FFCP PHASE1:Hg19::chr18:61442864..61442873,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8710 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13902 | |||
|TSSclassifier=not | |||
|UniProt=F5GZC0 | |||
|association_with_transcript=209bp_to_ENST00000540675_5end | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_15_at_SERPINB7_5end | |||
|id=chr18:61442864..61442873,+ | |||
|ontology_enrichment_celltype=CL:0002334!8.93e-16!12;CL:0002537!5.73e-15!5;CL:0002579!2.93e-11!3;CL:0002580!4.20e-11!3 | |||
|ontology_enrichment_celltype_v019=CL:0002537;1.70e-32;5!CL:0000349;2.26e-09;19!CL:0000138;5.54e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.70e-32,5;CL:0000349,2.26e-09,19;CL:0000058,5.54e-08,6;CL:0000138,5.54e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3371!1.60e-09!1;DOID:4549!1.60e-09!1;DOID:5861!1.60e-09!1;DOID:6496!1.60e-09!1;DOID:0060085!6.22e-09!1;DOID:3165!6.22e-09!1;DOID:0060121!6.22e-09!1;DOID:2438!6.22e-09!1;DOID:4418!6.22e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:3371;6.62e-41;1!DOID:4549;6.62e-41;1!DOID:5861;6.62e-41;1!DOID:6496;6.62e-41;1!DOID:4468;5.69e-21;2!DOID:201;5.54e-08;6!DOID:0060100;5.54e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,6.62e-41,1;DOID:4549,6.62e-41,1;DOID:5861,6.62e-41,1;DOID:6496,6.62e-41,1;DOID:4468,6.96e-21,2;DOID:201,5.54e-08,6;DOID:0060100,5.54e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0003688!3.67e-12!6;UBERON:0002358!3.67e-12!6;UBERON:0003684!3.67e-12!6;UBERON:0001178!3.67e-12!6;UBERON:0000305!7.67e-11!7;UBERON:0004923!1.35e-09!57;UBERON:0004871!1.51e-09!8;UBERON:0005631!3.95e-09!14;UBERON:0000158!3.95e-09!14;UBERON:0002146!5.31e-09!1;UBERON:0005623!5.31e-09!1;UBERON:0000310!1.75e-07!10;UBERON:0001443!7.66e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.44e-23;7!UBERON:0005631;7.51e-17;10!UBERON:0000158;7.51e-17;10!UBERON:0002418;1.22e-14;3!UBERON:0004755;1.22e-14;3!UBERON:0000478;1.27e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,1.44e-23,7;UBERON:0004871,8.98e-21,8;UBERON:0002418,1.22e-14,3;UBERON:0004755,1.22e-14,3;UBERON:0005631,2.37e-12,14;UBERON:0000158,2.37e-12,14;UBERON:0000478,1.27e-07,24 | |||
|phase1_expression=0,0.428201047781966,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558350568994769,0,0.292311015483596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0.511707249066704,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62618933211459,0.296964680832639,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05499032264014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64839210825602,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p15@SERPINB7 | |||
}} |
Revision as of 19:42, 20 January 2014
Short description: | p15@SERPINB7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_SERPINB7_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | 209bp_to_ENST00000540675_5end |
EntrezGene: | SERPINB7 |
HGNC: | 13902 |
UniProt: | F5GZC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.70e-32 | 5 |
extraembryonic cell | 2.26e-09 | 19 |
chondroblast | 5.54e-08 | 6 |
chondrocyte | 5.54e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
amnion | 1.44e-23 | 7 |
somatic layer of lateral plate mesoderm | 8.98e-21 | 8 |
cartilage tissue | 1.22e-14 | 3 |
skeletal tissue | 1.22e-14 | 3 |
extraembryonic membrane | 2.37e-12 | 14 |
membranous layer | 2.37e-12 | 14 |
extraembryonic structure | 1.27e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 6.62e-41 | 1 |
extraosseous chondrosarcoma | 6.62e-41 | 1 |
myxoid chondrosarcoma | 6.62e-41 | 1 |
extraskeletal myxoid chondrosarcoma | 6.62e-41 | 1 |
clear cell adenocarcinoma | 6.96e-21 | 2 |
connective tissue cancer | 5.54e-08 | 6 |
musculoskeletal system cancer | 5.54e-08 | 6 |