000200;1.01e-08;6!UBERON:0001871;1.53e-08;6!UBERON:0002298;3.68e-08;6!UBERON:0002680;5.12e-08;9!UBERON:0001895;5.12e-08;9!UBERON:0002021;2.94e-07;5!UBERON:0001872;4.27e-07;5!UBERON:0000349;7.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.01e-51,56;UBERON:0005068,1.01e-51,56;UBERON:0006241,1.01e-51,56;UBERON:0007135,1.01e-51,56;UBERON:0000073,1.78e-48,53;UBERON:0002616,1.78e-48,53;UBERON:0001017,6.47e-45,81;UBERON:0001016,8.09e-44,89;UBERON:0000955,2.75e-38,68;UBERON:0006238,2.75e-38,68;UBERON:0002780,2.89e-38,41;UBERON:0001890,2.89e-38,41;UBERON:0003080,2.89e-38,41;UBERON:0006240,2.89e-38,41;UBERON:0003075,8.63e-36,82;UBERON:0007284,8.63e-36,82;UBERON:0001893,7.11e-34,34;UBERON:0003528,1.29e-33,34;UBERON:0002020,1.29e-33,34;UBERON:0002346,4.06e-33,86;UBERON:0007023,6.87e-32,114;UBERON:0001869,1.70e-31,32;UBERON:0002791,2.08e-31,32;UBERON:0010371,4.28e-29,104;UBERON:0002619,2.39e-26,22;UBERON:0001950,3.01e-24,20;UBERON:0000956,8.01e-24,25;UBERON:0000203,8.01e-24,25;UBERON:0003056,8.59e-24,61;UBERON:0010314,1.49e-23,132;UBERON:0004121,9.84e-23,171;UBERON:0000924,9.84e-23,171;UBERON:0006601,9.84e-23,171;UBERON:0000025,2.91e-15,192;UBERON:0003076,3.90e-14,15;UBERON:0003057,3.90e-14,15;UBERON:0004111,6.81e-13,240;UBERON:0011216,1.13e-12,223;UBERON:0004732,2.60e-12,13;UBERON:0000125,3.10e-11,9;UBERON:0002308,3.10e-11,9;UBERON:0002420,3.74e-11,9;UBERON:0007245,3.74e-11,9;UBERON:0010009,3.74e-11,9;UBERON:0010011,3.74e-11,9;UBERON:0000454,3.74e-11,9;UBERON:0004733,3.89e-11,12;UBERON:0002028,3.89e-11,12;UBERON:0007277,3.89e-11,12;UBERON:0000483,2.28e-09,306;UBERON:0009663,4.31e-09,7;UBERON:0000119,4.86e-09,309;UBERON:0002199,9.29e-09,46;UBERON:0002416,9.29e-09,46;UBERON:0000200,1.02e-08,6;UBERON:0001871,1.94e-08,6;UBERON:0002298,3.77e-08,6;UBERON:0002097,4.34e-08,41;UBERON:0002680,5.43e-08,9;UBERON:0001895,5.43e-08,9;UBERON:0010092,5.43e-08,9;UBERON:0002021,2.64e-07,5;UBERON:0001872,4.80e-07,5;UBERON:0000349,7.13e-07,5;UBERON:0000479,7.72e-07,773 | |||
|phase1_expression=1.2717486548939,1.07050261945492,1.12763523276777,2.00146596706261,0.446961094427288,0.872338524100369,0,1.26343974685366,1.56711376919903,0,0,0,0,0.123766352960047,0.662794751455832,0.672325146451775,0,0,0.975865597581014,0.861847406537515,1.22400414746552,1.56727360739044,0.85870796139317,0.821246550437305,1.12988375635323,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0.361439152384566,3.00802746381534,2.75208386025565,5.5670016293577,0.486634870302636,0.661743720148475,0.443458794925128,0.087834785693126,6.81091192588106,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0,1.49091585508596,1.2663051166458,1.72131935057184,3.44203944898576,2.4826786753885,0.560677600142307,0,0,0.622422070799533,0.269421344139376,0,0.605429710579726,0,0,0.624320153660641,2.2818872861778,2.98897361103602,0.117434498643765,0,0.140450806702248,1.22492502752936,0,1.13658359293342,0,0,0,0,0.336672227908132,0,3.60183350129438,0,0,0,0,1.97328599257748,4.27114777637135,6.99375273826554,2.40072876867522,5.97704669582946,2.57640540045629,3.35010341396862,3.37552664482532,5.35903528386592,4.03894038790583,6.44349290496095,3.87950536365149,1.77504796258307,1.91428986632517,2.03472710772585,0,0,0,0,0,0,0,0,0.36497735907583,1.56449532329816,1.28648187638577,0,2.78620756819187,3.60939740834793,0.118306800039844,0,0,0,0,0,0,0,0,0,1.40241773803446,0,1.47008711385542,0,0,1.18157981336281,0,0,0.171567810298526,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0.463721619900307,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.447792613514241,0.871901815541886,0,0,0,0.207328115540772,0,0,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0,0.258543431515556,3.57656445851882,0,0.531876233169741,0,1.28603687131071,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,1.4377491329495,1.14861935834114,2.85273810081437,0.144781306667579,1.02738161275192,0.895304816199478,0,0,0,0,2.54094624222463,6.50699269288109,9.27946575333234,2.01019518401218,3.82763250991898,0,0,0,0.49076596687656,0,0,1.24782516918484,2.3195768543631,0.315404830067869,1.87426263988341,3.00946099727719,2.27407504055985,0,2.65690239414175,2.02806085395873,0.868836144680828,0.391602314925481,0,0,0,0,0,0,0,2.97729369382532,1.68808170616869,1.96462066103151,1.92208723883551,2.55853624533352,0.804269605718038,0,0.925258162815933,2.84098760501003,1.64254312027618,1.03850885836724,1.27831416305955,0,0.200506470303285,0.184161977871793,1.14814448164607,1.45672934405374,1.31124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60643540767028,0,0,0.574265537996172,0.650060246036521,3.21367859688319,0.773365746336976,0.462145851343933,0.460511024178389,0.137836572484531,0.107420244868274,0.580066775656914,0.511359764496605,2.04773681987496,0.165284915360978,0.192190067365106,0,0,4.64845549297286,2.83331112147576,0.6970372701606,2.15623506123262,0.532306030317022,0,1.66791797193528,0.143124886741991,0,0,0.190630193923825,1.535386747868,3.42351190427136,3.81843897511124,0.78494864019923,0,0,0,1.2130948894399,1.58510321173008,0,0.48763373908959,1.70599442741899,3.16950440270266,1.22849920267187,0.848432591722276,7.910568163417,6.06501877900737,1.99031692572366,1.75380354101505,1.73632660280006,0.655894752046633,0,0,0.281695602532241,0.430234056612155,0,0,0.709522128141196,1.89996871767898,0.987884678879706,0,0.699869440489966,0,0,0,4.23647103495506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,11.9297717731956,12.5195780605356,0,0,0.422250816255987,2.39097585901284,0,0.251932747854276,0,0,1.24415835064723,0.179736702294654,0,0,0.591860433821602,0,0,20.3559876679996,31.3556171787057,11.9768278800717,0,0,0,0,0,0,1.03423011972439,0,0.173624994933292,12.4003794013937,6.75340056302285,35.0937993529291,64.2465500200415,26.3037380868657,15.795748595086,0,0,3.61666214967846,0,0,0,0,0,1.19076871422421,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.176915129006678,0,0,0,0,36.1270072776429,0,16.3985112007737,0,0,0,0.394584402849391,1.20990716048664,6.1214552326098,2.02197054811161,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.775912131907355,0,1.58186518546373,0,0,33.9978974283069,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0.611989305817931,0,23.4163912596818,22.8631982749628,0,0,0,1.39641200636127,1.14580212005842,0.717873024576814,0,0.429226048136571,0.446342914883745,0.134366944973453,0.720599767084807,0,0,0,0,0,0,9.54275627771164,15.6633917028312,0,0,0,0,0,30.4962774423284,0,0,0.0524545881349981,0,0,0,0,0,0,8.6879936280594,0,2.93928624098468,0,0,0.340776043570843,0,0.732761168390412,0,15.7725206761092,20.0993554648889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| |||
|short_description=p4@NFIX | |||
}} |
Revision as of 21:36, 20 January 2014
Short description: | p4@NFIX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NFIX_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000264825, ENST00000438869, uc002mwf.2, uc010xmx.1_5end |
EntrezGene: | NFIX |
HGNC: | 7788 |
UniProt: | F8W8H9F5H5Z3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.03e-10 | 23 |
fibroblast | 9.07e-09 | 76 |