FFCP PHASE1:Hg19::chr19:12941474..12941498,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83546 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30310 | |||
|TSSclassifier=not | |||
|UniProt=Q9BSG5 | |||
|association_with_transcript=-267bp_to_ENST00000458671,NM_001080997,uc002mvi.2_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_1_at_RTBDN_5end | |||
|id=chr19:12941474..12941498,- | |||
|ontology_enrichment_celltype=CL:0000066!2.45e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.43e-09;1!CL:0000164;1.43e-09;1!CL:0000502;1.43e-09;1!CL:0000172;1.43e-09;1!CL:0000173;1.43e-09;1!CL:0002553;2.16e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.43e-09,1;CL:0000164,1.43e-09,1;CL:0000502,1.43e-09,1;CL:0000172,1.43e-09,1;CL:0000173,1.43e-09,1;CL:0002351,1.43e-09,1;CL:0002553,2.16e-09,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.43e-09;1!UBERON:0008425;4.50e-09;1 | |||
|ontology_enrichment_disease=DOID:0050687!2.68e-24!143;DOID:305!6.15e-21!106;DOID:162!8.42e-20!235;DOID:14566!4.88e-19!239;DOID:0050686!4.75e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.43e-09;1!DOID:3119;2.27e-09;14!DOID:4960;2.55e-09;1!DOID:0070004;2.55e-09;1!DOID:5409;4.79e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.43e-09,1;DOID:3119,2.37e-09,14;DOID:4960,2.55e-09,1;DOID:0070004,2.55e-09,1;DOID:5409,4.89e-09,4;DOID:305,1.08e-08,106;DOID:0050687,2.29e-08,143;DOID:162,1.21e-07,235;DOID:14566,2.04e-07,239;DOID:0050686,2.05e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.64e-18!9;UBERON:0001557!4.83e-11!19;UBERON:0008947!1.51e-10!38;UBERON:0003258!1.51e-10!38;UBERON:0003296!2.40e-10!4;UBERON:0010133!2.40e-10!4;UBERON:0000072!4.96e-09!46;UBERON:0000065!2.91e-08!53;UBERON:0001004!2.59e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;2.25e-33;4!UBERON:0010133;2.25e-33;4!UBERON:0001894;3.40e-19;7!UBERON:0001905;7.07e-18;2!UBERON:0002757;7.07e-18;2!UBERON:0010134;7.07e-18;2!UBERON:0005408;7.07e-18;2!UBERON:0001899;7.07e-18;2!UBERON:0000007;2.54e-17;2!UBERON:0002784;2.17e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,2.35e-33,4;UBERON:0010133,2.35e-33,4;UBERON:0001894,3.48e-19,7;UBERON:0006222,3.48e-19,7;UBERON:0001905,7.07e-18,2;UBERON:0002757,7.07e-18,2;UBERON:0010134,7.07e-18,2;UBERON:0005408,7.07e-18,2;UBERON:0001899,7.07e-18,2;UBERON:0000007,2.65e-17,2;UBERON:0002784,2.17e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.946454400318751,1.01150814046861,0.964044119533928,0.661763836394364,0.435758888184812,0.71181185733329,0.404493924480493,0.196221465125346,1.53898862778556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,1.30998378285754,0,0,3.90051844971174,0,0,0,0,0,0,0,0.988823245360557,0,0,0,6.55025144421118,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22443999994674,0,0,0.254253650292766,0,2.75794698593172,0,0.173624994933292,0,0,0,0,0,9.87234287192876,0.10893846351899,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,1.35357396370308,0.980312671588698,1.34257269580674,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0.284609546029793,0.138674673013139,0,0.685946781900644,0,0,0.343972064943233,0.483781656445426,0.219267951258557,0.0821154570532092,0,0,103.951140759045,0,0,0,0,0.240476460754601,0,0,0,0,15.7867398033007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0.412079291905832,0.26961417541674,0,0.169346664131569,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0.13223260174269,0,0.704815022316672,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,5.85530930846773,0,0.920529751259204,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,8.80627823114017,0,0,0,0,0,0,0,0,0,0,11.385135346119,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,348.741895156765,375.292633996208,25.4925553779385,9.7894742281058,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0.647782773655864,0,59.2540551224481,0.47404083519818,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0.883352102537187,0,0,0,0,0,0.467878926924211,1.19370465096821,0,0,3.4081560191083,27.9281260598346,0.385870790539723,0,41.387922079814,0,19.561153409435,0,0,0,0,0,0,0,0,0,0.240724100067505,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.833565680400634,0.535928260312357,0,0,0,0,0,0,0.112131862580613,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0.106727345877715,0,0.718601616852695,0,0,0,0,0,0 | |||
|short_description=p1@RTBDN | |||
}} |
Revision as of 21:33, 20 January 2014
Short description: | p1@RTBDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RTBDN_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -267bp_to_ENST00000458671, NM_001080997, uc002mvi.2_5end |
EntrezGene: | RTBDN |
HGNC: | 30310 |
UniProt: | Q9BSG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.43e-09 | 1 |
enteroendocrine cell | 1.43e-09 | 1 |
type D enteroendocrine cell | 1.43e-09 | 1 |
somatostatin secreting cell | 1.43e-09 | 1 |
pancreatic D cell | 1.43e-09 | 1 |
progenitor cell of endocrine pancreas | 1.43e-09 | 1 |
lung fibroblast | 2.16e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 2.35e-33 | 4 |
neuroendocrine gland | 2.35e-33 | 4 |
diencephalon | 3.48e-19 | 7 |
future diencephalon | 3.48e-19 | 7 |
pineal body | 7.07e-18 | 2 |
regional part of epithalamus | 7.07e-18 | 2 |
secretory circumventricular organ | 7.07e-18 | 2 |
circumventricular organ | 7.07e-18 | 2 |
epithalamus | 7.07e-18 | 2 |
pituitary gland | 2.65e-17 | 2 |
regional part of diencephalon | 2.17e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.43e-09 | 1 |
gastrointestinal system cancer | 2.37e-09 | 14 |
bone marrow cancer | 2.55e-09 | 1 |
myeloma | 2.55e-09 | 1 |
lung small cell carcinoma | 4.89e-09 | 4 |
carcinoma | 1.08e-08 | 106 |
cell type cancer | 2.29e-08 | 143 |
cancer | 1.21e-07 | 235 |
disease of cellular proliferation | 2.04e-07 | 239 |
organ system cancer | 2.05e-07 | 137 |