FFCP PHASE1:Hg19::chr18:6286777..6286797,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_at_chr18:6286777..6286797,+ | |||
|id=chr18:6286777..6286797,+ | |||
|ontology_enrichment_celltype=CL:0000349!2.69e-16!3;CL:0002577!2.69e-16!3;CL:0002536!2.46e-11!2;CL:0002537!5.70e-10!5;CL:0002541!1.00e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.52e-83;19!CL:0002577;4.94e-60;3!CL:0002536;3.01e-40;2!CL:0002537;1.67e-36;5!CL:0002541;7.76e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.52e-83,19;CL:0002577,4.46e-60,3;CL:0002536,3.01e-40,2;CL:0002537,1.78e-36,5;CL:0002541,7.76e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.25e-42!14;UBERON:0000158!2.25e-42!14;UBERON:0003124!6.20e-26!7;UBERON:0000478!9.31e-24!24;UBERON:0001987!6.14e-21!4;UBERON:0004340!6.14e-21!4;UBERON:0000305!2.03e-18!7;UBERON:0004871!4.41e-16!8;UBERON:0005795!2.89e-13!22;UBERON:0004923!3.31e-12!57;UBERON:0000995!9.78e-11!21;UBERON:0001870!1.20e-10!2;UBERON:0003975!3.33e-10!22;UBERON:0001950!4.50e-10!20;UBERON:0002619!4.05e-09!22;UBERON:0004175!7.29e-09!25;UBERON:0003133!2.33e-08!48;UBERON:0000064!2.72e-08!219;UBERON:0000956!5.79e-08!25;UBERON:0000203!5.79e-08!25;UBERON:0001869!7.15e-08!32;UBERON:0000476!1.00e-07!3;UBERON:0000920!1.00e-07!3;UBERON:0000200!1.25e-07!6;UBERON:0002791!1.32e-07!33;UBERON:0002020!2.35e-07!34;UBERON:0003528!2.35e-07!34;UBERON:0001893!2.35e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;9.65e-71;10!UBERON:0000158;9.65e-71;10!UBERON:0000305;1.34e-70;7!UBERON:0000478;3.88e-66;24!UBERON:0001987;2.87e-45;4!UBERON:0002702;4.52e-11;2!UBERON:0004923;2.05e-08;55!UBERON:0003124;7.76e-08;3!UBERON:0000920;7.76e-08;3!UBERON:0001870;8.29e-08;3!UBERON:0000077;2.74e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.31e-113,14;UBERON:0000158,2.31e-113,14;UBERON:0000305,1.44e-70,7;UBERON:0000478,3.88e-66,24;UBERON:0004871,8.25e-62,8;UBERON:0003124,1.77e-45,7;UBERON:0001987,2.66e-45,4;UBERON:0004340,2.66e-45,4;UBERON:0004923,6.09e-24,66;UBERON:0002702,4.52e-11,2;UBERON:0000995,3.26e-09,21;UBERON:0005795,8.03e-09,22;UBERON:0003975,8.03e-09,22;UBERON:0000920,7.76e-08,3;UBERON:0004175,7.84e-08,25;UBERON:0001870,8.29e-08,3;UBERON:0000077,7.93e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,8.30077214094655,7.91300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,8.79069957194152,11.6504807657348,11.1884408531982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3696911453106,7.42411702081597,29.7945881036255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,4.46601623624687,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.41023272848151,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0.275684698604535,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | |||
|short_description=p@chr18:6286777..6286797,+ | |||
}} |
Revision as of 18:27, 20 January 2014
Short description: | p@chr18:6286777..6286797, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:6286777..6286797, + |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.52e-83 | 19 |
placental epithelial cell | 4.46e-60 | 3 |
amniotic epithelial cell | 3.01e-40 | 2 |
amnion mesenchymal stem cell | 1.78e-36 | 5 |
chorionic membrane mesenchymal stem cell | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.31e-113 | 14 |
membranous layer | 2.31e-113 | 14 |
amnion | 1.44e-70 | 7 |
extraembryonic structure | 3.88e-66 | 24 |
somatic layer of lateral plate mesoderm | 8.25e-62 | 8 |
chorion | 1.77e-45 | 7 |
placenta | 2.66e-45 | 4 |
allantois | 2.66e-45 | 4 |
organ component layer | 6.09e-24 | 66 |
middle frontal gyrus | 4.52e-11 | 2 |
uterus | 3.26e-09 | 21 |
embryonic uterus | 8.03e-09 | 22 |
internal female genitalia | 8.03e-09 | 22 |
egg chorion | 7.76e-08 | 3 |
internal genitalia | 7.84e-08 | 25 |
frontal cortex | 8.29e-08 | 3 |
mixed endoderm/mesoderm-derived structure | 7.93e-07 | 29 |